RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 VSIG10Q8N0Z9 540 aa24.04■■□□□ 1.44
LIMS2-207ENST00000409808 AFDNP55196 1824 aaKnown RBP24.04■■□□□ 1.44
LIMS2-207ENST00000409808 MCM2P49736 904 aa24.04■■□□□ 1.44
LIMS2-207ENST00000409808 POLA2Q14181 598 aa24.04■■□□□ 1.44
LIMS2-207ENST00000409808 KAZALD1Q96I82 304 aa24.04■■□□□ 1.44
LIMS2-207ENST00000409808 ZBTB3Q9H5J0 574 aa24.04■■□□□ 1.44
LIMS2-207ENST00000409808 TRIM44Q96DX7 344 aaPredicted RBP24.03■■□□□ 1.44
LIMS2-207ENST00000409808 KCNQ2O43526 872 aa24.02■■□□□ 1.44
LIMS2-207ENST00000409808 UTYO14607 1347 aa24.02■■□□□ 1.44
LIMS2-207ENST00000409808 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.02■■□□□ 1.44
LIMS2-207ENST00000409808 ESPNB1AK53 854 aa24.01■■□□□ 1.43
LIMS2-207ENST00000409808 TEX13AQ9BXU3 409 aaPredicted RBP24.01■■□□□ 1.43
LIMS2-207ENST00000409808 ZNF445P59923 1031 aa24.01■■□□□ 1.43
LIMS2-207ENST00000409808 CCDC173Q0VFZ6 552 aa24.01■■□□□ 1.43
LIMS2-207ENST00000409808 LRRCC1Q9C099 1032 aa24.01■■□□□ 1.43
LIMS2-207ENST00000409808 BICC1Q9H694 974 aaKnown RBP24.01■■□□□ 1.43
LIMS2-207ENST00000409808 SALL3Q9BXA9 1300 aa24■■□□□ 1.43
LIMS2-207ENST00000409808 SURF6O75683 361 aaKnown RBP24■■□□□ 1.43
LIMS2-207ENST00000409808 STARD3NLO95772 234 aa24■■□□□ 1.43
LIMS2-207ENST00000409808 NUP188Q5SRE5 1749 aa24■■□□□ 1.43
LIMS2-207ENST00000409808 ANP32BQ92688 251 aaKnown RBP24■■□□□ 1.43
LIMS2-207ENST00000409808 CYP19A1P11511 503 aaPredicted RBP23.99■■□□□ 1.43
LIMS2-207ENST00000409808 MCCP23508 829 aa23.99■■□□□ 1.43
LIMS2-207ENST00000409808 MCTP1Q6DN14 999 aa23.99■■□□□ 1.43
LIMS2-207ENST00000409808 PPP1R9BQ96SB3 815 aa23.99■■□□□ 1.43
LIMS2-207ENST00000409808 EPB41L2O43491 1005 aaKnown RBP23.98■■□□□ 1.43
LIMS2-207ENST00000409808 ANAPC15P60006 121 aa23.98■■□□□ 1.43
LIMS2-207ENST00000409808 EPHA10Q5JZY3 1008 aa23.98■■□□□ 1.43
LIMS2-207ENST00000409808 LMBRD1Q9NUN5 540 aa23.98■■□□□ 1.43
LIMS2-207ENST00000409808 UBE3BQ7Z3V4 1068 aa23.98■■□□□ 1.43
LIMS2-207ENST00000409808 STAP2Q9UGK3 403 aa23.98■■□□□ 1.43
LIMS2-207ENST00000409808 AFF2P51816 1311 aa23.97■■□□□ 1.43
LIMS2-207ENST00000409808 MTX1Q13505 466 aa23.97■■□□□ 1.43
LIMS2-207ENST00000409808 IL1RAPL2Q9NP60 686 aa23.97■■□□□ 1.43
LIMS2-207ENST00000409808 PA2G4Q9UQ80 394 aaKnown RBP23.97■■□□□ 1.43
LIMS2-207ENST00000409808 AOX1Q06278 1338 aa23.97■■□□□ 1.43
LIMS2-207ENST00000409808 TJP1Q07157 1748 aa23.97■■□□□ 1.43
LIMS2-207ENST00000409808 FAM182BQ5T319 152 aa23.96■■□□□ 1.43
LIMS2-207ENST00000409808 ESYT1Q9BSJ8 1104 aa23.96■■□□□ 1.43
LIMS2-207ENST00000409808 ZBTB1Q9Y2K1 713 aa23.96■■□□□ 1.43
LIMS2-207ENST00000409808 A0A087WZG4 1122 aa23.96■■□□□ 1.43
LIMS2-207ENST00000409808 MX1P20591 662 aa23.96■■□□□ 1.43
LIMS2-207ENST00000409808 NASPP49321 788 aaPredicted RBP23.96■■□□□ 1.43
LIMS2-207ENST00000409808 TSHZ3Q63HK5 1081 aa23.96■■□□□ 1.43
LIMS2-207ENST00000409808 IL17RAQ96F46 866 aa23.96■■□□□ 1.43
LIMS2-207ENST00000409808 PTF1AQ7RTS3 328 aa23.95■■□□□ 1.42
LIMS2-207ENST00000409808 HDAC5Q9UQL6 1122 aa23.94■■□□□ 1.42
LIMS2-207ENST00000409808 ATP6V1AP38606 617 aa23.93■■□□□ 1.42
LIMS2-207ENST00000409808 ZGPATQ8N5A5 531 aaKnown RBP23.92■■□□□ 1.42
LIMS2-207ENST00000409808 RHPN1Q8TCX5 695 aa23.92■■□□□ 1.42
LIMS2-207ENST00000409808 GJD4Q96KN9 370 aaPredicted RBP23.92■■□□□ 1.42
LIMS2-207ENST00000409808 LOC102724428A0A0B4J2F2 783 aa23.92■■□□□ 1.42
LIMS2-207ENST00000409808 NEK4P51957 841 aa23.92■■□□□ 1.42
LIMS2-207ENST00000409808 CASP7P55210 303 aa23.92■■□□□ 1.42
LIMS2-207ENST00000409808 SIK1P57059 783 aa23.92■■□□□ 1.42
LIMS2-207ENST00000409808 CHMLP26374 656 aa23.91■■□□□ 1.42
LIMS2-207ENST00000409808 CUL4AQ13619 759 aa23.91■■□□□ 1.42
LIMS2-207ENST00000409808 KLHDC4Q8TBB5 520 aa23.91■■□□□ 1.42
LIMS2-207ENST00000409808 INTS4Q96HW7 963 aaKnown RBP23.91■■□□□ 1.42
LIMS2-207ENST00000409808 CWC25Q9NXE8 425 aaPredicted RBP23.91■■□□□ 1.42
LIMS2-207ENST00000409808 PALLDQ8WX93 1383 aa23.9■■□□□ 1.42
LIMS2-207ENST00000409808 RAB11FIP3O75154 756 aa23.9■■□□□ 1.42
LIMS2-207ENST00000409808 OS9Q13438 667 aaPredicted RBP23.9■■□□□ 1.42
LIMS2-207ENST00000409808 ITPK1Q13572 414 aa23.9■■□□□ 1.42
LIMS2-207ENST00000409808 ZSCAN23Q3MJ62 389 aa23.9■■□□□ 1.42
LIMS2-207ENST00000409808 KIF6Q6ZMV9 814 aa23.9■■□□□ 1.42
LIMS2-207ENST00000409808 ZDHHC9Q9Y397 364 aa23.9■■□□□ 1.42
LIMS2-207ENST00000409808 HLFQ16534 295 aa23.9■■□□□ 1.42
LIMS2-207ENST00000409808 NUTM1Q86Y26 1132 aa23.9■■□□□ 1.42
LIMS2-207ENST00000409808 TMX3Q96JJ7 454 aa23.9■■□□□ 1.42
LIMS2-207ENST00000409808 THSD7AQ9UPZ6 1657 aa23.89■■□□□ 1.42
LIMS2-207ENST00000409808 PKP1Q13835 747 aa23.89■■□□□ 1.42
LIMS2-207ENST00000409808 H7C1W4 665 aa23.89■■□□□ 1.41
LIMS2-207ENST00000409808 CAVIN1Q6NZI2 390 aaKnown RBP23.89■■□□□ 1.41
LIMS2-207ENST00000409808 NCLP19338 710 aaKnown RBP23.88■■□□□ 1.41
LIMS2-207ENST00000409808 KCNQ4P56696 695 aa23.88■■□□□ 1.41
LIMS2-207ENST00000409808 TCIRG1Q13488 830 aa23.88■■□□□ 1.41
LIMS2-207ENST00000409808 KIF1BPQ96EK5 621 aa23.88■■□□□ 1.41
LIMS2-207ENST00000409808 SIL1Q9H173 461 aa23.88■■□□□ 1.41
LIMS2-207ENST00000409808 TBC1D2BQ9UPU7 963 aa23.88■■□□□ 1.41
LIMS2-207ENST00000409808 MAP3K15Q6ZN16 1313 aa23.87■■□□□ 1.41
LIMS2-207ENST00000409808 TUBGCP6Q96RT7 1819 aa23.87■■□□□ 1.41
LIMS2-207ENST00000409808 PRPF40AO75400 957 aaKnown RBP23.87■■□□□ 1.41
LIMS2-207ENST00000409808 HS1BP3Q53T59 392 aa23.87■■□□□ 1.41
LIMS2-207ENST00000409808 INTS5Q6P9B9 1019 aaKnown RBP23.87■■□□□ 1.41
LIMS2-207ENST00000409808 CCDC191Q8NCU4 936 aa23.87■■□□□ 1.41
LIMS2-207ENST00000409808 NAP1L5Q96NT1 182 aaPredicted RBP23.87■■□□□ 1.41
LIMS2-207ENST00000409808 ISCA1Q9BUE6 129 aa23.87■■□□□ 1.41
LIMS2-207ENST00000409808 CRKLP46109 303 aaKnown RBP23.87■■□□□ 1.41
LIMS2-207ENST00000409808 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.87■■□□□ 1.41
LIMS2-207ENST00000409808 TRIM6-TRIM34B2RNG4 842 aa23.86■■□□□ 1.41
LIMS2-207ENST00000409808 MBD3O95983 291 aa23.86■■□□□ 1.41
LIMS2-207ENST00000409808 MYH14Q7Z406 1995 aaKnown RBP23.85■■□□□ 1.41
LIMS2-207ENST00000409808 GPTP24298 496 aa23.85■■□□□ 1.41
LIMS2-207ENST00000409808 HSP90AB4PQ58FF6 505 aa23.85■■□□□ 1.41
LIMS2-207ENST00000409808 RILPL2Q969X0 211 aa23.85■■□□□ 1.41
LIMS2-207ENST00000409808 BRD1O95696 1058 aa23.84■■□□□ 1.41
LIMS2-207ENST00000409808 FOXO4P98177 505 aa23.84■■□□□ 1.41
LIMS2-207ENST00000409808 CCDC87Q9NVE4 849 aa23.84■■□□□ 1.41
LIMS2-207ENST00000409808 IL6STP40189 918 aaPredicted RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms