RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 BICC1Q9H694 974 aaKnown RBP12.5□□□□□ -0.41
HMGA1P6-201ENST00000418454 AOX1Q06278 1338 aa12.5□□□□□ -0.41
HMGA1P6-201ENST00000418454 KAT6BQ8WYB5 2073 aa12.5□□□□□ -0.41
HMGA1P6-201ENST00000418454 SURF6O75683 361 aaKnown RBP12.49□□□□□ -0.41
HMGA1P6-201ENST00000418454 CIAO1O76071 339 aa12.49□□□□□ -0.41
HMGA1P6-201ENST00000418454 HLFQ16534 295 aa12.49□□□□□ -0.41
HMGA1P6-201ENST00000418454 BMP2KLQ5H9B9 411 aa12.49□□□□□ -0.41
HMGA1P6-201ENST00000418454 UBE3BQ7Z3V4 1068 aa12.49□□□□□ -0.41
HMGA1P6-201ENST00000418454 UTP14AQ9BVJ6 771 aaKnown RBP12.49□□□□□ -0.41
HMGA1P6-201ENST00000418454 NYXQ9GZU5 481 aa12.49□□□□□ -0.41
HMGA1P6-201ENST00000418454 GPR108Q9NPR9 543 aa12.49□□□□□ -0.41
HMGA1P6-201ENST00000418454 STAP2Q9UGK3 403 aa12.49□□□□□ -0.41
HMGA1P6-201ENST00000418454 TBC1D2BQ9UPU7 963 aa12.49□□□□□ -0.41
HMGA1P6-201ENST00000418454 PDE8AO60658 829 aa12.48□□□□□ -0.41
HMGA1P6-201ENST00000418454 ZPR1O75312 459 aa12.48□□□□□ -0.41
HMGA1P6-201ENST00000418454 TRIM37O94972 964 aa12.48□□□□□ -0.41
HMGA1P6-201ENST00000418454 G3BP1Q13283 466 aaKnown RBP eCLIP12.48□□□□□ -0.41
HMGA1P6-201ENST00000418454 SLC10A5Q5PT55 438 aa12.48□□□□□ -0.41
HMGA1P6-201ENST00000418454 POTEAQ6S8J7 498 aa12.48□□□□□ -0.41
HMGA1P6-201ENST00000418454 PTF1AQ7RTS3 328 aa12.48□□□□□ -0.41
HMGA1P6-201ENST00000418454 CCDC125Q86Z20 511 aa12.48□□□□□ -0.41
HMGA1P6-201ENST00000418454 RHPN1Q8TCX5 695 aa12.48□□□□□ -0.41
HMGA1P6-201ENST00000418454 BACH2Q9BYV9 841 aa12.48□□□□□ -0.41
HMGA1P6-201ENST00000418454 RTL9Q8NET4 1388 aa12.47□□□□□ -0.41
HMGA1P6-201ENST00000418454 SH3TC1Q8TE82 1336 aa12.47□□□□□ -0.41
HMGA1P6-201ENST00000418454 BRWD3Q6RI45 1802 aa12.47□□□□□ -0.41
HMGA1P6-201ENST00000418454 PDE4AP27815 886 aa12.47□□□□□ -0.41
HMGA1P6-201ENST00000418454 RFX5P48382 616 aaPredicted RBP12.47□□□□□ -0.41
HMGA1P6-201ENST00000418454 TXNRD1Q16881 649 aa12.47□□□□□ -0.41
HMGA1P6-201ENST00000418454 FAM182BQ5T319 152 aa12.47□□□□□ -0.41
HMGA1P6-201ENST00000418454 CLASRPQ8N2M8 674 aaKnown RBP12.47□□□□□ -0.41
HMGA1P6-201ENST00000418454 LNPKQ9C0E8 428 aa12.47□□□□□ -0.41
HMGA1P6-201ENST00000418454 TRMT112Q9UI30 125 aaKnown RBP12.47□□□□□ -0.41
HMGA1P6-201ENST00000418454 ZNF330Q9Y3S2 320 aaPredicted RBP12.47□□□□□ -0.41
HMGA1P6-201ENST00000418454 RGPD3A6NKT7 1758 aaPredicted RBP12.46□□□□□ -0.41
HMGA1P6-201ENST00000418454 RGPD4Q7Z3J3 1758 aa12.46□□□□□ -0.41
HMGA1P6-201ENST00000418454 TTC41PQ6P2S7 1318 aa12.46□□□□□ -0.41
HMGA1P6-201ENST00000418454 USP42Q9H9J4 1324 aaKnown RBP12.46□□□□□ -0.41
HMGA1P6-201ENST00000418454 GNPATO15228 680 aa12.46□□□□□ -0.41
HMGA1P6-201ENST00000418454 IL15P40933 162 aaPredicted RBP12.46□□□□□ -0.41
HMGA1P6-201ENST00000418454 RGS3P49796 1198 aa12.46□□□□□ -0.41
HMGA1P6-201ENST00000418454 PTPN12Q05209 780 aaKnown RBP12.46□□□□□ -0.41
HMGA1P6-201ENST00000418454 LMBR1LQ6UX01 489 aa12.46□□□□□ -0.41
HMGA1P6-201ENST00000418454 PLEKHM2Q8IWE5 1019 aa12.46□□□□□ -0.41
HMGA1P6-201ENST00000418454 ARHGEF1Q92888 912 aaKnown RBP12.46□□□□□ -0.41
HMGA1P6-201ENST00000418454 ARXQ96QS3 562 aa12.46□□□□□ -0.41
HMGA1P6-201ENST00000418454 SALL3Q9BXA9 1300 aa12.45□□□□□ -0.42
HMGA1P6-201ENST00000418454 IRS4O14654 1257 aaPredicted RBP12.45□□□□□ -0.42
HMGA1P6-201ENST00000418454 APBA3O96018 575 aa12.45□□□□□ -0.42
HMGA1P6-201ENST00000418454 RFC4P35249 363 aa12.45□□□□□ -0.42
HMGA1P6-201ENST00000418454 CCDC57Q2TAC2 916 aa12.45□□□□□ -0.42
HMGA1P6-201ENST00000418454 EPHA10Q5JZY3 1008 aa12.45□□□□□ -0.42
HMGA1P6-201ENST00000418454 TPTE2Q6XPS3 522 aa12.45□□□□□ -0.42
HMGA1P6-201ENST00000418454 SETDB2Q96T68 719 aa12.45□□□□□ -0.42
HMGA1P6-201ENST00000418454 LRRC4BQ9NT99 713 aa12.45□□□□□ -0.42
HMGA1P6-201ENST00000418454 NIP7Q9Y221 180 aaKnown RBP eCLIP12.45□□□□□ -0.42
HMGA1P6-201ENST00000418454 EXOC6BQ9Y2D4 811 aa12.45□□□□□ -0.42
HMGA1P6-201ENST00000418454 C4BP0C0L5 1744 aa12.45□□□□□ -0.42
HMGA1P6-201ENST00000418454 ANKRD36CQ5JPF3 1778 aa12.44□□□□□ -0.42
HMGA1P6-201ENST00000418454 MYH14Q7Z406 1995 aaKnown RBP12.44□□□□□ -0.42
HMGA1P6-201ENST00000418454 IFIT5Q13325 482 aaKnown RBP12.44□□□□□ -0.42
HMGA1P6-201ENST00000418454 SUSD4Q5VX71 490 aa12.44□□□□□ -0.42
HMGA1P6-201ENST00000418454 PROM2Q8N271 834 aa12.44□□□□□ -0.42
HMGA1P6-201ENST00000418454 TTLL11Q8NHH1 800 aa12.44□□□□□ -0.42
HMGA1P6-201ENST00000418454 FAM89AQ96GI7 184 aa12.44□□□□□ -0.42
HMGA1P6-201ENST00000418454 GPATCH3Q96I76 525 aa12.44□□□□□ -0.42
HMGA1P6-201ENST00000418454 AFDNP55196 1824 aaKnown RBP12.44□□□□□ -0.42
HMGA1P6-201ENST00000418454 UBN2Q6ZU65 1347 aa12.43□□□□□ -0.42
HMGA1P6-201ENST00000418454 ERC2O15083 957 aa12.43□□□□□ -0.42
HMGA1P6-201ENST00000418454 NTSR2O95665 410 aa12.43□□□□□ -0.42
HMGA1P6-201ENST00000418454 PDE1AP54750 535 aa12.43□□□□□ -0.42
HMGA1P6-201ENST00000418454 CTSWP56202 376 aa12.43□□□□□ -0.42
HMGA1P6-201ENST00000418454 SF3B3Q15393 1217 aaKnown RBP12.43□□□□□ -0.42
HMGA1P6-201ENST00000418454 NUP98P52948 1817 aa12.43□□□□□ -0.42
HMGA1P6-201ENST00000418454 TAF1LQ8IZX4 1826 aa12.43□□□□□ -0.42
HMGA1P6-201ENST00000418454 ANKRD18BA2A2Z9 1011 aa12.42□□□□□ -0.42
HMGA1P6-201ENST00000418454 EYA2O00167 538 aa12.42□□□□□ -0.42
HMGA1P6-201ENST00000418454 MX1P20591 662 aa12.42□□□□□ -0.42
HMGA1P6-201ENST00000418454 OS9Q13438 667 aaPredicted RBP12.42□□□□□ -0.42
HMGA1P6-201ENST00000418454 CCDC152Q4G0S7 254 aa12.42□□□□□ -0.42
HMGA1P6-201ENST00000418454 TTC22Q5TAA0 569 aa12.42□□□□□ -0.42
HMGA1P6-201ENST00000418454 USPL1Q5W0Q7 1092 aa12.42□□□□□ -0.42
HMGA1P6-201ENST00000418454 AKT1S1Q96B36 256 aa12.42□□□□□ -0.42
HMGA1P6-201ENST00000418454 BCL2L12Q9HB09 334 aa12.42□□□□□ -0.42
HMGA1P6-201ENST00000418454 TSHZ2Q9NRE2 1034 aa12.42□□□□□ -0.42
HMGA1P6-201ENST00000418454 AKAP2Q9Y2D5 859 aa12.42□□□□□ -0.42
HMGA1P6-201ENST00000418454 BCORQ6W2J9 1755 aa12.42□□□□□ -0.42
HMGA1P6-201ENST00000418454 RIC1Q4ADV7 1423 aa12.42□□□□□ -0.42
HMGA1P6-201ENST00000418454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.41□□□□□ -0.42
HMGA1P6-201ENST00000418454 EPB41L2O43491 1005 aaKnown RBP12.41□□□□□ -0.42
HMGA1P6-201ENST00000418454 SASH1O94885 1247 aa12.41□□□□□ -0.42
HMGA1P6-201ENST00000418454 GPTP24298 496 aa12.41□□□□□ -0.42
HMGA1P6-201ENST00000418454 C8orf34Q49A92 452 aa12.41□□□□□ -0.42
HMGA1P6-201ENST00000418454 NLGN1Q8N2Q7 840 aa12.41□□□□□ -0.42
HMGA1P6-201ENST00000418454 IL27Q8NEV9 243 aa12.41□□□□□ -0.42
HMGA1P6-201ENST00000418454 ZBTB22O15209 634 aa12.4□□□□□ -0.42
HMGA1P6-201ENST00000418454 GLRX3O76003 335 aaKnown RBP12.4□□□□□ -0.42
HMGA1P6-201ENST00000418454 IFIT2P09913 472 aaKnown RBP12.4□□□□□ -0.42
HMGA1P6-201ENST00000418454 TM4SF1P30408 202 aa12.4□□□□□ -0.42
HMGA1P6-201ENST00000418454 CASC1Q6TDU7 716 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms