RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 PRAMEF22A3QJZ6 481 aa9.69□□□□□ -0.86
CASP4-202ENST00000417440 FAM177BA6PVY3 158 aa9.69□□□□□ -0.86
CASP4-202ENST00000417440 POTECB2RU33 542 aa9.69□□□□□ -0.86
CASP4-202ENST00000417440 DDNO94850 711 aaPredicted RBP9.69□□□□□ -0.86
CASP4-202ENST00000417440 HSPA1AP0DMV8 641 aaKnown RBP9.69□□□□□ -0.86
CASP4-202ENST00000417440 HSPA1BP0DMV9 641 aaKnown RBP9.69□□□□□ -0.86
CASP4-202ENST00000417440 PDE4AP27815 886 aa9.69□□□□□ -0.86
CASP4-202ENST00000417440 PRKAR2BP31323 418 aa9.69□□□□□ -0.86
CASP4-202ENST00000417440 ST5P78524 1137 aa9.69□□□□□ -0.86
CASP4-202ENST00000417440 PHACTR3Q96KR7 559 aa9.69□□□□□ -0.86
CASP4-202ENST00000417440 TMEM121BQ9BXQ6 578 aaPredicted RBP9.69□□□□□ -0.86
CASP4-202ENST00000417440 CRISPLD2Q9H0B8 497 aa9.69□□□□□ -0.86
CASP4-202ENST00000417440 USP16Q9Y5T5 823 aa9.69□□□□□ -0.86
CASP4-202ENST00000417440 CAMTA2O94983 1202 aa9.68□□□□□ -0.86
CASP4-202ENST00000417440 PRPF40BQ6NWY9 871 aaKnown RBP9.68□□□□□ -0.86
CASP4-202ENST00000417440 MCM10Q7L590 875 aa9.68□□□□□ -0.86
CASP4-202ENST00000417440 NBPF5PQ86XG9 351 aaPredicted RBP9.68□□□□□ -0.86
CASP4-202ENST00000417440 MICALL2Q8IY33 904 aa9.68□□□□□ -0.86
CASP4-202ENST00000417440 CNKSR1Q969H4 720 aa9.68□□□□□ -0.86
CASP4-202ENST00000417440 CFAP53Q96M91 514 aa9.68□□□□□ -0.86
CASP4-202ENST00000417440 TAOK3Q9H2K8 898 aa9.68□□□□□ -0.86
CASP4-202ENST00000417440 MKRN1Q9UHC7 482 aaKnown RBP9.68□□□□□ -0.86
CASP4-202ENST00000417440 PDZRN3Q9UPQ7 1066 aa9.68□□□□□ -0.86
CASP4-202ENST00000417440 SEC24BO95487 1268 aa9.67□□□□□ -0.86
CASP4-202ENST00000417440 POTEJP0CG39 1038 aa9.67□□□□□ -0.86
CASP4-202ENST00000417440 U2AF1L5P0DN76 240 aaPredicted RBP9.67□□□□□ -0.86
CASP4-202ENST00000417440 SRGNP10124 158 aa9.67□□□□□ -0.86
CASP4-202ENST00000417440 U2AF1Q01081 240 aaKnown RBP eCLIP9.67□□□□□ -0.86
CASP4-202ENST00000417440 MFSD10Q14728 455 aa9.67□□□□□ -0.86
CASP4-202ENST00000417440 STYK1Q6J9G0 422 aa9.67□□□□□ -0.86
CASP4-202ENST00000417440 RTF1Q92541 710 aaKnown RBP9.67□□□□□ -0.86
CASP4-202ENST00000417440 COLQQ9Y215 455 aaPredicted RBP9.67□□□□□ -0.86
CASP4-202ENST00000417440 AFDNP55196 1824 aaKnown RBP9.66□□□□□ -0.86
CASP4-202ENST00000417440 DCTN1Q14203 1278 aa9.66□□□□□ -0.86
CASP4-202ENST00000417440 NGEFQ8N5V2 710 aa9.66□□□□□ -0.86
CASP4-202ENST00000417440 MASTLQ96GX5 879 aa9.66□□□□□ -0.86
CASP4-202ENST00000417440 L3MBTL3Q96JM7 780 aaPredicted RBP9.66□□□□□ -0.86
CASP4-202ENST00000417440 RSPH6AQ9H0K4 717 aa9.66□□□□□ -0.86
CASP4-202ENST00000417440 BOLA1Q9Y3E2 137 aa9.66□□□□□ -0.86
CASP4-202ENST00000417440 TNRC6CQ9HCJ0 1690 aaKnown RBP9.66□□□□□ -0.86
CASP4-202ENST00000417440 EAPPQ56P03 285 aaPredicted RBP9.65□□□□□ -0.86
CASP4-202ENST00000417440 OLFM4Q6UX06 510 aa9.65□□□□□ -0.86
CASP4-202ENST00000417440 MIS18AQ9NYP9 233 aa9.65□□□□□ -0.86
CASP4-202ENST00000417440 NIP7Q9Y221 180 aaKnown RBP eCLIP9.65□□□□□ -0.86
CASP4-202ENST00000417440 NUDCQ9Y266 331 aa9.65□□□□□ -0.86
CASP4-202ENST00000417440 SBF1O95248 1867 aa9.65□□□□□ -0.86
CASP4-202ENST00000417440 COL3A1P02461 1466 aaPredicted RBP9.65□□□□□ -0.87
CASP4-202ENST00000417440 NRXN2Q9P2S2 1712 aa9.65□□□□□ -0.87
CASP4-202ENST00000417440 POTEFA5A3E0 1075 aa9.64□□□□□ -0.87
CASP4-202ENST00000417440 SNRPA1P09661 255 aaKnown RBP9.64□□□□□ -0.87
CASP4-202ENST00000417440 NPR1P16066 1061 aa9.64□□□□□ -0.87
CASP4-202ENST00000417440 GTF2E1P29083 439 aaPredicted RBP9.64□□□□□ -0.87
CASP4-202ENST00000417440 CCDC93Q567U6 631 aa9.64□□□□□ -0.87
CASP4-202ENST00000417440 SOGA3Q5TF21 947 aa9.64□□□□□ -0.87
CASP4-202ENST00000417440 LARP6Q9BRS8 491 aaKnown RBP9.64□□□□□ -0.87
CASP4-202ENST00000417440 ZNF277Q9NRM2 450 aaPredicted RBP9.64□□□□□ -0.87
CASP4-202ENST00000417440 METRNQ9UJH8 293 aa9.64□□□□□ -0.87
CASP4-202ENST00000417440 ZNF652Q9Y2D9 606 aa9.64□□□□□ -0.87
CASP4-202ENST00000417440 CEMIPQ8WUJ3 1361 aa9.63□□□□□ -0.87
CASP4-202ENST00000417440 LTBP3Q9NS15 1303 aa9.63□□□□□ -0.87
CASP4-202ENST00000417440 HLFQ16534 295 aa9.63□□□□□ -0.87
CASP4-202ENST00000417440 TPTE2Q6XPS3 522 aa9.63□□□□□ -0.87
CASP4-202ENST00000417440 GPHNQ9NQX3 736 aaPredicted RBP9.63□□□□□ -0.87
CASP4-202ENST00000417440 PCNTO95613 3336 aa9.62□□□□□ -0.87
CASP4-202ENST00000417440 IQCA1LA6NCM1 817 aa9.62□□□□□ -0.87
CASP4-202ENST00000417440 NBPF26B4DH59 902 aa9.62□□□□□ -0.87
CASP4-202ENST00000417440 PPP2R1AP30153 589 aa9.62□□□□□ -0.87
CASP4-202ENST00000417440 FKBP4Q02790 459 aaKnown RBP eCLIP9.62□□□□□ -0.87
CASP4-202ENST00000417440 NBPF10Q6P3W6 841 aaKnown RBP9.62□□□□□ -0.87
CASP4-202ENST00000417440 CLEC4GQ6UXB4 293 aa9.62□□□□□ -0.87
CASP4-202ENST00000417440 NBPF15Q8N660 670 aa9.62□□□□□ -0.87
CASP4-202ENST00000417440 C7orf43Q8WVR3 580 aa9.62□□□□□ -0.87
CASP4-202ENST00000417440 TAF1DQ9H5J8 278 aaPredicted RBP9.62□□□□□ -0.87
CASP4-202ENST00000417440 UBR2Q8IWV8 1755 aa9.62□□□□□ -0.87
CASP4-202ENST00000417440 TIAM2Q8IVF5 1701 aa9.62□□□□□ -0.87
CASP4-202ENST00000417440 NPC1L1Q9UHC9 1359 aa9.62□□□□□ -0.87
CASP4-202ENST00000417440 ZNF541Q9H0D2 1346 aa9.61□□□□□ -0.87
CASP4-202ENST00000417440 DLEC1Q9Y238 1755 aa9.61□□□□□ -0.87
CASP4-202ENST00000417440 G3V3G9 751 aa9.61□□□□□ -0.87
CASP4-202ENST00000417440 TCERG1O14776 1098 aaKnown RBP9.61□□□□□ -0.87
CASP4-202ENST00000417440 NBR1Q14596 966 aa9.61□□□□□ -0.87
CASP4-202ENST00000417440 E2F4Q16254 413 aa9.61□□□□□ -0.87
CASP4-202ENST00000417440 LDHDQ86WU2 507 aa9.61□□□□□ -0.87
CASP4-202ENST00000417440 NUTM1Q86Y26 1132 aa9.61□□□□□ -0.87
CASP4-202ENST00000417440 SYNE4Q8N205 404 aa9.61□□□□□ -0.87
CASP4-202ENST00000417440 KCNV2Q8TDN2 545 aa9.61□□□□□ -0.87
CASP4-202ENST00000417440 RRP7AQ9Y3A4 280 aaKnown RBP9.61□□□□□ -0.87
CASP4-202ENST00000417440 ANKRD31Q8N7Z5 1873 aa9.61□□□□□ -0.87
CASP4-202ENST00000417440 COL11A2P13942 1736 aaPredicted RBP9.6□□□□□ -0.87
CASP4-202ENST00000417440 FOXN1O15353 648 aa9.6□□□□□ -0.87
CASP4-202ENST00000417440 NEFMP07197 916 aa9.6□□□□□ -0.87
CASP4-202ENST00000417440 MYL6BP14649 208 aa9.6□□□□□ -0.87
CASP4-202ENST00000417440 TAF7Q15545 349 aaPredicted RBP9.6□□□□□ -0.87
CASP4-202ENST00000417440 RTKN2Q8IZC4 609 aa9.6□□□□□ -0.87
CASP4-202ENST00000417440 DDX27Q96GQ7 796 aaKnown RBP9.6□□□□□ -0.87
CASP4-202ENST00000417440 HACL1Q9UJ83 578 aa9.6□□□□□ -0.87
CASP4-202ENST00000417440 GJA3Q9Y6H8 435 aa9.6□□□□□ -0.87
CASP4-202ENST00000417440 SCN7AQ01118 1682 aa9.6□□□□□ -0.87
CASP4-202ENST00000417440 RNF123Q5XPI4 1314 aa9.59□□□□□ -0.87
CASP4-202ENST00000417440 VIRMAQ69YN4 1812 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms