RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 IL25Q9H293 177 aa28.71■■■□□ 2.19
PMS1-205ENST00000409985 SLC52A2Q9HAB3 445 aa28.71■■■□□ 2.19
PMS1-205ENST00000409985 PDIA6Q15084 440 aa28.7■■■□□ 2.19
PMS1-205ENST00000409985 DDB1Q16531 1140 aa28.7■■■□□ 2.19
PMS1-205ENST00000409985 ZSCAN23Q3MJ62 389 aa28.7■■■□□ 2.19
PMS1-205ENST00000409985 ZNF790Q6PG37 636 aa28.7■■■□□ 2.19
PMS1-205ENST00000409985 KCNB2Q92953 911 aa28.7■■■□□ 2.19
PMS1-205ENST00000409985 MRC1P22897 1456 aa28.7■■■□□ 2.19
PMS1-205ENST00000409985 HIP1O00291 1037 aa28.7■■■□□ 2.18
PMS1-205ENST00000409985 EXOC5O00471 708 aa28.7■■■□□ 2.18
PMS1-205ENST00000409985 PRPF40AO75400 957 aaKnown RBP28.7■■■□□ 2.18
PMS1-205ENST00000409985 SEPT12Q8IYM1 358 aa28.7■■■□□ 2.18
PMS1-205ENST00000409985 TTC14Q96N46 770 aa28.7■■■□□ 2.18
PMS1-205ENST00000409985 SNX14Q9Y5W7 946 aa28.7■■■□□ 2.18
PMS1-205ENST00000409985 MARCH10Q8NA82 808 aaPredicted RBP28.69■■■□□ 2.18
PMS1-205ENST00000409985 EVI5LQ96CN4 794 aa28.69■■■□□ 2.18
PMS1-205ENST00000409985 ANP32BQ92688 251 aaKnown RBP28.68■■■□□ 2.18
PMS1-205ENST00000409985 KDM6AO15550 1401 aaPredicted RBP28.68■■■□□ 2.18
PMS1-205ENST00000409985 PCDH11XQ9BZA7 1347 aa28.68■■■□□ 2.18
PMS1-205ENST00000409985 PCDH11YQ9BZA8 1340 aa28.68■■■□□ 2.18
PMS1-205ENST00000409985 IFIT2P09913 472 aaKnown RBP28.68■■■□□ 2.18
PMS1-205ENST00000409985 NASPP49321 788 aaPredicted RBP28.68■■■□□ 2.18
PMS1-205ENST00000409985 TM6SF1Q9BZW5 370 aa28.68■■■□□ 2.18
PMS1-205ENST00000409985 BRWD3Q6RI45 1802 aa28.68■■■□□ 2.18
PMS1-205ENST00000409985 WDR33Q9C0J8 1336 aaKnown RBP28.67■■■□□ 2.18
PMS1-205ENST00000409985 A0A0G2JS52 829 aa28.67■■■□□ 2.18
PMS1-205ENST00000409985 CAVIN1Q6NZI2 390 aaKnown RBP28.67■■■□□ 2.18
PMS1-205ENST00000409985 DIAPH3Q9NSV4 1193 aa28.67■■■□□ 2.18
PMS1-205ENST00000409985 COL15A1P39059 1388 aa28.66■■■□□ 2.18
PMS1-205ENST00000409985 RXRBP28702 533 aa28.66■■■□□ 2.18
PMS1-205ENST00000409985 IFNL2Q8IZJ0 200 aa28.66■■■□□ 2.18
PMS1-205ENST00000409985 SNRKQ9NRH2 765 aa28.66■■■□□ 2.18
PMS1-205ENST00000409985 CWF19L2Q2TBE0 894 aaKnown RBP28.66■■■□□ 2.18
PMS1-205ENST00000409985 GPT2Q8TD30 523 aa28.66■■■□□ 2.18
PMS1-205ENST00000409985 UPF3BQ9BZI7 483 aaKnown RBP28.66■■■□□ 2.18
PMS1-205ENST00000409985 NEXNQ0ZGT2 675 aa28.65■■■□□ 2.18
PMS1-205ENST00000409985 FAM182BQ5T319 152 aa28.65■■■□□ 2.18
PMS1-205ENST00000409985 TRIM44Q96DX7 344 aaPredicted RBP28.65■■■□□ 2.18
PMS1-205ENST00000409985 KAZALD1Q96I82 304 aa28.65■■■□□ 2.18
PMS1-205ENST00000409985 MAP4K4O95819 1239 aaPredicted RBP28.64■■■□□ 2.18
PMS1-205ENST00000409985 G3BP1Q13283 466 aaKnown RBP eCLIP28.64■■■□□ 2.18
PMS1-205ENST00000409985 SUCLG2Q96I99 432 aa28.64■■■□□ 2.18
PMS1-205ENST00000409985 C5P01031 1676 aa28.64■■■□□ 2.18
PMS1-205ENST00000409985 LIMCH1Q9UPQ0 1083 aa28.63■■■□□ 2.17
PMS1-205ENST00000409985 TOGARAM1Q9Y4F4 1720 aa28.63■■■□□ 2.17
PMS1-205ENST00000409985 NKX1-1Q15270 411 aaPredicted RBP28.63■■■□□ 2.17
PMS1-205ENST00000409985 KLHL34Q8N239 644 aa28.63■■■□□ 2.17
PMS1-205ENST00000409985 PRAMEF22A3QJZ6 481 aa28.62■■■□□ 2.17
PMS1-205ENST00000409985 CWC27Q6UX04 472 aaKnown RBP28.62■■■□□ 2.17
PMS1-205ENST00000409985 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.62■■■□□ 2.17
PMS1-205ENST00000409985 ESPNB1AK53 854 aa28.61■■■□□ 2.17
PMS1-205ENST00000409985 NCLP19338 710 aaKnown RBP28.61■■■□□ 2.17
PMS1-205ENST00000409985 RIC3Q7Z5B4 369 aa28.61■■■□□ 2.17
PMS1-205ENST00000409985 DCAF5Q96JK2 942 aa28.61■■■□□ 2.17
PMS1-205ENST00000409985 METTL22Q9BUU2 404 aaPredicted RBP28.61■■■□□ 2.17
PMS1-205ENST00000409985 BICC1Q9H694 974 aaKnown RBP28.61■■■□□ 2.17
PMS1-205ENST00000409985 IGKV5-2P06315 115 aa28.61■■■□□ 2.17
PMS1-205ENST00000409985 SASH1O94885 1247 aa28.6■■■□□ 2.17
PMS1-205ENST00000409985 PDIA4P13667 645 aaKnown RBP28.6■■■□□ 2.17
PMS1-205ENST00000409985 ZSCAN31Q96LW9 406 aaPredicted RBP28.6■■■□□ 2.17
PMS1-205ENST00000409985 NEURL1BA8MQ27 555 aa28.59■■■□□ 2.17
PMS1-205ENST00000409985 VPS53Q5VIR6 699 aa28.59■■■□□ 2.17
PMS1-205ENST00000409985 LRSAM1Q6UWE0 723 aa28.59■■■□□ 2.17
PMS1-205ENST00000409985 AACSQ86V21 672 aa28.59■■■□□ 2.17
PMS1-205ENST00000409985 TMEM87AQ8NBN3 555 aa28.59■■■□□ 2.17
PMS1-205ENST00000409985 SNRPA1P09661 255 aaKnown RBP28.59■■■□□ 2.17
PMS1-205ENST00000409985 GCKRQ14397 625 aa28.59■■■□□ 2.17
PMS1-205ENST00000409985 HS1BP3Q53T59 392 aa28.59■■■□□ 2.17
PMS1-205ENST00000409985 RASEFQ8IZ41 740 aa28.59■■■□□ 2.17
PMS1-205ENST00000409985 SYAP1Q96A49 352 aaPredicted RBP28.59■■■□□ 2.17
PMS1-205ENST00000409985 PA2G4Q9UQ80 394 aaKnown RBP28.59■■■□□ 2.17
PMS1-205ENST00000409985 ZSWIM6Q9HCJ5 1215 aa28.57■■■□□ 2.16
PMS1-205ENST00000409985 SH2B1Q9NRF2 756 aaPredicted RBP28.57■■■□□ 2.16
PMS1-205ENST00000409985 AK2P54819 239 aa28.57■■■□□ 2.16
PMS1-205ENST00000409985 NECTIN1Q15223 517 aa28.57■■■□□ 2.16
PMS1-205ENST00000409985 LRP10Q7Z4F1 713 aa28.57■■■□□ 2.16
PMS1-205ENST00000409985 NFATC2IPQ8NCF5 419 aa28.56■■■□□ 2.16
PMS1-205ENST00000409985 EAF2Q96CJ1 260 aaPredicted RBP28.55■■■□□ 2.16
PMS1-205ENST00000409985 COPRSQ9NQ92 184 aa28.55■■■□□ 2.16
PMS1-205ENST00000409985 CCDC171Q6TFL3 1326 aa28.55■■■□□ 2.16
PMS1-205ENST00000409985 RUFY3Q7L099 469 aa28.55■■■□□ 2.16
PMS1-205ENST00000409985 TMEM63CQ9P1W3 806 aa28.55■■■□□ 2.16
PMS1-205ENST00000409985 ERBB4Q15303 1308 aa28.54■■■□□ 2.16
PMS1-205ENST00000409985 AIMP1Q12904 312 aaKnown RBP28.54■■■□□ 2.16
PMS1-205ENST00000409985 ANKRD13DQ6ZTN6 518 aa28.54■■■□□ 2.16
PMS1-205ENST00000409985 XAGE3Q8WTP9 111 aa28.54■■■□□ 2.16
PMS1-205ENST00000409985 MAP4K1Q92918 833 aa28.54■■■□□ 2.16
PMS1-205ENST00000409985 FMNL2Q96PY5 1086 aa28.54■■■□□ 2.16
PMS1-205ENST00000409985 DOT1LQ8TEK3 1739 aa28.53■■■□□ 2.16
PMS1-205ENST00000409985 ZKSCAN1P17029 563 aaPredicted RBP28.53■■■□□ 2.16
PMS1-205ENST00000409985 COPS6Q7L5N1 327 aa28.53■■■□□ 2.16
PMS1-205ENST00000409985 ZNF496Q96IT1 587 aaPredicted RBP28.53■■■□□ 2.16
PMS1-205ENST00000409985 ATP6V1DQ9Y5K8 247 aa28.53■■■□□ 2.16
PMS1-205ENST00000409985 RPAP1Q9BWH6 1393 aaPredicted RBP28.53■■■□□ 2.16
PMS1-205ENST00000409985 SLC39A6Q13433 755 aa28.53■■■□□ 2.16
PMS1-205ENST00000409985 TTC5Q8N0Z6 440 aa28.53■■■□□ 2.16
PMS1-205ENST00000409985 ALDH8A1Q9H2A2 487 aaPredicted RBP28.53■■■□□ 2.16
PMS1-205ENST00000409985 CYP46A1Q9Y6A2 500 aa28.53■■■□□ 2.16
PMS1-205ENST00000409985 RFX7Q2KHR2 1363 aa28.53■■■□□ 2.16
PMS1-205ENST00000409985 LAMB4A4D0S4 1761 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms