RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 AMPD1P23109 780 aa6.98□□□□□ -1.29
RNU4-55P-201ENST00000410731 DGKZQ13574 1117 aa6.98□□□□□ -1.29
RNU4-55P-201ENST00000410731 ERICH6Q7L0X2 663 aa6.98□□□□□ -1.29
RNU4-55P-201ENST00000410731 SYT9Q86SS6 491 aa6.98□□□□□ -1.29
RNU4-55P-201ENST00000410731 CLP1Q92989 425 aaKnown RBP6.98□□□□□ -1.29
RNU4-55P-201ENST00000410731 COL26A1Q96A83 441 aa6.98□□□□□ -1.29
RNU4-55P-201ENST00000410731 KLK14Q9P0G3 267 aa6.98□□□□□ -1.29
RNU4-55P-201ENST00000410731 CXXC1Q9P0U4 656 aaPredicted RBP6.98□□□□□ -1.29
RNU4-55P-201ENST00000410731 CNTNAP5Q8WYK1 1306 aa6.98□□□□□ -1.29
RNU4-55P-201ENST00000410731 HOXB4P17483 251 aaPredicted RBP6.97□□□□□ -1.29
RNU4-55P-201ENST00000410731 SNRPNP63162 240 aaKnown RBP6.97□□□□□ -1.29
RNU4-55P-201ENST00000410731 NEUROD1Q13562 356 aa6.97□□□□□ -1.29
RNU4-55P-201ENST00000410731 CHSY3Q70JA7 882 aa6.97□□□□□ -1.29
RNU4-55P-201ENST00000410731 TMEM151AQ8N4L1 468 aa6.97□□□□□ -1.29
RNU4-55P-201ENST00000410731 BTBD6Q96KE9 485 aa6.97□□□□□ -1.29
RNU4-55P-201ENST00000410731 MDFIQ99750 246 aa6.97□□□□□ -1.29
RNU4-55P-201ENST00000410731 MKL2Q9ULH7 1088 aa6.97□□□□□ -1.29
RNU4-55P-201ENST00000410731 ELOA3CA0A087WX78 387 aaPredicted RBP6.96□□□□□ -1.3
RNU4-55P-201ENST00000410731 ELOA3DA6NLF2 546 aaPredicted RBP6.96□□□□□ -1.3
RNU4-55P-201ENST00000410731 PPP1R15AO75807 674 aaPredicted RBP6.96□□□□□ -1.3
RNU4-55P-201ENST00000410731 GDF11O95390 407 aa6.96□□□□□ -1.3
RNU4-55P-201ENST00000410731 EPB42P16452 691 aa6.96□□□□□ -1.3
RNU4-55P-201ENST00000410731 DGKGP49619 791 aa6.96□□□□□ -1.3
RNU4-55P-201ENST00000410731 C11orf91Q3C1V1 193 aa6.96□□□□□ -1.3
RNU4-55P-201ENST00000410731 ELOA3BQ3SY89 546 aa6.96□□□□□ -1.3
RNU4-55P-201ENST00000410731 ELOA3Q8NG57 546 aa6.96□□□□□ -1.3
RNU4-55P-201ENST00000410731 TNFRSF25Q93038 417 aa6.96□□□□□ -1.3
RNU4-55P-201ENST00000410731 RRAGCQ9HB90 399 aa6.96□□□□□ -1.3
RNU4-55P-201ENST00000410731 ADARB2-AS1A8MUL3 147 aa6.95□□□□□ -1.3
RNU4-55P-201ENST00000410731 INPP5BP32019 993 aa6.95□□□□□ -1.3
RNU4-55P-201ENST00000410731 IDH3AP50213 366 aa6.95□□□□□ -1.3
RNU4-55P-201ENST00000410731 RAB44Q7Z6P3 723 aaPredicted RBP6.95□□□□□ -1.3
RNU4-55P-201ENST00000410731 EFCC1Q9HA90 598 aa6.95□□□□□ -1.3
RNU4-55P-201ENST00000410731 LRFN2Q9ULH4 789 aa6.95□□□□□ -1.3
RNU4-55P-201ENST00000410731 ARSDP51689 593 aa6.94□□□□□ -1.3
RNU4-55P-201ENST00000410731 COX20Q5RI15 118 aa6.94□□□□□ -1.3
RNU4-55P-201ENST00000410731 LINC00114Q6XXX2 140 aa6.94□□□□□ -1.3
RNU4-55P-201ENST00000410731 SLAIN2Q9P270 581 aa6.94□□□□□ -1.3
RNU4-55P-201ENST00000410731 PIK3R2O00459 728 aa6.93□□□□□ -1.3
RNU4-55P-201ENST00000410731 PTCD1O75127 700 aaKnown RBP6.93□□□□□ -1.3
RNU4-55P-201ENST00000410731 MICAL2O94851 1124 aa6.93□□□□□ -1.3
RNU4-55P-201ENST00000410731 ALAS2P22557 587 aa6.93□□□□□ -1.3
RNU4-55P-201ENST00000410731 GRNP28799 593 aaKnown RBP6.93□□□□□ -1.3
RNU4-55P-201ENST00000410731 C16orf46Q6P387 395 aa6.93□□□□□ -1.3
RNU4-55P-201ENST00000410731 BHMTQ93088 406 aa6.93□□□□□ -1.3
RNU4-55P-201ENST00000410731 IFT43Q96FT9 208 aa6.93□□□□□ -1.3
RNU4-55P-201ENST00000410731 MKNK1Q9BUB5 465 aa6.93□□□□□ -1.3
RNU4-55P-201ENST00000410731 C11orf16Q9NQ32 467 aa6.93□□□□□ -1.3
RNU4-55P-201ENST00000410731 GNB5O14775 395 aa6.92□□□□□ -1.3
RNU4-55P-201ENST00000410731 ATP2B4P23634 1241 aa6.92□□□□□ -1.3
RNU4-55P-201ENST00000410731 ADH7P40394 386 aa6.92□□□□□ -1.3
RNU4-55P-201ENST00000410731 CCINQ13939 588 aa6.92□□□□□ -1.3
RNU4-55P-201ENST00000410731 GSX2Q9BZM3 304 aa6.92□□□□□ -1.3
RNU4-55P-201ENST00000410731 ALYREFQ86V81 257 aaKnown RBP6.91□□□□□ -1.3
RNU4-55P-201ENST00000410731 TREML1Q86YW5 311 aa6.91□□□□□ -1.3
RNU4-55P-201ENST00000410731 DCAF5Q96JK2 942 aa6.91□□□□□ -1.3
RNU4-55P-201ENST00000410731 SAP130Q9H0E3 1048 aa6.91□□□□□ -1.3
RNU4-55P-201ENST00000410731 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.91□□□□□ -1.3
RNU4-55P-201ENST00000410731 TMEM88BA6NKF7 163 aa6.9□□□□□ -1.3
RNU4-55P-201ENST00000410731 TNFRSF10BO14763 440 aa6.9□□□□□ -1.3
RNU4-55P-201ENST00000410731 NFKB1P19838 968 aa6.9□□□□□ -1.3
RNU4-55P-201ENST00000410731 CAPN12Q6ZSI9 719 aa6.9□□□□□ -1.3
RNU4-55P-201ENST00000410731 KCTD17Q8N5Z5 321 aa6.9□□□□□ -1.3
RNU4-55P-201ENST00000410731 PNMA5Q96PV4 448 aa6.9□□□□□ -1.3
RNU4-55P-201ENST00000410731 OPLAHO14841 1288 aa6.89□□□□□ -1.31
RNU4-55P-201ENST00000410731 BRD2P25440 801 aaKnown RBP6.89□□□□□ -1.31
RNU4-55P-201ENST00000410731 ETFBKMTQ8IXQ9 262 aa6.89□□□□□ -1.31
RNU4-55P-201ENST00000410731 NOP53Q9NZM5 478 aaKnown RBP6.89□□□□□ -1.31
RNU4-55P-201ENST00000410731 STARD13Q9Y3M8 1113 aa6.89□□□□□ -1.31
RNU4-55P-201ENST00000410731 MAP3K6O95382 1288 aa6.88□□□□□ -1.31
RNU4-55P-201ENST00000410731 COL8A1P27658 744 aa6.88□□□□□ -1.31
RNU4-55P-201ENST00000410731 NAA30Q147X3 362 aaPredicted RBP6.88□□□□□ -1.31
RNU4-55P-201ENST00000410731 UBE2OQ9C0C9 1292 aaKnown RBP6.88□□□□□ -1.31
RNU4-55P-201ENST00000410731 SUV39H2Q9H5I1 410 aa6.88□□□□□ -1.31
RNU4-55P-201ENST00000410731 PRDM6Q9NQX0 595 aa6.88□□□□□ -1.31
RNU4-55P-201ENST00000410731 RTCBQ9Y3I0 505 aaKnown RBP6.88□□□□□ -1.31
RNU4-55P-201ENST00000410731 M0R082 166 aa6.87□□□□□ -1.31
RNU4-55P-201ENST00000410731 EGFRP00533 1210 aa6.87□□□□□ -1.31
RNU4-55P-201ENST00000410731 ALBP02768 609 aa6.87□□□□□ -1.31
RNU4-55P-201ENST00000410731 RGL4Q8IZJ4 473 aa6.87□□□□□ -1.31
RNU4-55P-201ENST00000410731 ZNF417Q8TAU3 575 aa6.87□□□□□ -1.31
RNU4-55P-201ENST00000410731 ZNF587Q96SQ5 575 aaPredicted RBP6.87□□□□□ -1.31
RNU4-55P-201ENST00000410731 DNAJB12Q9NXW2 375 aaKnown RBP6.87□□□□□ -1.31
RNU4-55P-201ENST00000410731 SLC6A14Q9UN76 642 aa6.87□□□□□ -1.31
RNU4-55P-201ENST00000410731 TBC1D8BQ0IIM8 1120 aa6.86□□□□□ -1.31
RNU4-55P-201ENST00000410731 FAM26DQ5JW98 314 aa6.86□□□□□ -1.31
RNU4-55P-201ENST00000410731 C20orf204Q6ZNR8 217 aa6.86□□□□□ -1.31
RNU4-55P-201ENST00000410731 MICALL1Q8N3F8 863 aa6.86□□□□□ -1.31
RNU4-55P-201ENST00000410731 TRIM11Q96F44 468 aa6.86□□□□□ -1.31
RNU4-55P-201ENST00000410731 ZFATQ9P243 1243 aa6.86□□□□□ -1.31
RNU4-55P-201ENST00000410731 STIM2Q9P246 746 aa6.86□□□□□ -1.31
RNU4-55P-201ENST00000410731 USP20Q9Y2K6 914 aa6.86□□□□□ -1.31
RNU4-55P-201ENST00000410731 KCNMB2Q9Y691 235 aa6.86□□□□□ -1.31
RNU4-55P-201ENST00000410731 XYLBO75191 536 aa6.85□□□□□ -1.31
RNU4-55P-201ENST00000410731 IGHA1P01876 353 aa6.85□□□□□ -1.31
RNU4-55P-201ENST00000410731 RARAP10276 462 aa6.85□□□□□ -1.31
RNU4-55P-201ENST00000410731 SSFA2P28290 1259 aa6.85□□□□□ -1.31
RNU4-55P-201ENST00000410731 PCSK7Q16549 785 aa6.85□□□□□ -1.31
RNU4-55P-201ENST00000410731 PLA2G4EQ3MJ16 856 aa6.85□□□□□ -1.31
RNU4-55P-201ENST00000410731 KRT25Q7Z3Z0 450 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms