RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 CWF19L2Q2TBE0 894 aaKnown RBP23.46■■□□□ 1.35
CDC42-204ENST00000411827 CARMIL3Q8ND23 1372 aa23.46■■□□□ 1.35
CDC42-204ENST00000411827 PSDA5PKW4 1024 aaPredicted RBP23.45■■□□□ 1.34
CDC42-204ENST00000411827 PCCAP05165 728 aaPredicted RBP23.45■■□□□ 1.34
CDC42-204ENST00000411827 ZBTB38Q8NAP3 1195 aaPredicted RBP23.45■■□□□ 1.34
CDC42-204ENST00000411827 UTP14AQ9BVJ6 771 aaKnown RBP23.45■■□□□ 1.34
CDC42-204ENST00000411827 USP44Q9H0E7 712 aa23.45■■□□□ 1.34
CDC42-204ENST00000411827 ANKRD36CQ5JPF3 1778 aa23.45■■□□□ 1.34
CDC42-204ENST00000411827 H7C1W4 665 aa23.44■■□□□ 1.34
CDC42-204ENST00000411827 UBTFL1P0CB47 393 aaPredicted RBP23.44■■□□□ 1.34
CDC42-204ENST00000411827 TM4SF1P30408 202 aa23.44■■□□□ 1.34
CDC42-204ENST00000411827 FKBP8Q14318 412 aa23.44■■□□□ 1.34
CDC42-204ENST00000411827 TBC1D9BQ66K14 1250 aa23.44■■□□□ 1.34
CDC42-204ENST00000411827 TPTE2Q6XPS3 522 aa23.44■■□□□ 1.34
CDC42-204ENST00000411827 SMIM5Q71RC9 77 aa23.44■■□□□ 1.34
CDC42-204ENST00000411827 CRBNQ96SW2 442 aa23.44■■□□□ 1.34
CDC42-204ENST00000411827 ZBTB40Q9NUA8 1239 aa23.44■■□□□ 1.34
CDC42-204ENST00000411827 TUBGCP6Q96RT7 1819 aa23.44■■□□□ 1.34
CDC42-204ENST00000411827 GPTP24298 496 aa23.43■■□□□ 1.34
CDC42-204ENST00000411827 TRMT112Q9UI30 125 aaKnown RBP23.43■■□□□ 1.34
CDC42-204ENST00000411827 NFIXQ14938 502 aa23.42■■□□□ 1.34
CDC42-204ENST00000411827 UBN2Q6ZU65 1347 aa23.41■■□□□ 1.34
CDC42-204ENST00000411827 SH3TC1Q8TE82 1336 aa23.41■■□□□ 1.34
CDC42-204ENST00000411827 CDHR2Q9BYE9 1310 aa23.41■■□□□ 1.34
CDC42-204ENST00000411827 GNAI2P04899 355 aa23.41■■□□□ 1.34
CDC42-204ENST00000411827 NBPF5PQ86XG9 351 aaPredicted RBP23.4■■□□□ 1.34
CDC42-204ENST00000411827 GTF2E1P29083 439 aaPredicted RBP23.39■■□□□ 1.33
CDC42-204ENST00000411827 SUSD4Q5VX71 490 aa23.39■■□□□ 1.33
CDC42-204ENST00000411827 MEIS3Q99687 375 aa23.39■■□□□ 1.33
CDC42-204ENST00000411827 PARP3Q9Y6F1 533 aa23.39■■□□□ 1.33
CDC42-204ENST00000411827 NTSR2O95665 410 aa23.38■■□□□ 1.33
CDC42-204ENST00000411827 R3HDM1Q15032 1099 aaKnown RBP23.38■■□□□ 1.33
CDC42-204ENST00000411827 BICDL1Q6ZP65 573 aa23.38■■□□□ 1.33
CDC42-204ENST00000411827 UBE3BQ7Z3V4 1068 aa23.38■■□□□ 1.33
CDC42-204ENST00000411827 EXOC6Q8TAG9 804 aa23.38■■□□□ 1.33
CDC42-204ENST00000411827 PLA2G12BQ9BX93 195 aa23.38■■□□□ 1.33
CDC42-204ENST00000411827 MTFR1LQ9H019 292 aa23.38■■□□□ 1.33
CDC42-204ENST00000411827 AFDNP55196 1824 aaKnown RBP23.38■■□□□ 1.33
CDC42-204ENST00000411827 NBPF7P0C2Y1 421 aaPredicted RBP23.37■■□□□ 1.33
CDC42-204ENST00000411827 SLC10A5Q5PT55 438 aa23.37■■□□□ 1.33
CDC42-204ENST00000411827 NPHP1O15259 732 aa23.36■■□□□ 1.33
CDC42-204ENST00000411827 SERPINB2P05120 415 aa23.36■■□□□ 1.33
CDC42-204ENST00000411827 CASP7P55210 303 aa23.36■■□□□ 1.33
CDC42-204ENST00000411827 IRX6P78412 446 aaPredicted RBP23.36■■□□□ 1.33
CDC42-204ENST00000411827 RPAP2Q8IXW5 612 aaPredicted RBP23.36■■□□□ 1.33
CDC42-204ENST00000411827 CNBD1Q8NA66 436 aa23.36■■□□□ 1.33
CDC42-204ENST00000411827 COL24A1Q17RW2 1714 aa23.36■■□□□ 1.33
CDC42-204ENST00000411827 RIC1Q4ADV7 1423 aa23.35■■□□□ 1.33
CDC42-204ENST00000411827 POLRMTO00411 1230 aaKnown RBP23.35■■□□□ 1.33
CDC42-204ENST00000411827 MMP10P09238 476 aa23.35■■□□□ 1.33
CDC42-204ENST00000411827 ST5P78524 1137 aa23.35■■□□□ 1.33
CDC42-204ENST00000411827 IRS4O14654 1257 aaPredicted RBP23.34■■□□□ 1.33
CDC42-204ENST00000411827 PDE8AO60658 829 aa23.34■■□□□ 1.33
CDC42-204ENST00000411827 FAM89AQ96GI7 184 aa23.34■■□□□ 1.33
CDC42-204ENST00000411827 LRP5O75197 1615 aa23.33■■□□□ 1.33
CDC42-204ENST00000411827 POLD1P28340 1107 aa23.33■■□□□ 1.33
CDC42-204ENST00000411827 MTX1Q13505 466 aa23.33■■□□□ 1.33
CDC42-204ENST00000411827 HMMRO75330 724 aa23.32■■□□□ 1.32
CDC42-204ENST00000411827 PDZRN3Q9UPQ7 1066 aa23.32■■□□□ 1.32
CDC42-204ENST00000411827 LRRFIP2Q9Y608 721 aaKnown RBP23.32■■□□□ 1.32
CDC42-204ENST00000411827 DDR1Q08345 913 aa23.31■■□□□ 1.32
CDC42-204ENST00000411827 RABL6Q3YEC7 729 aaPredicted RBP23.31■■□□□ 1.32
CDC42-204ENST00000411827 CASZ1Q86V15 1759 aa23.31■■□□□ 1.32
CDC42-204ENST00000411827 NLRP3Q96P20 1036 aa23.3■■□□□ 1.32
CDC42-204ENST00000411827 FAM177BA6PVY3 158 aa23.29■■□□□ 1.32
CDC42-204ENST00000411827 ERFEQ4G0M1 354 aa23.29■■□□□ 1.32
CDC42-204ENST00000411827 PRR5LQ6MZQ0 368 aa23.29■■□□□ 1.32
CDC42-204ENST00000411827 SUCLG2Q96I99 432 aa23.29■■□□□ 1.32
CDC42-204ENST00000411827 BRIP1Q9BX63 1249 aa23.29■■□□□ 1.32
CDC42-204ENST00000411827 CSF1RP07333 972 aa23.28■■□□□ 1.32
CDC42-204ENST00000411827 CTSWP56202 376 aa23.28■■□□□ 1.32
CDC42-204ENST00000411827 ATP8B2P98198 1209 aa23.28■■□□□ 1.32
CDC42-204ENST00000411827 CCDC152Q4G0S7 254 aa23.28■■□□□ 1.32
CDC42-204ENST00000411827 MSL1Q68DK7 614 aa23.28■■□□□ 1.32
CDC42-204ENST00000411827 ANKRD44Q8N8A2 993 aa23.28■■□□□ 1.32
CDC42-204ENST00000411827 PPP4R2Q9NY27 417 aa23.28■■□□□ 1.32
CDC42-204ENST00000411827 FOXO4P98177 505 aa23.27■■□□□ 1.32
CDC42-204ENST00000411827 SF3B3Q15393 1217 aaKnown RBP23.27■■□□□ 1.32
CDC42-204ENST00000411827 RTL5Q5HYW3 569 aaPredicted RBP23.27■■□□□ 1.32
CDC42-204ENST00000411827 NUTM1Q86Y26 1132 aa23.27■■□□□ 1.32
CDC42-204ENST00000411827 KAZALD1Q96I82 304 aa23.27■■□□□ 1.32
CDC42-204ENST00000411827 PDGFDQ9GZP0 370 aaPredicted RBP23.27■■□□□ 1.32
CDC42-204ENST00000411827 RWDD1Q9H446 243 aaPredicted RBP23.27■■□□□ 1.32
CDC42-204ENST00000411827 BICC1Q9H694 974 aaKnown RBP23.27■■□□□ 1.32
CDC42-204ENST00000411827 RTL9Q8NET4 1388 aa23.27■■□□□ 1.31
CDC42-204ENST00000411827 NRXN2Q9P2S2 1712 aa23.26■■□□□ 1.31
CDC42-204ENST00000411827 PDE6BP35913 854 aa23.26■■□□□ 1.31
CDC42-204ENST00000411827 HDAC1Q13547 482 aaPredicted RBP23.26■■□□□ 1.31
CDC42-204ENST00000411827 CEP85Q6P2H3 762 aa23.26■■□□□ 1.31
CDC42-204ENST00000411827 KLRG2A4D1S0 409 aaPredicted RBP23.25■■□□□ 1.31
CDC42-204ENST00000411827 ZBTB7AO95365 584 aa23.25■■□□□ 1.31
CDC42-204ENST00000411827 LMBR1LQ6UX01 489 aa23.25■■□□□ 1.31
CDC42-204ENST00000411827 TTLL11Q8NHH1 800 aa23.25■■□□□ 1.31
CDC42-204ENST00000411827 SPON1Q9HCB6 807 aa23.25■■□□□ 1.31
CDC42-204ENST00000411827 HCLS1P14317 486 aaPredicted RBP23.24■■□□□ 1.31
CDC42-204ENST00000411827 SSH3Q8TE77 659 aa23.24■■□□□ 1.31
CDC42-204ENST00000411827 LAMB2P55268 1798 aa23.23■■□□□ 1.31
CDC42-204ENST00000411827 SRGAP3O43295 1099 aa23.23■■□□□ 1.31
CDC42-204ENST00000411827 CCDC57Q2TAC2 916 aa23.23■■□□□ 1.31
CDC42-204ENST00000411827 SYNE4Q8N205 404 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms