RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 SIPA1L3O60292 1781 aaPredicted RBP18.15■□□□□ 0.5
LYSMD4-204ENST00000409796 GRM8O00222 908 aa18.15■□□□□ 0.5
LYSMD4-204ENST00000409796 NMIQ13287 307 aaPredicted RBP18.15■□□□□ 0.5
LYSMD4-204ENST00000409796 ME3Q16798 604 aa18.15■□□□□ 0.5
LYSMD4-204ENST00000409796 CREB3L3Q68CJ9 461 aa18.15■□□□□ 0.5
LYSMD4-204ENST00000409796 MPNDQ8N594 471 aa18.15■□□□□ 0.5
LYSMD4-204ENST00000409796 EAF2Q96CJ1 260 aaPredicted RBP18.15■□□□□ 0.5
LYSMD4-204ENST00000409796 HDAC5Q9UQL6 1122 aa18.15■□□□□ 0.5
LYSMD4-204ENST00000409796 NECAB1Q8N987 351 aa18.14■□□□□ 0.49
LYSMD4-204ENST00000409796 LINS1Q8NG48 757 aa18.14■□□□□ 0.49
LYSMD4-204ENST00000409796 CCDC8Q9H0W5 538 aaPredicted RBP18.14■□□□□ 0.49
LYSMD4-204ENST00000409796 BICC1Q9H694 974 aaKnown RBP18.14■□□□□ 0.49
LYSMD4-204ENST00000409796 OVOS2A0A0G2JMS6 1433 aa18.14■□□□□ 0.49
LYSMD4-204ENST00000409796 ARHGEF25Q86VW2 580 aa18.14■□□□□ 0.49
LYSMD4-204ENST00000409796 GCP02774 474 aa18.13■□□□□ 0.49
LYSMD4-204ENST00000409796 ZKSCAN1P17029 563 aaPredicted RBP18.13■□□□□ 0.49
LYSMD4-204ENST00000409796 AIMP1Q12904 312 aaKnown RBP18.13■□□□□ 0.49
LYSMD4-204ENST00000409796 G3BP1Q13283 466 aaKnown RBP eCLIP18.13■□□□□ 0.49
LYSMD4-204ENST00000409796 ANKRD24Q8TF21 1146 aa18.13■□□□□ 0.49
LYSMD4-204ENST00000409796 TLR7Q9NYK1 1049 aaKnown RBP18.13■□□□□ 0.49
LYSMD4-204ENST00000409796 UQCRHLA0A096LP55 91 aa18.13■□□□□ 0.49
LYSMD4-204ENST00000409796 VPS37CA5D8V6 355 aaPredicted RBP18.13■□□□□ 0.49
LYSMD4-204ENST00000409796 UQCRHP07919 91 aa18.13■□□□□ 0.49
LYSMD4-204ENST00000409796 KCNJ4P48050 445 aa18.13■□□□□ 0.49
LYSMD4-204ENST00000409796 COL9A3Q14050 684 aaPredicted RBP18.13■□□□□ 0.49
LYSMD4-204ENST00000409796 MAP4K1Q92918 833 aa18.13■□□□□ 0.49
LYSMD4-204ENST00000409796 FAM13BQ9NYF5 915 aa18.13■□□□□ 0.49
LYSMD4-204ENST00000409796 TPCN1Q9ULQ1 816 aa18.12■□□□□ 0.49
LYSMD4-204ENST00000409796 UTYO14607 1347 aa18.12■□□□□ 0.49
LYSMD4-204ENST00000409796 ADCY5O95622 1261 aa18.12■□□□□ 0.49
LYSMD4-204ENST00000409796 KIAA2012Q0VF49 1180 aa18.12■□□□□ 0.49
LYSMD4-204ENST00000409796 GIMAP6Q6P9H5 292 aa18.12■□□□□ 0.49
LYSMD4-204ENST00000409796 FUCA2Q9BTY2 467 aa18.12■□□□□ 0.49
LYSMD4-204ENST00000409796 ZNF830Q96NB3 372 aaPredicted RBP18.11■□□□□ 0.49
LYSMD4-204ENST00000409796 DDX21Q9NR30 783 aaKnown RBP eCLIP18.11■□□□□ 0.49
LYSMD4-204ENST00000409796 A0A0D9SFI3 127 aa18.11■□□□□ 0.49
LYSMD4-204ENST00000409796 HIP1O00291 1037 aa18.11■□□□□ 0.49
LYSMD4-204ENST00000409796 SLC27A2O14975 620 aa18.11■□□□□ 0.49
LYSMD4-204ENST00000409796 SIL1Q9H173 461 aa18.11■□□□□ 0.49
LYSMD4-204ENST00000409796 BOLA2Q9H3K6 86 aa18.11■□□□□ 0.49
LYSMD4-204ENST00000409796 DDX58O95786 925 aaKnown RBP18.1■□□□□ 0.49
LYSMD4-204ENST00000409796 PDIA6Q15084 440 aa18.1■□□□□ 0.49
LYSMD4-204ENST00000409796 SLIT3O75094 1523 aa18.1■□□□□ 0.49
LYSMD4-204ENST00000409796 IGKV5-2P06315 115 aa18.09■□□□□ 0.49
LYSMD4-204ENST00000409796 KLHDC4Q8TBB5 520 aa18.09■□□□□ 0.49
LYSMD4-204ENST00000409796 ORAI2Q96SN7 254 aa18.09■□□□□ 0.49
LYSMD4-204ENST00000409796 SNRKQ9NRH2 765 aa18.09■□□□□ 0.49
LYSMD4-204ENST00000409796 LMOD2Q6P5Q4 547 aa18.09■□□□□ 0.49
LYSMD4-204ENST00000409796 SASS6Q6UVJ0 657 aa18.09■□□□□ 0.49
LYSMD4-204ENST00000409796 ANKLE2Q86XL3 938 aa18.09■□□□□ 0.49
LYSMD4-204ENST00000409796 MAP7D2Q96T17 732 aa18.09■□□□□ 0.49
LYSMD4-204ENST00000409796 FSD1Q9BTV5 496 aa18.09■□□□□ 0.49
LYSMD4-204ENST00000409796 AXIN2Q9Y2T1 843 aa18.09■□□□□ 0.49
LYSMD4-204ENST00000409796 CAMTA1Q9Y6Y1 1673 aa18.09■□□□□ 0.49
LYSMD4-204ENST00000409796 TCEANC2Q96MN5 208 aa18.08■□□□□ 0.49
LYSMD4-204ENST00000409796 TAF6LQ9Y6J9 622 aa18.08■□□□□ 0.49
LYSMD4-204ENST00000409796 RGPD5Q99666 1765 aa18.08■□□□□ 0.48
LYSMD4-204ENST00000409796 KDM4AO75164 1064 aa18.08■□□□□ 0.48
LYSMD4-204ENST00000409796 LARP1BQ659C4 914 aaKnown RBP18.08■□□□□ 0.48
LYSMD4-204ENST00000409796 NPHP4O75161 1426 aaPredicted RBP18.08■□□□□ 0.48
LYSMD4-204ENST00000409796 STRCQ7RTU9 1775 aa18.08■□□□□ 0.48
LYSMD4-204ENST00000409796 PSMA5P28066 241 aa18.07■□□□□ 0.48
LYSMD4-204ENST00000409796 RIC3Q7Z5B4 369 aa18.07■□□□□ 0.48
LYSMD4-204ENST00000409796 C5P01031 1676 aa18.07■□□□□ 0.48
LYSMD4-204ENST00000409796 ADAMTS7Q9UKP4 1686 aa18.07■□□□□ 0.48
LYSMD4-204ENST00000409796 CDC37L1Q7L3B6 337 aa18.07■□□□□ 0.48
LYSMD4-204ENST00000409796 TTC12Q9H892 705 aaPredicted RBP18.07■□□□□ 0.48
LYSMD4-204ENST00000409796 SLC39A6Q13433 755 aa18.06■□□□□ 0.48
LYSMD4-204ENST00000409796 BLOC1S2Q6QNY1 142 aa18.06■□□□□ 0.48
LYSMD4-204ENST00000409796 TTC6Q86TZ1 520 aa18.06■□□□□ 0.48
LYSMD4-204ENST00000409796 FERMT3Q86UX7 667 aa18.06■□□□□ 0.48
LYSMD4-204ENST00000409796 MED23Q9ULK4 1368 aa18.06■□□□□ 0.48
LYSMD4-204ENST00000409796 EPHA10Q5JZY3 1008 aa18.06■□□□□ 0.48
LYSMD4-204ENST00000409796 FAM173BQ6P4H8 233 aa18.06■□□□□ 0.48
LYSMD4-204ENST00000409796 ZNF589Q86UQ0 364 aaPredicted RBP18.06■□□□□ 0.48
LYSMD4-204ENST00000409796 PIBF1Q8WXW3 757 aa18.06■□□□□ 0.48
LYSMD4-204ENST00000409796 NEURL1BA8MQ27 555 aa18.05■□□□□ 0.48
LYSMD4-204ENST00000409796 AP5Z1O43299 807 aa18.05■□□□□ 0.48
LYSMD4-204ENST00000409796 MYL6BP14649 208 aa18.05■□□□□ 0.48
LYSMD4-204ENST00000409796 RPS6KB1P23443 525 aa18.05■□□□□ 0.48
LYSMD4-204ENST00000409796 RNF20Q5VTR2 975 aa18.05■□□□□ 0.48
LYSMD4-204ENST00000409796 LARP1Q6PKG0 1096 aaKnown RBP18.05■□□□□ 0.48
LYSMD4-204ENST00000409796 EDC3Q96F86 508 aaKnown RBP18.05■□□□□ 0.48
LYSMD4-204ENST00000409796 PLCB2Q00722 1185 aa18.05■□□□□ 0.48
LYSMD4-204ENST00000409796 KRT85P78386 507 aa18.04■□□□□ 0.48
LYSMD4-204ENST00000409796 TOB2Q14106 344 aaPredicted RBP18.04■□□□□ 0.48
LYSMD4-204ENST00000409796 KLHL34Q8N239 644 aa18.04■□□□□ 0.48
LYSMD4-204ENST00000409796 MRC1P22897 1456 aa18.04■□□□□ 0.48
LYSMD4-204ENST00000409796 DYNC1I1O14576 645 aa18.04■□□□□ 0.48
LYSMD4-204ENST00000409796 GCKRQ14397 625 aa18.04■□□□□ 0.48
LYSMD4-204ENST00000409796 ZNF790Q6PG37 636 aa18.04■□□□□ 0.48
LYSMD4-204ENST00000409796 C17orf53Q8N3J3 647 aaPredicted RBP18.04■□□□□ 0.48
LYSMD4-204ENST00000409796 XAGE3Q8WTP9 111 aa18.04■□□□□ 0.48
LYSMD4-204ENST00000409796 MYD88Q99836 296 aa18.04■□□□□ 0.48
LYSMD4-204ENST00000409796 JCADQ9P266 1359 aa18.03■□□□□ 0.48
LYSMD4-204ENST00000409796 NEXNQ0ZGT2 675 aa18.03■□□□□ 0.48
LYSMD4-204ENST00000409796 NOLC1Q14978 699 aaKnown RBP eCLIP18.03■□□□□ 0.48
LYSMD4-204ENST00000409796 ANKRD1Q15327 319 aa18.03■□□□□ 0.48
LYSMD4-204ENST00000409796 DNTTIP2Q5QJE6 756 aaKnown RBP18.03■□□□□ 0.48
LYSMD4-204ENST00000409796 CHMP3Q9Y3E7 222 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 570.1 ms