RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 GSPT1P15170 499 aaKnown RBP22.27■■□□□ 1.16
RTN4R-202ENST00000416372 OSBPL3Q9H4L5 887 aa22.27■■□□□ 1.16
RTN4R-202ENST00000416372 MX1P20591 662 aa22.26■■□□□ 1.15
RTN4R-202ENST00000416372 G3BP1Q13283 466 aaKnown RBP eCLIP22.26■■□□□ 1.15
RTN4R-202ENST00000416372 ANKRD36CQ5JPF3 1778 aa22.26■■□□□ 1.15
RTN4R-202ENST00000416372 MYH14Q7Z406 1995 aaKnown RBP22.26■■□□□ 1.15
RTN4R-202ENST00000416372 SALL3Q9BXA9 1300 aa22.26■■□□□ 1.15
RTN4R-202ENST00000416372 SBF2Q86WG5 1849 aa22.26■■□□□ 1.15
RTN4R-202ENST00000416372 FOXO4P98177 505 aa22.25■■□□□ 1.15
RTN4R-202ENST00000416372 UPF2Q9HAU5 1272 aaKnown RBP22.25■■□□□ 1.15
RTN4R-202ENST00000416372 NUP98P52948 1817 aa22.25■■□□□ 1.15
RTN4R-202ENST00000416372 GPTP24298 496 aa22.25■■□□□ 1.15
RTN4R-202ENST00000416372 LMBR1LQ6UX01 489 aa22.25■■□□□ 1.15
RTN4R-202ENST00000416372 LINC00116Q8NCU8 138 aa22.25■■□□□ 1.15
RTN4R-202ENST00000416372 PCCAP05165 728 aaPredicted RBP22.24■■□□□ 1.15
RTN4R-202ENST00000416372 NLRP10Q86W26 655 aa22.23■■□□□ 1.15
RTN4R-202ENST00000416372 NUTM1Q86Y26 1132 aa22.23■■□□□ 1.15
RTN4R-202ENST00000416372 SIL1Q9H173 461 aa22.23■■□□□ 1.15
RTN4R-202ENST00000416372 STAP2Q9UGK3 403 aa22.23■■□□□ 1.15
RTN4R-202ENST00000416372 CHMP3Q9Y3E7 222 aa22.23■■□□□ 1.15
RTN4R-202ENST00000416372 KCNQ4P56696 695 aa22.22■■□□□ 1.15
RTN4R-202ENST00000416372 ZBTB38Q8NAP3 1195 aaPredicted RBP22.22■■□□□ 1.15
RTN4R-202ENST00000416372 COPRSQ9NQ92 184 aa22.22■■□□□ 1.15
RTN4R-202ENST00000416372 CDC45O75419 566 aa22.22■■□□□ 1.15
RTN4R-202ENST00000416372 RFX5P48382 616 aaPredicted RBP22.22■■□□□ 1.15
RTN4R-202ENST00000416372 ZNF772Q68DY9 489 aaPredicted RBP22.22■■□□□ 1.15
RTN4R-202ENST00000416372 CLASRPQ8N2M8 674 aaKnown RBP22.22■■□□□ 1.15
RTN4R-202ENST00000416372 KLHDC4Q8TBB5 520 aa22.22■■□□□ 1.15
RTN4R-202ENST00000416372 TSHZ3Q63HK5 1081 aa22.21■■□□□ 1.15
RTN4R-202ENST00000416372 FAM89AQ96GI7 184 aa22.21■■□□□ 1.15
RTN4R-202ENST00000416372 AOX1Q06278 1338 aa22.21■■□□□ 1.15
RTN4R-202ENST00000416372 CNTNAP4Q9C0A0 1308 aa22.21■■□□□ 1.15
RTN4R-202ENST00000416372 SDSP20132 328 aa22.2■■□□□ 1.14
RTN4R-202ENST00000416372 KRT27Q7Z3Y8 459 aa22.2■■□□□ 1.14
RTN4R-202ENST00000416372 CCNL1Q9UK58 526 aaPredicted RBP22.2■■□□□ 1.14
RTN4R-202ENST00000416372 BRWD3Q6RI45 1802 aa22.2■■□□□ 1.14
RTN4R-202ENST00000416372 CAMTA2O94983 1202 aa22.2■■□□□ 1.14
RTN4R-202ENST00000416372 MFAP1P55081 439 aaKnown RBP22.2■■□□□ 1.14
RTN4R-202ENST00000416372 PTPN12Q05209 780 aaKnown RBP22.2■■□□□ 1.14
RTN4R-202ENST00000416372 TBC1D9Q6ZT07 1266 aa22.2■■□□□ 1.14
RTN4R-202ENST00000416372 ZNF34Q8IZ26 560 aa22.2■■□□□ 1.14
RTN4R-202ENST00000416372 BCL11BQ9C0K0 894 aaPredicted RBP22.2■■□□□ 1.14
RTN4R-202ENST00000416372 SASH1O94885 1247 aa22.19■■□□□ 1.14
RTN4R-202ENST00000416372 RBM6P78332 1123 aaKnown RBP22.18■■□□□ 1.14
RTN4R-202ENST00000416372 RC3H1Q5TC82 1133 aaKnown RBP22.18■■□□□ 1.14
RTN4R-202ENST00000416372 FAM196AQ6ZSG2 479 aa22.18■■□□□ 1.14
RTN4R-202ENST00000416372 TRMT112Q9UI30 125 aaKnown RBP22.18■■□□□ 1.14
RTN4R-202ENST00000416372 CDHR2Q9BYE9 1310 aa22.18■■□□□ 1.14
RTN4R-202ENST00000416372 LY75O60449 1722 aa22.18■■□□□ 1.14
RTN4R-202ENST00000416372 IPO9Q96P70 1041 aaKnown RBP22.17■■□□□ 1.14
RTN4R-202ENST00000416372 PLA2G12BQ9BX93 195 aa22.17■■□□□ 1.14
RTN4R-202ENST00000416372 IFIT2P09913 472 aaKnown RBP22.17■■□□□ 1.14
RTN4R-202ENST00000416372 UBN2Q6ZU65 1347 aa22.16■■□□□ 1.14
RTN4R-202ENST00000416372 AACSQ86V21 672 aa22.16■■□□□ 1.14
RTN4R-202ENST00000416372 SOCS7O14512 581 aa22.15■■□□□ 1.14
RTN4R-202ENST00000416372 CASC1Q6TDU7 716 aa22.15■■□□□ 1.14
RTN4R-202ENST00000416372 ZNF652Q9Y2D9 606 aa22.15■■□□□ 1.14
RTN4R-202ENST00000416372 SYNE4Q8N205 404 aa22.15■■□□□ 1.14
RTN4R-202ENST00000416372 GPATCH3Q96I76 525 aa22.15■■□□□ 1.14
RTN4R-202ENST00000416372 TBC1D32Q96NH3 1257 aa22.15■■□□□ 1.14
RTN4R-202ENST00000416372 TUBGCP6Q96RT7 1819 aa22.14■■□□□ 1.13
RTN4R-202ENST00000416372 USP42Q9H9J4 1324 aaKnown RBP22.14■■□□□ 1.13
RTN4R-202ENST00000416372 RPS6KA4O75676 772 aa22.14■■□□□ 1.13
RTN4R-202ENST00000416372 DDRGK1Q96HY6 314 aa22.14■■□□□ 1.13
RTN4R-202ENST00000416372 BCORQ6W2J9 1755 aa22.14■■□□□ 1.13
RTN4R-202ENST00000416372 TTC41PQ6P2S7 1318 aa22.13■■□□□ 1.13
RTN4R-202ENST00000416372 TRIM6-TRIM34B2RNG4 842 aa22.13■■□□□ 1.13
RTN4R-202ENST00000416372 IRS4O14654 1257 aaPredicted RBP22.13■■□□□ 1.13
RTN4R-202ENST00000416372 EIF5BO60841 1220 aaKnown RBP22.13■■□□□ 1.13
RTN4R-202ENST00000416372 CCDC57Q2TAC2 916 aa22.13■■□□□ 1.13
RTN4R-202ENST00000416372 PARP10Q53GL7 1025 aa22.13■■□□□ 1.13
RTN4R-202ENST00000416372 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.13■■□□□ 1.13
RTN4R-202ENST00000416372 TAF1LQ8IZX4 1826 aa22.13■■□□□ 1.13
RTN4R-202ENST00000416372 GNPATO15228 680 aa22.12■■□□□ 1.13
RTN4R-202ENST00000416372 SUSD4Q5VX71 490 aa22.12■■□□□ 1.13
RTN4R-202ENST00000416372 PI4K2BQ8TCG2 481 aa22.12■■□□□ 1.13
RTN4R-202ENST00000416372 EAF2Q96CJ1 260 aaPredicted RBP22.12■■□□□ 1.13
RTN4R-202ENST00000416372 CSF1RP07333 972 aa22.12■■□□□ 1.13
RTN4R-202ENST00000416372 TFCP2Q12800 502 aa22.12■■□□□ 1.13
RTN4R-202ENST00000416372 CLEC4GQ6UXB4 293 aa22.12■■□□□ 1.13
RTN4R-202ENST00000416372 RILPL2Q969X0 211 aa22.12■■□□□ 1.13
RTN4R-202ENST00000416372 UTP14AQ9BVJ6 771 aaKnown RBP22.12■■□□□ 1.13
RTN4R-202ENST00000416372 C22orf23Q9BZE7 217 aa22.12■■□□□ 1.13
RTN4R-202ENST00000416372 ECHDC1Q9NTX5 307 aa22.12■■□□□ 1.13
RTN4R-202ENST00000416372 NIP7Q9Y221 180 aaKnown RBP eCLIP22.12■■□□□ 1.13
RTN4R-202ENST00000416372 ERC2O15083 957 aa22.11■■□□□ 1.13
RTN4R-202ENST00000416372 CCDC8Q9H0W5 538 aaPredicted RBP22.11■■□□□ 1.13
RTN4R-202ENST00000416372 FAM177BA6PVY3 158 aa22.1■■□□□ 1.13
RTN4R-202ENST00000416372 GLRX3O76003 335 aaKnown RBP22.1■■□□□ 1.13
RTN4R-202ENST00000416372 CTSWP56202 376 aa22.1■■□□□ 1.13
RTN4R-202ENST00000416372 ZNF594Q96JF6 807 aaPredicted RBP22.1■■□□□ 1.13
RTN4R-202ENST00000416372 CCDC85AQ96PX6 553 aaPredicted RBP22.1■■□□□ 1.13
RTN4R-202ENST00000416372 RGS17Q9UGC6 210 aaPredicted RBP22.1■■□□□ 1.13
RTN4R-202ENST00000416372 RTCBQ9Y3I0 505 aaKnown RBP22.1■■□□□ 1.13
RTN4R-202ENST00000416372 SH3TC1Q8TE82 1336 aa22.1■■□□□ 1.13
RTN4R-202ENST00000416372 PDE8AO60658 829 aa22.1■■□□□ 1.13
RTN4R-202ENST00000416372 TRIM37O94972 964 aa22.1■■□□□ 1.13
RTN4R-202ENST00000416372 IFIT5Q13325 482 aaKnown RBP22.1■■□□□ 1.13
RTN4R-202ENST00000416372 MYH3P11055 1940 aa22.09■■□□□ 1.13
RTN4R-202ENST00000416372 EYA2O00167 538 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms