RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 TXNRD1Q16881 649 aa17.7■□□□□ 0.42
HMGA1P1-201ENST00000415560 CHD1LQ86WJ1 897 aa17.7■□□□□ 0.42
HMGA1P1-201ENST00000415560 ZBTB38Q8NAP3 1195 aaPredicted RBP17.7■□□□□ 0.42
HMGA1P1-201ENST00000415560 NARFQ9UHQ1 456 aa17.7■□□□□ 0.42
HMGA1P1-201ENST00000415560 NLRP10Q86W26 655 aa17.69■□□□□ 0.42
HMGA1P1-201ENST00000415560 BICC1Q9H694 974 aaKnown RBP17.69■□□□□ 0.42
HMGA1P1-201ENST00000415560 SURF6O75683 361 aaKnown RBP17.68■□□□□ 0.42
HMGA1P1-201ENST00000415560 GPTP24298 496 aa17.68■□□□□ 0.42
HMGA1P1-201ENST00000415560 RFC4P35249 363 aa17.68■□□□□ 0.42
HMGA1P1-201ENST00000415560 CASP7P55210 303 aa17.68■□□□□ 0.42
HMGA1P1-201ENST00000415560 SF3B2Q13435 895 aaKnown RBP17.68■□□□□ 0.42
HMGA1P1-201ENST00000415560 LRRC4BQ9NT99 713 aa17.68■□□□□ 0.42
HMGA1P1-201ENST00000415560 TRMT112Q9UI30 125 aaKnown RBP17.68■□□□□ 0.42
HMGA1P1-201ENST00000415560 CDHR2Q9BYE9 1310 aa17.68■□□□□ 0.42
HMGA1P1-201ENST00000415560 BCORQ6W2J9 1755 aa17.66■□□□□ 0.42
HMGA1P1-201ENST00000415560 G3BP1Q13283 466 aaKnown RBP eCLIP17.66■□□□□ 0.42
HMGA1P1-201ENST00000415560 RABL6Q3YEC7 729 aaPredicted RBP17.66■□□□□ 0.42
HMGA1P1-201ENST00000415560 ERC1Q8IUD2 1116 aa17.66■□□□□ 0.42
HMGA1P1-201ENST00000415560 JARID2Q92833 1246 aaPredicted RBP17.66■□□□□ 0.42
HMGA1P1-201ENST00000415560 ARHGEF1Q92888 912 aaKnown RBP17.66■□□□□ 0.42
HMGA1P1-201ENST00000415560 KAZALD1Q96I82 304 aa17.66■□□□□ 0.42
HMGA1P1-201ENST00000415560 UTP14AQ9BVJ6 771 aaKnown RBP17.66■□□□□ 0.42
HMGA1P1-201ENST00000415560 LRRCC1Q9C099 1032 aa17.66■□□□□ 0.42
HMGA1P1-201ENST00000415560 NIP7Q9Y221 180 aaKnown RBP eCLIP17.66■□□□□ 0.42
HMGA1P1-201ENST00000415560 SSFA2P28290 1259 aa17.65■□□□□ 0.42
HMGA1P1-201ENST00000415560 OS9Q13438 667 aaPredicted RBP17.65■□□□□ 0.42
HMGA1P1-201ENST00000415560 RTL5Q5HYW3 569 aaPredicted RBP17.65■□□□□ 0.42
HMGA1P1-201ENST00000415560 USPL1Q5W0Q7 1092 aa17.65■□□□□ 0.42
HMGA1P1-201ENST00000415560 FAM89AQ96GI7 184 aa17.65■□□□□ 0.42
HMGA1P1-201ENST00000415560 PLA2G12BQ9BX93 195 aa17.65■□□□□ 0.42
HMGA1P1-201ENST00000415560 LNPKQ9C0E8 428 aa17.65■□□□□ 0.42
HMGA1P1-201ENST00000415560 EXOC6BQ9Y2D4 811 aa17.65■□□□□ 0.42
HMGA1P1-201ENST00000415560 NOP58Q9Y2X3 529 aaKnown RBP17.65■□□□□ 0.42
HMGA1P1-201ENST00000415560 FOXO4P98177 505 aa17.64■□□□□ 0.41
HMGA1P1-201ENST00000415560 LMBR1LQ6UX01 489 aa17.64■□□□□ 0.41
HMGA1P1-201ENST00000415560 FLAD1Q8NFF5 587 aa17.64■□□□□ 0.41
HMGA1P1-201ENST00000415560 CHMP3Q9Y3E7 222 aa17.64■□□□□ 0.41
HMGA1P1-201ENST00000415560 RGPD3A6NKT7 1758 aaPredicted RBP17.63■□□□□ 0.41
HMGA1P1-201ENST00000415560 RGPD4Q7Z3J3 1758 aa17.63■□□□□ 0.41
HMGA1P1-201ENST00000415560 APBB1O00213 710 aa17.63■□□□□ 0.41
HMGA1P1-201ENST00000415560 PDE8AO60658 829 aa17.63■□□□□ 0.41
HMGA1P1-201ENST00000415560 PHF14O94880 888 aa17.63■□□□□ 0.41
HMGA1P1-201ENST00000415560 EPHA10Q5JZY3 1008 aa17.63■□□□□ 0.41
HMGA1P1-201ENST00000415560 PROM2Q8N271 834 aa17.63■□□□□ 0.41
HMGA1P1-201ENST00000415560 KIF1BPQ96EK5 621 aa17.63■□□□□ 0.41
HMGA1P1-201ENST00000415560 SETDB2Q96T68 719 aa17.63■□□□□ 0.41
HMGA1P1-201ENST00000415560 NYXQ9GZU5 481 aa17.63■□□□□ 0.41
HMGA1P1-201ENST00000415560 SH3TC1Q8TE82 1336 aa17.63■□□□□ 0.41
HMGA1P1-201ENST00000415560 TNS1Q9HBL0 1735 aaKnown RBP17.62■□□□□ 0.41
HMGA1P1-201ENST00000415560 IRS4O14654 1257 aaPredicted RBP17.62■□□□□ 0.41
HMGA1P1-201ENST00000415560 SUSD4Q5VX71 490 aa17.62■□□□□ 0.41
HMGA1P1-201ENST00000415560 UBR3Q6ZT12 1888 aa17.61■□□□□ 0.41
HMGA1P1-201ENST00000415560 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.61■□□□□ 0.41
HMGA1P1-201ENST00000415560 GTF2E1P29083 439 aaPredicted RBP17.61■□□□□ 0.41
HMGA1P1-201ENST00000415560 BAG6P46379 1132 aa17.61■□□□□ 0.41
HMGA1P1-201ENST00000415560 CCDC57Q2TAC2 916 aa17.61■□□□□ 0.41
HMGA1P1-201ENST00000415560 COPRSQ9NQ92 184 aa17.61■□□□□ 0.41
HMGA1P1-201ENST00000415560 TFCP2L1Q9NZI6 479 aa17.61■□□□□ 0.41
HMGA1P1-201ENST00000415560 UBN2Q6ZU65 1347 aa17.61■□□□□ 0.41
HMGA1P1-201ENST00000415560 SCN7AQ01118 1682 aa17.61■□□□□ 0.41
HMGA1P1-201ENST00000415560 CSF1RP07333 972 aa17.6■□□□□ 0.41
HMGA1P1-201ENST00000415560 CCDC125Q86Z20 511 aa17.6■□□□□ 0.41
HMGA1P1-201ENST00000415560 RHPN1Q8TCX5 695 aa17.6■□□□□ 0.41
HMGA1P1-201ENST00000415560 SRP68Q9UHB9 627 aaKnown RBP17.6■□□□□ 0.41
HMGA1P1-201ENST00000415560 USP42Q9H9J4 1324 aaKnown RBP17.6■□□□□ 0.41
HMGA1P1-201ENST00000415560 MYH3P11055 1940 aa17.59■□□□□ 0.41
HMGA1P1-201ENST00000415560 FAM177BA6PVY3 158 aa17.59■□□□□ 0.41
HMGA1P1-201ENST00000415560 PDE4AP27815 886 aa17.59■□□□□ 0.41
HMGA1P1-201ENST00000415560 TBC1D9BQ66K14 1250 aa17.59■□□□□ 0.41
HMGA1P1-201ENST00000415560 TPTE2Q6XPS3 522 aa17.59■□□□□ 0.41
HMGA1P1-201ENST00000415560 BICDL1Q6ZP65 573 aa17.59■□□□□ 0.41
HMGA1P1-201ENST00000415560 SKAP1Q86WV1 359 aa17.59■□□□□ 0.41
HMGA1P1-201ENST00000415560 BCL2L12Q9HB09 334 aa17.59■□□□□ 0.41
HMGA1P1-201ENST00000415560 SMARCA5O60264 1052 aaPredicted RBP17.58■□□□□ 0.4
HMGA1P1-201ENST00000415560 IFIT5Q13325 482 aaKnown RBP17.58■□□□□ 0.4
HMGA1P1-201ENST00000415560 TAF7LQ5H9L4 462 aa17.58■□□□□ 0.4
HMGA1P1-201ENST00000415560 CLASRPQ8N2M8 674 aaKnown RBP17.58■□□□□ 0.4
HMGA1P1-201ENST00000415560 FBXO3Q9UK99 471 aa17.58■□□□□ 0.4
HMGA1P1-201ENST00000415560 ANKRD18BA2A2Z9 1011 aa17.57■□□□□ 0.4
HMGA1P1-201ENST00000415560 NTSR2O95665 410 aa17.57■□□□□ 0.4
HMGA1P1-201ENST00000415560 RFX5P48382 616 aaPredicted RBP17.57■□□□□ 0.4
HMGA1P1-201ENST00000415560 CTSWP56202 376 aa17.57■□□□□ 0.4
HMGA1P1-201ENST00000415560 PTPN12Q05209 780 aaKnown RBP17.57■□□□□ 0.4
HMGA1P1-201ENST00000415560 SMIM5Q71RC9 77 aa17.57■□□□□ 0.4
HMGA1P1-201ENST00000415560 AKT1S1Q96B36 256 aa17.57■□□□□ 0.4
HMGA1P1-201ENST00000415560 BCL11AQ9H165 835 aa17.57■□□□□ 0.4
HMGA1P1-201ENST00000415560 PA2G4Q9UQ80 394 aaKnown RBP17.57■□□□□ 0.4
HMGA1P1-201ENST00000415560 C4AP0C0L4 1744 aa17.57■□□□□ 0.4
HMGA1P1-201ENST00000415560 NPHP1O15259 732 aa17.56■□□□□ 0.4
HMGA1P1-201ENST00000415560 EN1Q05925 392 aaPredicted RBP17.56■□□□□ 0.4
HMGA1P1-201ENST00000415560 NBPF5PQ86XG9 351 aaPredicted RBP17.56■□□□□ 0.4
HMGA1P1-201ENST00000415560 TTLL11Q8NHH1 800 aa17.56■□□□□ 0.4
HMGA1P1-201ENST00000415560 CAMKK2Q96RR4 588 aa17.56■□□□□ 0.4
HMGA1P1-201ENST00000415560 MSH5O43196 834 aa17.55■□□□□ 0.4
HMGA1P1-201ENST00000415560 EZH2Q15910 746 aaKnown RBP17.55■□□□□ 0.4
HMGA1P1-201ENST00000415560 FAM161AQ3B820 660 aa17.55■□□□□ 0.4
HMGA1P1-201ENST00000415560 CCDC152Q4G0S7 254 aa17.55■□□□□ 0.4
HMGA1P1-201ENST00000415560 SLC10A5Q5PT55 438 aa17.55■□□□□ 0.4
HMGA1P1-201ENST00000415560 PLEKHM2Q8IWE5 1019 aa17.55■□□□□ 0.4
HMGA1P1-201ENST00000415560 SIL1Q9H173 461 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms