RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 LGR6Q9HBX8 967 aa12.16□□□□□ -0.46
LINC01888-201ENST00000415138 RRP7AQ9Y3A4 280 aaKnown RBP12.16□□□□□ -0.46
LINC01888-201ENST00000415138 TOGARAM1Q9Y4F4 1720 aa12.16□□□□□ -0.46
LINC01888-201ENST00000415138 APAF1O14727 1248 aa12.15□□□□□ -0.46
LINC01888-201ENST00000415138 PTPN5P54829 565 aa12.15□□□□□ -0.46
LINC01888-201ENST00000415138 FTSJ3Q8IY81 847 aaKnown RBP12.15□□□□□ -0.46
LINC01888-201ENST00000415138 PLSCR1O15162 318 aa12.14□□□□□ -0.47
LINC01888-201ENST00000415138 HMGB1P09429 215 aaKnown RBP12.14□□□□□ -0.47
LINC01888-201ENST00000415138 GTF2E1P29083 439 aaPredicted RBP12.14□□□□□ -0.47
LINC01888-201ENST00000415138 EN1Q05925 392 aaPredicted RBP12.14□□□□□ -0.47
LINC01888-201ENST00000415138 PROX2Q3B8N5 592 aa12.14□□□□□ -0.47
LINC01888-201ENST00000415138 MCM10Q7L590 875 aa12.14□□□□□ -0.47
LINC01888-201ENST00000415138 TTC5Q8N0Z6 440 aa12.14□□□□□ -0.47
LINC01888-201ENST00000415138 PIGBQ92521 554 aa12.14□□□□□ -0.47
LINC01888-201ENST00000415138 WNT2BQ93097 391 aa12.14□□□□□ -0.47
LINC01888-201ENST00000415138 IPO9Q96P70 1041 aaKnown RBP12.14□□□□□ -0.47
LINC01888-201ENST00000415138 ARID3AQ99856 593 aa12.14□□□□□ -0.47
LINC01888-201ENST00000415138 SLC52A2Q9HAB3 445 aa12.14□□□□□ -0.47
LINC01888-201ENST00000415138 PLA2G2EQ9NZK7 142 aa12.14□□□□□ -0.47
LINC01888-201ENST00000415138 RABGEF1Q9UJ41 708 aa12.14□□□□□ -0.47
LINC01888-201ENST00000415138 IL17REQ8NFR9 667 aa12.13□□□□□ -0.47
LINC01888-201ENST00000415138 KDM6AO15550 1401 aaPredicted RBP12.12□□□□□ -0.47
LINC01888-201ENST00000415138 BTBD11A6QL63 1104 aa12.12□□□□□ -0.47
LINC01888-201ENST00000415138 DCTN1Q14203 1278 aa12.12□□□□□ -0.47
LINC01888-201ENST00000415138 TAF7Q15545 349 aaPredicted RBP12.12□□□□□ -0.47
LINC01888-201ENST00000415138 NBPF14Q5TI25 921 aa12.12□□□□□ -0.47
LINC01888-201ENST00000415138 DEFB132Q7Z7B7 95 aa12.12□□□□□ -0.47
LINC01888-201ENST00000415138 NGEFQ8N5V2 710 aa12.12□□□□□ -0.47
LINC01888-201ENST00000415138 LAS1LQ9Y4W2 734 aaKnown RBP12.12□□□□□ -0.47
LINC01888-201ENST00000415138 RGPD3A6NKT7 1758 aaPredicted RBP12.12□□□□□ -0.47
LINC01888-201ENST00000415138 RGPD4Q7Z3J3 1758 aa12.12□□□□□ -0.47
LINC01888-201ENST00000415138 SIPA1L3O60292 1781 aaPredicted RBP12.11□□□□□ -0.47
LINC01888-201ENST00000415138 EZH2Q15910 746 aaKnown RBP12.11□□□□□ -0.47
LINC01888-201ENST00000415138 PTF1AQ7RTS3 328 aa12.11□□□□□ -0.47
LINC01888-201ENST00000415138 LY75O60449 1722 aa12.11□□□□□ -0.47
LINC01888-201ENST00000415138 ADAMTS7Q9UKP4 1686 aa12.1□□□□□ -0.47
LINC01888-201ENST00000415138 PALLDQ8WX93 1383 aa12.1□□□□□ -0.47
LINC01888-201ENST00000415138 MAP3K7O43318 606 aa12.1□□□□□ -0.47
LINC01888-201ENST00000415138 THSD4Q6ZMP0 1018 aa12.1□□□□□ -0.47
LINC01888-201ENST00000415138 ANP32BQ92688 251 aaKnown RBP12.1□□□□□ -0.47
LINC01888-201ENST00000415138 PDCL3Q9H2J4 239 aa12.1□□□□□ -0.47
LINC01888-201ENST00000415138 CCNL1Q9UK58 526 aaPredicted RBP12.1□□□□□ -0.47
LINC01888-201ENST00000415138 BRPF3Q9ULD4 1205 aa12.1□□□□□ -0.47
LINC01888-201ENST00000415138 ASAP1Q9ULH1 1129 aa12.1□□□□□ -0.47
LINC01888-201ENST00000415138 ARIH1Q9Y4X5 557 aaPredicted RBP12.1□□□□□ -0.47
LINC01888-201ENST00000415138 SENP3-EIF4A1A0A087X0R7 540 aa12.09□□□□□ -0.47
LINC01888-201ENST00000415138 ATP6V1AP38606 617 aa12.09□□□□□ -0.47
LINC01888-201ENST00000415138 TXNRD1Q16881 649 aa12.09□□□□□ -0.47
LINC01888-201ENST00000415138 SLC27A3Q5K4L6 730 aa12.09□□□□□ -0.47
LINC01888-201ENST00000415138 ATG3Q9NT62 314 aa12.09□□□□□ -0.47
LINC01888-201ENST00000415138 KIAA1468Q9P260 1216 aa12.09□□□□□ -0.47
LINC01888-201ENST00000415138 CEMIPQ8WUJ3 1361 aa12.08□□□□□ -0.48
LINC01888-201ENST00000415138 GRXCR2A6NFK2 248 aa12.08□□□□□ -0.48
LINC01888-201ENST00000415138 PTCD1O75127 700 aaKnown RBP12.08□□□□□ -0.48
LINC01888-201ENST00000415138 SLC39A6Q13433 755 aa12.08□□□□□ -0.48
LINC01888-201ENST00000415138 CAMKK2Q96RR4 588 aa12.08□□□□□ -0.48
LINC01888-201ENST00000415138 THUMPD2Q9BTF0 503 aaKnown RBP12.08□□□□□ -0.48
LINC01888-201ENST00000415138 CHMP4BQ9H444 224 aaKnown RBP12.08□□□□□ -0.48
LINC01888-201ENST00000415138 GNAI1P63096 354 aa12.07□□□□□ -0.48
LINC01888-201ENST00000415138 CCDC27Q2M243 656 aa12.07□□□□□ -0.48
LINC01888-201ENST00000415138 ZNF790Q6PG37 636 aa12.07□□□□□ -0.48
LINC01888-201ENST00000415138 FMNL2Q96PY5 1086 aa12.07□□□□□ -0.48
LINC01888-201ENST00000415138 MAP7D2Q96T17 732 aa12.07□□□□□ -0.48
LINC01888-201ENST00000415138 BABAM1Q9NWV8 329 aa12.07□□□□□ -0.48
LINC01888-201ENST00000415138 TSPYL4Q9UJ04 414 aa12.07□□□□□ -0.48
LINC01888-201ENST00000415138 MRC1P22897 1456 aa12.07□□□□□ -0.48
LINC01888-201ENST00000415138 LOC102724428A0A0B4J2F2 783 aa12.06□□□□□ -0.48
LINC01888-201ENST00000415138 TPM2P07951 284 aa12.06□□□□□ -0.48
LINC01888-201ENST00000415138 SIK1P57059 783 aa12.06□□□□□ -0.48
LINC01888-201ENST00000415138 ANKK1Q8NFD2 765 aa12.06□□□□□ -0.48
LINC01888-201ENST00000415138 TEX13AQ9BXU3 409 aaPredicted RBP12.06□□□□□ -0.48
LINC01888-201ENST00000415138 STK32BQ9NY57 414 aa12.06□□□□□ -0.48
LINC01888-201ENST00000415138 MIS18AQ9NYP9 233 aa12.06□□□□□ -0.48
LINC01888-201ENST00000415138 TAF1LQ8IZX4 1826 aa12.06□□□□□ -0.48
LINC01888-201ENST00000415138 RREB1Q92766 1687 aa12.06□□□□□ -0.48
LINC01888-201ENST00000415138 TRIM6-TRIM34B2RNG4 842 aa12.05□□□□□ -0.48
LINC01888-201ENST00000415138 LAPTM4BQ86VI4 370 aa12.05□□□□□ -0.48
LINC01888-201ENST00000415138 WWC1Q8IX03 1113 aa12.05□□□□□ -0.48
LINC01888-201ENST00000415138 C5P01031 1676 aa12.05□□□□□ -0.48
LINC01888-201ENST00000415138 PAPPAQ13219 1627 aa12.04□□□□□ -0.48
LINC01888-201ENST00000415138 NUP188Q5SRE5 1749 aa12.04□□□□□ -0.48
LINC01888-201ENST00000415138 HNRNPUQ00839 825 aaKnown RBP eCLIP12.04□□□□□ -0.48
LINC01888-201ENST00000415138 TSR1Q2NL82 804 aaKnown RBP12.04□□□□□ -0.48
LINC01888-201ENST00000415138 WDR63Q8IWG1 891 aa12.04□□□□□ -0.48
LINC01888-201ENST00000415138 SMAP1Q8IYB5 467 aaPredicted RBP12.04□□□□□ -0.48
LINC01888-201ENST00000415138 KDM3BQ7LBC6 1761 aa12.04□□□□□ -0.48
LINC01888-201ENST00000415138 UBR2Q8IWV8 1755 aa12.04□□□□□ -0.48
LINC01888-201ENST00000415138 ZNF831Q5JPB2 1677 aa12.03□□□□□ -0.48
LINC01888-201ENST00000415138 STARD3NLO95772 234 aa12.03□□□□□ -0.48
LINC01888-201ENST00000415138 KCNQ4P56696 695 aa12.03□□□□□ -0.48
LINC01888-201ENST00000415138 AK7Q96M32 723 aa12.03□□□□□ -0.48
LINC01888-201ENST00000415138 IFT57Q9NWB7 429 aa12.03□□□□□ -0.48
LINC01888-201ENST00000415138 SNRPA1P09661 255 aaKnown RBP12.02□□□□□ -0.49
LINC01888-201ENST00000415138 ZNF496Q96IT1 587 aaPredicted RBP12.02□□□□□ -0.49
LINC01888-201ENST00000415138 MYH16Q9H6N6 1097 aa12.02□□□□□ -0.49
LINC01888-201ENST00000415138 TFCP2L1Q9NZI6 479 aa12.02□□□□□ -0.49
LINC01888-201ENST00000415138 HEG1Q9ULI3 1381 aa12.02□□□□□ -0.49
LINC01888-201ENST00000415138 CHL1O00533 1208 aa12.01□□□□□ -0.49
LINC01888-201ENST00000415138 KCNQ3O43525 872 aa12.01□□□□□ -0.49
LINC01888-201ENST00000415138 UTP14CQ5TAP6 766 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms