RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 DDX19BQ9UMR2 479 aa14.68□□□□□ -0.06
HDAC9-206ENST00000413380 MYH3P11055 1940 aa14.68□□□□□ -0.06
HDAC9-206ENST00000413380 UTYO14607 1347 aa14.67□□□□□ -0.06
HDAC9-206ENST00000413380 RFC4P35249 363 aa14.67□□□□□ -0.06
HDAC9-206ENST00000413380 ERICH6BQ5W0A0 696 aa14.67□□□□□ -0.06
HDAC9-206ENST00000413380 SLC4A10Q6U841 1118 aa14.67□□□□□ -0.06
HDAC9-206ENST00000413380 CCDC191Q8NCU4 936 aa14.67□□□□□ -0.06
HDAC9-206ENST00000413380 COG6Q9Y2V7 657 aa14.67□□□□□ -0.06
HDAC9-206ENST00000413380 ZBTB7BO15156 539 aaPredicted RBP14.66□□□□□ -0.06
HDAC9-206ENST00000413380 ZPR1O75312 459 aa14.66□□□□□ -0.06
HDAC9-206ENST00000413380 GYS1P13807 737 aa14.66□□□□□ -0.06
HDAC9-206ENST00000413380 SMIM5Q71RC9 77 aa14.66□□□□□ -0.06
HDAC9-206ENST00000413380 COL23A1Q86Y22 540 aaPredicted RBP14.66□□□□□ -0.06
HDAC9-206ENST00000413380 CRBNQ96SW2 442 aa14.66□□□□□ -0.06
HDAC9-206ENST00000413380 MYD88Q99836 296 aa14.66□□□□□ -0.06
HDAC9-206ENST00000413380 SRP68Q9UHB9 627 aaKnown RBP14.66□□□□□ -0.06
HDAC9-206ENST00000413380 UBN2Q6ZU65 1347 aa14.66□□□□□ -0.06
HDAC9-206ENST00000413380 PHF14O94880 888 aa14.65□□□□□ -0.06
HDAC9-206ENST00000413380 NEFLP07196 543 aa14.65□□□□□ -0.06
HDAC9-206ENST00000413380 GCKRQ14397 625 aa14.65□□□□□ -0.06
HDAC9-206ENST00000413380 PARP10Q53GL7 1025 aa14.65□□□□□ -0.06
HDAC9-206ENST00000413380 USPL1Q5W0Q7 1092 aa14.65□□□□□ -0.06
HDAC9-206ENST00000413380 ITPRIPQ8IWB1 547 aa14.65□□□□□ -0.06
HDAC9-206ENST00000413380 CHMP4BQ9H444 224 aaKnown RBP14.65□□□□□ -0.06
HDAC9-206ENST00000413380 DDX60Q8IY21 1712 aaKnown RBP14.65□□□□□ -0.06
HDAC9-206ENST00000413380 CWF19L2Q2TBE0 894 aaKnown RBP14.64□□□□□ -0.07
HDAC9-206ENST00000413380 NLRP10Q86W26 655 aa14.64□□□□□ -0.07
HDAC9-206ENST00000413380 USP44Q9H0E7 712 aa14.64□□□□□ -0.07
HDAC9-206ENST00000413380 ZBTB40Q9NUA8 1239 aa14.64□□□□□ -0.07
HDAC9-206ENST00000413380 CWC25Q9NXE8 425 aaPredicted RBP14.64□□□□□ -0.07
HDAC9-206ENST00000413380 GRM8O00222 908 aa14.63□□□□□ -0.07
HDAC9-206ENST00000413380 ARXQ96QS3 562 aa14.63□□□□□ -0.07
HDAC9-206ENST00000413380 RIC1Q4ADV7 1423 aa14.63□□□□□ -0.07
HDAC9-206ENST00000413380 ATP5J2-PTCD1G3V325 749 aa14.62□□□□□ -0.07
HDAC9-206ENST00000413380 H7C1W4 665 aa14.62□□□□□ -0.07
HDAC9-206ENST00000413380 GNAI3P08754 354 aa14.62□□□□□ -0.07
HDAC9-206ENST00000413380 TM4SF1P30408 202 aa14.62□□□□□ -0.07
HDAC9-206ENST00000413380 CASP7P55210 303 aa14.62□□□□□ -0.07
HDAC9-206ENST00000413380 FKBP8Q14318 412 aa14.62□□□□□ -0.07
HDAC9-206ENST00000413380 TBC1D9BQ66K14 1250 aa14.62□□□□□ -0.07
HDAC9-206ENST00000413380 EXOC6Q8TAG9 804 aa14.62□□□□□ -0.07
HDAC9-206ENST00000413380 SLC16A10Q8TF71 515 aa14.62□□□□□ -0.07
HDAC9-206ENST00000413380 MEIS3Q99687 375 aa14.62□□□□□ -0.07
HDAC9-206ENST00000413380 CARMIL3Q8ND23 1372 aa14.61□□□□□ -0.07
HDAC9-206ENST00000413380 PCCAP05165 728 aaPredicted RBP14.61□□□□□ -0.07
HDAC9-206ENST00000413380 NLGN1Q8N2Q7 840 aa14.61□□□□□ -0.07
HDAC9-206ENST00000413380 NIP7Q9Y221 180 aaKnown RBP eCLIP14.61□□□□□ -0.07
HDAC9-206ENST00000413380 CDHR2Q9BYE9 1310 aa14.61□□□□□ -0.07
HDAC9-206ENST00000413380 NTSR2O95665 410 aa14.6□□□□□ -0.07
HDAC9-206ENST00000413380 GPTP24298 496 aa14.6□□□□□ -0.07
HDAC9-206ENST00000413380 IRX6P78412 446 aaPredicted RBP14.6□□□□□ -0.07
HDAC9-206ENST00000413380 NFIXQ14938 502 aa14.6□□□□□ -0.07
HDAC9-206ENST00000413380 ZBTB38Q8NAP3 1195 aaPredicted RBP14.6□□□□□ -0.07
HDAC9-206ENST00000413380 NBPF7P0C2Y1 421 aaPredicted RBP14.59□□□□□ -0.07
HDAC9-206ENST00000413380 SUSD4Q5VX71 490 aa14.59□□□□□ -0.07
HDAC9-206ENST00000413380 PPP1R42Q7Z4L9 355 aa14.59□□□□□ -0.07
HDAC9-206ENST00000413380 SETDB2Q96T68 719 aa14.59□□□□□ -0.07
HDAC9-206ENST00000413380 PLA2G12BQ9BX93 195 aa14.59□□□□□ -0.07
HDAC9-206ENST00000413380 C9orf78Q9NZ63 289 aaPredicted RBP14.59□□□□□ -0.07
HDAC9-206ENST00000413380 HDAC5Q9UQL6 1122 aa14.59□□□□□ -0.07
HDAC9-206ENST00000413380 KIF13BQ9NQT8 1826 aa14.59□□□□□ -0.07
HDAC9-206ENST00000413380 ANKRD31Q8N7Z5 1873 aa14.59□□□□□ -0.07
HDAC9-206ENST00000413380 UBTFL1P0CB47 393 aaPredicted RBP14.58□□□□□ -0.08
HDAC9-206ENST00000413380 UTP14AQ9BVJ6 771 aaKnown RBP14.58□□□□□ -0.08
HDAC9-206ENST00000413380 NYXQ9GZU5 481 aa14.58□□□□□ -0.08
HDAC9-206ENST00000413380 POLRMTO00411 1230 aaKnown RBP14.57□□□□□ -0.08
HDAC9-206ENST00000413380 GNAI2P04899 355 aa14.57□□□□□ -0.08
HDAC9-206ENST00000413380 MTX1Q13505 466 aa14.57□□□□□ -0.08
HDAC9-206ENST00000413380 KAZALD1Q96I82 304 aa14.57□□□□□ -0.08
HDAC9-206ENST00000413380 SH3TC1Q8TE82 1336 aa14.57□□□□□ -0.08
HDAC9-206ENST00000413380 TNRC6CQ9HCJ0 1690 aaKnown RBP14.56□□□□□ -0.08
HDAC9-206ENST00000413380 SPDYE4A6NLX3 237 aa14.56□□□□□ -0.08
HDAC9-206ENST00000413380 DDR1Q08345 913 aa14.56□□□□□ -0.08
HDAC9-206ENST00000413380 RABL6Q3YEC7 729 aaPredicted RBP14.56□□□□□ -0.08
HDAC9-206ENST00000413380 SLC10A5Q5PT55 438 aa14.56□□□□□ -0.08
HDAC9-206ENST00000413380 UBE3BQ7Z3V4 1068 aa14.56□□□□□ -0.08
HDAC9-206ENST00000413380 PDGFDQ9GZP0 370 aaPredicted RBP14.56□□□□□ -0.08
HDAC9-206ENST00000413380 TRMT112Q9UI30 125 aaKnown RBP14.56□□□□□ -0.08
HDAC9-206ENST00000413380 SSUH2Q9Y2M2 353 aa14.56□□□□□ -0.08
HDAC9-206ENST00000413380 HSP90B1P14625 803 aaKnown RBP14.55□□□□□ -0.08
HDAC9-206ENST00000413380 SUCLG2Q96I99 432 aa14.55□□□□□ -0.08
HDAC9-206ENST00000413380 LRRFIP2Q9Y608 721 aaKnown RBP14.55□□□□□ -0.08
HDAC9-206ENST00000413380 FOXO4P98177 505 aa14.54□□□□□ -0.08
HDAC9-206ENST00000413380 R3HDM1Q15032 1099 aaKnown RBP14.54□□□□□ -0.08
HDAC9-206ENST00000413380 CEP85Q6P2H3 762 aa14.54□□□□□ -0.08
HDAC9-206ENST00000413380 TPTE2Q6XPS3 522 aa14.54□□□□□ -0.08
HDAC9-206ENST00000413380 RPAP2Q8IXW5 612 aaPredicted RBP14.54□□□□□ -0.08
HDAC9-206ENST00000413380 FAM89AQ96GI7 184 aa14.54□□□□□ -0.08
HDAC9-206ENST00000413380 PCDHB15Q9Y5E8 787 aa14.54□□□□□ -0.08
HDAC9-206ENST00000413380 RTL9Q8NET4 1388 aa14.54□□□□□ -0.08
HDAC9-206ENST00000413380 ABCC12Q96J65 1359 aa14.54□□□□□ -0.08
HDAC9-206ENST00000413380 DLEC1Q9Y238 1755 aa14.53□□□□□ -0.08
HDAC9-206ENST00000413380 LRP5O75197 1615 aa14.53□□□□□ -0.08
HDAC9-206ENST00000413380 SOCS7O14512 581 aa14.53□□□□□ -0.08
HDAC9-206ENST00000413380 IRS4O14654 1257 aaPredicted RBP14.53□□□□□ -0.08
HDAC9-206ENST00000413380 SERPINB2P05120 415 aa14.53□□□□□ -0.08
HDAC9-206ENST00000413380 CSF1RP07333 972 aa14.53□□□□□ -0.08
HDAC9-206ENST00000413380 MMP10P09238 476 aa14.53□□□□□ -0.08
HDAC9-206ENST00000413380 PRR5LQ6MZQ0 368 aa14.53□□□□□ -0.08
HDAC9-206ENST00000413380 BICDL1Q6ZP65 573 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms