RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 PCCAP05165 728 aaPredicted RBP10.24□□□□□ -0.77
HDAC9-207ENST00000413509 RFX5P48382 616 aaPredicted RBP10.24□□□□□ -0.77
HDAC9-207ENST00000413509 FOXO4P98177 505 aa10.24□□□□□ -0.77
HDAC9-207ENST00000413509 BMP2KLQ5H9B9 411 aa10.24□□□□□ -0.77
HDAC9-207ENST00000413509 UBE3BQ7Z3V4 1068 aa10.24□□□□□ -0.77
HDAC9-207ENST00000413509 NLRP10Q86W26 655 aa10.24□□□□□ -0.77
HDAC9-207ENST00000413509 DZIP3Q86Y13 1208 aaKnown RBP10.24□□□□□ -0.77
HDAC9-207ENST00000413509 PLEKHM2Q8IWE5 1019 aa10.24□□□□□ -0.77
HDAC9-207ENST00000413509 OSBPL3Q9H4L5 887 aa10.24□□□□□ -0.77
HDAC9-207ENST00000413509 EXOC6BQ9Y2D4 811 aa10.24□□□□□ -0.77
HDAC9-207ENST00000413509 MYH3P11055 1940 aa10.24□□□□□ -0.77
HDAC9-207ENST00000413509 CDHR2Q9BYE9 1310 aa10.24□□□□□ -0.77
HDAC9-207ENST00000413509 C4AP0C0L4 1744 aa10.24□□□□□ -0.77
HDAC9-207ENST00000413509 TNS1Q9HBL0 1735 aaKnown RBP10.24□□□□□ -0.77
HDAC9-207ENST00000413509 UBR3Q6ZT12 1888 aa10.23□□□□□ -0.77
HDAC9-207ENST00000413509 HSP90AB4PQ58FF6 505 aa10.23□□□□□ -0.77
HDAC9-207ENST00000413509 ZBTB38Q8NAP3 1195 aaPredicted RBP10.23□□□□□ -0.77
HDAC9-207ENST00000413509 LRRCC1Q9C099 1032 aa10.23□□□□□ -0.77
HDAC9-207ENST00000413509 COPRSQ9NQ92 184 aa10.23□□□□□ -0.77
HDAC9-207ENST00000413509 UBN2Q6ZU65 1347 aa10.23□□□□□ -0.77
HDAC9-207ENST00000413509 LRP5O75197 1615 aa10.22□□□□□ -0.77
HDAC9-207ENST00000413509 RPS6KA4O75676 772 aa10.22□□□□□ -0.77
HDAC9-207ENST00000413509 RXRBP28702 533 aa10.22□□□□□ -0.77
HDAC9-207ENST00000413509 CLEC4GQ6UXB4 293 aa10.22□□□□□ -0.77
HDAC9-207ENST00000413509 KIF1BPQ96EK5 621 aa10.22□□□□□ -0.77
HDAC9-207ENST00000413509 STAP2Q9UGK3 403 aa10.22□□□□□ -0.77
HDAC9-207ENST00000413509 CCNL1Q9UK58 526 aaPredicted RBP10.22□□□□□ -0.77
HDAC9-207ENST00000413509 RBM19Q9Y4C8 960 aaKnown RBP10.22□□□□□ -0.77
HDAC9-207ENST00000413509 AOX1Q06278 1338 aa10.22□□□□□ -0.77
HDAC9-207ENST00000413509 USP42Q9H9J4 1324 aaKnown RBP10.22□□□□□ -0.77
HDAC9-207ENST00000413509 DDX60Q8IY21 1712 aaKnown RBP10.21□□□□□ -0.77
HDAC9-207ENST00000413509 SMARCA5O60264 1052 aaPredicted RBP10.21□□□□□ -0.77
HDAC9-207ENST00000413509 SURF6O75683 361 aaKnown RBP10.21□□□□□ -0.77
HDAC9-207ENST00000413509 CSF1RP07333 972 aa10.21□□□□□ -0.77
HDAC9-207ENST00000413509 SLC27A3Q5K4L6 730 aa10.21□□□□□ -0.77
HDAC9-207ENST00000413509 ERC1Q8IUD2 1116 aa10.21□□□□□ -0.77
HDAC9-207ENST00000413509 C16orf71Q8IYS4 520 aaPredicted RBP10.21□□□□□ -0.77
HDAC9-207ENST00000413509 RHPN1Q8TCX5 695 aa10.21□□□□□ -0.77
HDAC9-207ENST00000413509 OTUD7AQ8TE49 926 aaPredicted RBP10.21□□□□□ -0.77
HDAC9-207ENST00000413509 AK7Q96M32 723 aa10.21□□□□□ -0.77
HDAC9-207ENST00000413509 LRRC4BQ9NT99 713 aa10.21□□□□□ -0.77
HDAC9-207ENST00000413509 TBC1D2BQ9UPU7 963 aa10.21□□□□□ -0.77
HDAC9-207ENST00000413509 ZNF330Q9Y3S2 320 aaPredicted RBP10.21□□□□□ -0.77
HDAC9-207ENST00000413509 GSPT1P15170 499 aaKnown RBP10.2□□□□□ -0.78
HDAC9-207ENST00000413509 PTPN12Q05209 780 aaKnown RBP10.2□□□□□ -0.78
HDAC9-207ENST00000413509 PARP10Q53GL7 1025 aa10.2□□□□□ -0.78
HDAC9-207ENST00000413509 TTC22Q5TAA0 569 aa10.2□□□□□ -0.78
HDAC9-207ENST00000413509 POTEAQ6S8J7 498 aa10.2□□□□□ -0.78
HDAC9-207ENST00000413509 JARID2Q92833 1246 aaPredicted RBP10.2□□□□□ -0.78
HDAC9-207ENST00000413509 NARFQ9UHQ1 456 aa10.2□□□□□ -0.78
HDAC9-207ENST00000413509 PDE1AP54750 535 aa10.19□□□□□ -0.78
HDAC9-207ENST00000413509 KCNQ4P56696 695 aa10.19□□□□□ -0.78
HDAC9-207ENST00000413509 LMBR1LQ6UX01 489 aa10.19□□□□□ -0.78
HDAC9-207ENST00000413509 AMIGO3Q86WK7 504 aa10.19□□□□□ -0.78
HDAC9-207ENST00000413509 BCL2L12Q9HB09 334 aa10.19□□□□□ -0.78
HDAC9-207ENST00000413509 PA2G4Q9UQ80 394 aaKnown RBP10.19□□□□□ -0.78
HDAC9-207ENST00000413509 ZNF652Q9Y2D9 606 aa10.19□□□□□ -0.78
HDAC9-207ENST00000413509 RTL9Q8NET4 1388 aa10.18□□□□□ -0.78
HDAC9-207ENST00000413509 PLSCR1O15162 318 aa10.18□□□□□ -0.78
HDAC9-207ENST00000413509 SASH1O94885 1247 aa10.18□□□□□ -0.78
HDAC9-207ENST00000413509 TRIM37O94972 964 aa10.18□□□□□ -0.78
HDAC9-207ENST00000413509 NTSR2O95665 410 aa10.18□□□□□ -0.78
HDAC9-207ENST00000413509 GPTP24298 496 aa10.18□□□□□ -0.78
HDAC9-207ENST00000413509 HMGB2P26583 209 aaKnown RBP10.18□□□□□ -0.78
HDAC9-207ENST00000413509 NPM2Q86SE8 214 aaKnown RBP10.18□□□□□ -0.78
HDAC9-207ENST00000413509 PROM2Q8N271 834 aa10.18□□□□□ -0.78
HDAC9-207ENST00000413509 FAM89AQ96GI7 184 aa10.18□□□□□ -0.78
HDAC9-207ENST00000413509 ZBTB47Q9UFB7 747 aaPredicted RBP10.18□□□□□ -0.78
HDAC9-207ENST00000413509 FBXO3Q9UK99 471 aa10.18□□□□□ -0.78
HDAC9-207ENST00000413509 CASZ1Q86V15 1759 aa10.18□□□□□ -0.78
HDAC9-207ENST00000413509 APBB1O00213 710 aa10.17□□□□□ -0.78
HDAC9-207ENST00000413509 GNPATO15228 680 aa10.17□□□□□ -0.78
HDAC9-207ENST00000413509 CIAO1O76071 339 aa10.17□□□□□ -0.78
HDAC9-207ENST00000413509 MX1P20591 662 aa10.17□□□□□ -0.78
HDAC9-207ENST00000413509 SUSD4Q5VX71 490 aa10.17□□□□□ -0.78
HDAC9-207ENST00000413509 ATG9AQ7Z3C6 839 aa10.17□□□□□ -0.78
HDAC9-207ENST00000413509 SYNE4Q8N205 404 aa10.17□□□□□ -0.78
HDAC9-207ENST00000413509 RTCBQ9Y3I0 505 aaKnown RBP10.17□□□□□ -0.78
HDAC9-207ENST00000413509 SH3TC1Q8TE82 1336 aa10.16□□□□□ -0.78
HDAC9-207ENST00000413509 IRS4O14654 1257 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-207ENST00000413509 PDE8AO60658 829 aa10.16□□□□□ -0.78
HDAC9-207ENST00000413509 CTSWP56202 376 aa10.16□□□□□ -0.78
HDAC9-207ENST00000413509 G3BP1Q13283 466 aaKnown RBP eCLIP10.16□□□□□ -0.78
HDAC9-207ENST00000413509 TTLL11Q8NHH1 800 aa10.16□□□□□ -0.78
HDAC9-207ENST00000413509 PI4K2BQ8TCG2 481 aa10.16□□□□□ -0.78
HDAC9-207ENST00000413509 UTP14AQ9BVJ6 771 aaKnown RBP10.16□□□□□ -0.78
HDAC9-207ENST00000413509 IL1RAPL2Q9NP60 686 aa10.16□□□□□ -0.78
HDAC9-207ENST00000413509 GPR108Q9NPR9 543 aa10.16□□□□□ -0.78
HDAC9-207ENST00000413509 TRMT112Q9UI30 125 aaKnown RBP10.16□□□□□ -0.78
HDAC9-207ENST00000413509 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-207ENST00000413509 RIC1Q4ADV7 1423 aa10.16□□□□□ -0.78
HDAC9-207ENST00000413509 TTC41PQ6P2S7 1318 aa10.15□□□□□ -0.78
HDAC9-207ENST00000413509 HSP90B1P14625 803 aaKnown RBP10.15□□□□□ -0.78
HDAC9-207ENST00000413509 SSFA2P28290 1259 aa10.15□□□□□ -0.78
HDAC9-207ENST00000413509 TXNRD1Q16881 649 aa10.15□□□□□ -0.78
HDAC9-207ENST00000413509 KLHDC4Q8TBB5 520 aa10.15□□□□□ -0.78
HDAC9-207ENST00000413509 ARHGEF1Q92888 912 aaKnown RBP10.15□□□□□ -0.78
HDAC9-207ENST00000413509 ARXQ96QS3 562 aa10.15□□□□□ -0.78
HDAC9-207ENST00000413509 NIP7Q9Y221 180 aaKnown RBP eCLIP10.15□□□□□ -0.78
HDAC9-207ENST00000413509 QSER1Q2KHR3 1735 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms