RNA–Protein interactions for RNA: ENST00000415251.6

PHTF2-204, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 1,738 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-204ENST00000415251 CASZ1Q86V15 1759 aa17.36■□□□□ 0.37
PHTF2-204ENST00000415251 RGL2O15211 777 aa17.35■□□□□ 0.37
PHTF2-204ENST00000415251 CCT4P50991 539 aaKnown RBP17.35■□□□□ 0.37
PHTF2-204ENST00000415251 GCKRQ14397 625 aa17.35■□□□□ 0.37
PHTF2-204ENST00000415251 CCDC191Q8NCU4 936 aa17.35■□□□□ 0.37
PHTF2-204ENST00000415251 CWC25Q9NXE8 425 aaPredicted RBP17.35■□□□□ 0.37
PHTF2-204ENST00000415251 POLRMTO00411 1230 aaKnown RBP17.35■□□□□ 0.37
PHTF2-204ENST00000415251 NUTM1Q86Y26 1132 aa17.35■□□□□ 0.37
PHTF2-204ENST00000415251 FAM89AQ96GI7 184 aa17.35■□□□□ 0.37
PHTF2-204ENST00000415251 MTFR1LQ9H019 292 aa17.35■□□□□ 0.37
PHTF2-204ENST00000415251 USP44Q9H0E7 712 aa17.35■□□□□ 0.37
PHTF2-204ENST00000415251 ALDH1L1O75891 902 aa17.34■□□□□ 0.37
PHTF2-204ENST00000415251 SERPINB2P05120 415 aa17.34■□□□□ 0.37
PHTF2-204ENST00000415251 NBPF7P0C2Y1 421 aaPredicted RBP17.34■□□□□ 0.37
PHTF2-204ENST00000415251 AFDNP55196 1824 aaKnown RBP17.34■□□□□ 0.37
PHTF2-204ENST00000415251 ANKRD36CQ5JPF3 1778 aa17.34■□□□□ 0.37
PHTF2-204ENST00000415251 TRMT112Q9UI30 125 aaKnown RBP17.34■□□□□ 0.37
PHTF2-204ENST00000415251 MS4A1P11836 297 aa17.33■□□□□ 0.37
PHTF2-204ENST00000415251 PARP10Q53GL7 1025 aa17.33■□□□□ 0.37
PHTF2-204ENST00000415251 NBPF5PQ86XG9 351 aaPredicted RBP17.33■□□□□ 0.37
PHTF2-204ENST00000415251 MEIS3Q99687 375 aa17.33■□□□□ 0.37
PHTF2-204ENST00000415251 NTSR2O95665 410 aa17.33■□□□□ 0.36
PHTF2-204ENST00000415251 MVPQ14764 893 aaKnown RBP17.33■□□□□ 0.36
PHTF2-204ENST00000415251 UBE3BQ7Z3V4 1068 aa17.33■□□□□ 0.36
PHTF2-204ENST00000415251 CRBNQ96SW2 442 aa17.33■□□□□ 0.36
PHTF2-204ENST00000415251 UTP14AQ9BVJ6 771 aaKnown RBP17.33■□□□□ 0.36
PHTF2-204ENST00000415251 C9orf78Q9NZ63 289 aaPredicted RBP17.33■□□□□ 0.36
PHTF2-204ENST00000415251 PPP1R42Q7Z4L9 355 aa17.32■□□□□ 0.36
PHTF2-204ENST00000415251 PARP3Q9Y6F1 533 aa17.32■□□□□ 0.36
PHTF2-204ENST00000415251 PXDNLA1KZ92 1463 aa17.31■□□□□ 0.36
PHTF2-204ENST00000415251 CARMIL3Q8ND23 1372 aa17.31■□□□□ 0.36
PHTF2-204ENST00000415251 H7C1W4 665 aa17.31■□□□□ 0.36
PHTF2-204ENST00000415251 GRM8O00222 908 aa17.31■□□□□ 0.36
PHTF2-204ENST00000415251 ZBTB7BO15156 539 aaPredicted RBP17.31■□□□□ 0.36
PHTF2-204ENST00000415251 ERFEQ4G0M1 354 aa17.31■□□□□ 0.36
PHTF2-204ENST00000415251 TPTE2Q6XPS3 522 aa17.31■□□□□ 0.36
PHTF2-204ENST00000415251 GTF2E1P29083 439 aaPredicted RBP17.3■□□□□ 0.36
PHTF2-204ENST00000415251 PRR5LQ6MZQ0 368 aa17.3■□□□□ 0.36
PHTF2-204ENST00000415251 ZBTB38Q8NAP3 1195 aaPredicted RBP17.3■□□□□ 0.36
PHTF2-204ENST00000415251 NPHP1O15259 732 aa17.3■□□□□ 0.36
PHTF2-204ENST00000415251 PCCAP05165 728 aaPredicted RBP17.3■□□□□ 0.36
PHTF2-204ENST00000415251 HCLS1P14317 486 aaPredicted RBP17.3■□□□□ 0.36
PHTF2-204ENST00000415251 PTGER2P43116 358 aa17.3■□□□□ 0.36
PHTF2-204ENST00000415251 CASP7P55210 303 aa17.3■□□□□ 0.36
PHTF2-204ENST00000415251 SGIP1Q9BQI5 828 aa17.3■□□□□ 0.36
PHTF2-204ENST00000415251 CNBD1Q8NA66 436 aa17.29■□□□□ 0.36
PHTF2-204ENST00000415251 EXOC6Q8TAG9 804 aa17.29■□□□□ 0.36
PHTF2-204ENST00000415251 SH3TC1Q8TE82 1336 aa17.28■□□□□ 0.36
PHTF2-204ENST00000415251 NYXQ9GZU5 481 aa17.28■□□□□ 0.36
PHTF2-204ENST00000415251 C1orf115Q9H7X2 142 aa17.28■□□□□ 0.36
PHTF2-204ENST00000415251 COL24A1Q17RW2 1714 aa17.27■□□□□ 0.36
PHTF2-204ENST00000415251 IRS4O14654 1257 aaPredicted RBP17.27■□□□□ 0.36
PHTF2-204ENST00000415251 EPHA10Q5JZY3 1008 aa17.27■□□□□ 0.36
PHTF2-204ENST00000415251 KAZALD1Q96I82 304 aa17.27■□□□□ 0.36
PHTF2-204ENST00000415251 SUCLG2Q96I99 432 aa17.27■□□□□ 0.36
PHTF2-204ENST00000415251 DDX19BQ9UMR2 479 aa17.27■□□□□ 0.36
PHTF2-204ENST00000415251 ABCC12Q96J65 1359 aa17.27■□□□□ 0.36
PHTF2-204ENST00000415251 N4BP2Q86UW6 1770 aaPredicted RBP17.27■□□□□ 0.36
PHTF2-204ENST00000415251 GOLGB1Q14789 3259 aaKnown RBP17.27■□□□□ 0.36
PHTF2-204ENST00000415251 UTYO14607 1347 aa17.27■□□□□ 0.36
PHTF2-204ENST00000415251 UBTFL1P0CB47 393 aaPredicted RBP17.27■□□□□ 0.35
PHTF2-204ENST00000415251 POLD1P28340 1107 aa17.27■□□□□ 0.35
PHTF2-204ENST00000415251 C3orf67Q6ZVT6 689 aa17.27■□□□□ 0.35
PHTF2-204ENST00000415251 SPON1Q9HCB6 807 aa17.27■□□□□ 0.35
PHTF2-204ENST00000415251 CCDC85AQ96PX6 553 aaPredicted RBP17.25■□□□□ 0.35
PHTF2-204ENST00000415251 ZBTB40Q9NUA8 1239 aa17.25■□□□□ 0.35
PHTF2-204ENST00000415251 LRRFIP2Q9Y608 721 aaKnown RBP17.25■□□□□ 0.35
PHTF2-204ENST00000415251 GNAI3P08754 354 aa17.24■□□□□ 0.35
PHTF2-204ENST00000415251 SLC10A5Q5PT55 438 aa17.24■□□□□ 0.35
PHTF2-204ENST00000415251 ST5P78524 1137 aa17.24■□□□□ 0.35
PHTF2-204ENST00000415251 FOXO4P98177 505 aa17.24■□□□□ 0.35
PHTF2-204ENST00000415251 CDHR2Q9BYE9 1310 aa17.23■□□□□ 0.35
PHTF2-204ENST00000415251 NRXN2Q9P2S2 1712 aa17.23■□□□□ 0.35
PHTF2-204ENST00000415251 IBTKQ9P2D0 1353 aaPredicted RBP17.23■□□□□ 0.35
PHTF2-204ENST00000415251 BICC1Q9H694 974 aaKnown RBP17.23■□□□□ 0.35
PHTF2-204ENST00000415251 PPP1R1BQ9UD71 204 aaPredicted RBP17.23■□□□□ 0.35
PHTF2-204ENST00000415251 GNAI2P04899 355 aa17.22■□□□□ 0.35
PHTF2-204ENST00000415251 KLHL34Q8N239 644 aa17.22■□□□□ 0.35
PHTF2-204ENST00000415251 PDE8AO60658 829 aa17.21■□□□□ 0.35
PHTF2-204ENST00000415251 LMBR1LQ6UX01 489 aa17.21■□□□□ 0.35
PHTF2-204ENST00000415251 NLRP3Q96P20 1036 aa17.21■□□□□ 0.35
PHTF2-204ENST00000415251 BRIP1Q9BX63 1249 aa17.21■□□□□ 0.35
PHTF2-204ENST00000415251 DDX60Q8IY21 1712 aaKnown RBP17.21■□□□□ 0.35
PHTF2-204ENST00000415251 ANKRD44Q8N8A2 993 aa17.21■□□□□ 0.35
PHTF2-204ENST00000415251 TTLL11Q8NHH1 800 aa17.21■□□□□ 0.35
PHTF2-204ENST00000415251 PLA2G12BQ9BX93 195 aa17.21■□□□□ 0.35
PHTF2-204ENST00000415251 CTSWP56202 376 aa17.2■□□□□ 0.34
PHTF2-204ENST00000415251 ANKRD31Q8N7Z5 1873 aa17.2■□□□□ 0.34
PHTF2-204ENST00000415251 CHRNA5P30532 468 aa17.19■□□□□ 0.34
PHTF2-204ENST00000415251 CHMP3Q9Y3E7 222 aa17.19■□□□□ 0.34
PHTF2-204ENST00000415251 PCDHB15Q9Y5E8 787 aa17.19■□□□□ 0.34
PHTF2-204ENST00000415251 TNRC6CQ9HCJ0 1690 aaKnown RBP17.19■□□□□ 0.34
PHTF2-204ENST00000415251 NEFLP07196 543 aa17.18■□□□□ 0.34
PHTF2-204ENST00000415251 CSF1RP07333 972 aa17.18■□□□□ 0.34
PHTF2-204ENST00000415251 GREM2Q9H772 168 aa17.18■□□□□ 0.34
PHTF2-204ENST00000415251 SEC31BQ9NQW1 1179 aa17.18■□□□□ 0.34
PHTF2-204ENST00000415251 PNMA6EA0A0J9YXQ4 647 aa17.18■□□□□ 0.34
PHTF2-204ENST00000415251 KLRG2A4D1S0 409 aaPredicted RBP17.18■□□□□ 0.34
PHTF2-204ENST00000415251 RABL6Q3YEC7 729 aaPredicted RBP17.18■□□□□ 0.34
PHTF2-204ENST00000415251 TAF1P21675 1872 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms