RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 GOLGA8BA8MQT2 603 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 PPP1R12BO60237 982 aaPredicted RBP5.87□□□□□ -1.47
SCN3A-203ENST00000409101 ALDH1L1O75891 902 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 NLRP5P59047 1200 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 PHAXQ9H814 394 aaKnown RBP5.87□□□□□ -1.47
SCN3A-203ENST00000409101 COL17A1Q9UMD9 1497 aaPredicted RBP5.87□□□□□ -1.47
SCN3A-203ENST00000409101 IL16Q14005 1332 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 UGGT1Q9NYU2 1555 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 POTEJP0CG39 1038 aa5.87□□□□□ -1.47
SCN3A-203ENST00000409101 CASTP20810 708 aaKnown RBP5.87□□□□□ -1.47
SCN3A-203ENST00000409101 PRPF40BQ6NWY9 871 aaKnown RBP5.87□□□□□ -1.47
SCN3A-203ENST00000409101 IQSEC3Q9UPP2 1182 aaPredicted RBP5.87□□□□□ -1.47
SCN3A-203ENST00000409101 ME1P48163 572 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 HOMER1Q86YM7 354 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 EYA1Q99502 592 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 SLC4A4Q9Y6R1 1079 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 SBNO1A3KN83 1393 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 MAGI2Q86UL8 1455 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 MAGEB6P1A0A0J9YX57 407 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 CCDC194A0A1B0GVG4 234 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 LDHBP07195 334 aaKnown RBP5.86□□□□□ -1.47
SCN3A-203ENST00000409101 PPM1FP49593 454 aaPredicted RBP5.86□□□□□ -1.47
SCN3A-203ENST00000409101 BRPF1P55201 1214 aaPredicted RBP5.86□□□□□ -1.47
SCN3A-203ENST00000409101 SAMM50Q9Y512 469 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 MAST3O60307 1309 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 PRAG1Q86YV5 1406 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 KDM5DQ9BY66 1539 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 LARP1BQ659C4 914 aaKnown RBP5.86□□□□□ -1.47
SCN3A-203ENST00000409101 SEPT11Q9NVA2 429 aaKnown RBP5.86□□□□□ -1.47
SCN3A-203ENST00000409101 SAMD9Q5K651 1589 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 CHD1O14646 1710 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 MAPKBP1O60336 1514 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 IL15P40933 162 aaPredicted RBP5.86□□□□□ -1.47
SCN3A-203ENST00000409101 SH2D4AQ9H788 454 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 ASXL1Q8IXJ9 1541 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 PLEKHG1Q9ULL1 1385 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 KIF22Q14807 665 aa5.86□□□□□ -1.47
SCN3A-203ENST00000409101 TRIM37O94972 964 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 LMBR1LQ6UX01 489 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 ZNHIT6Q9NWK9 470 aaKnown RBP5.85□□□□□ -1.47
SCN3A-203ENST00000409101 NKTRP30414 1462 aaKnown RBP5.85□□□□□ -1.47
SCN3A-203ENST00000409101 H7C1D1 291 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 SMC2O95347 1197 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 LTKP29376 864 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 C2CD5Q86YS7 1000 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 POLKQ9UBT6 870 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 PTPRKQ15262 1439 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 EDC4Q6P2E9 1401 aaKnown RBP5.85□□□□□ -1.47
SCN3A-203ENST00000409101 GRM8O00222 908 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 RARSP54136 660 aaKnown RBP5.85□□□□□ -1.47
SCN3A-203ENST00000409101 TMEM67Q5HYA8 995 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 TSG101Q99816 390 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 ECHDC1Q9NTX5 307 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 MYO6Q9UM54 1294 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 ZNF335Q9H4Z2 1342 aaPredicted RBP5.85□□□□□ -1.47
SCN3A-203ENST00000409101 ZNF592Q92610 1267 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 MAP3K19Q56UN5 1328 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 EFCAB6Q5THR3 1501 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 A0A1W2PP64 1363 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 CAGE1Q8TC20 777 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 KRT23Q9C075 422 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 DENND2AQ9ULE3 1009 aa5.85□□□□□ -1.47
SCN3A-203ENST00000409101 CKAP2LQ8IYA6 745 aa5.84□□□□□ -1.47
SCN3A-203ENST00000409101 TXLNBQ8N3L3 684 aa5.84□□□□□ -1.47
SCN3A-203ENST00000409101 UBA5Q9GZZ9 404 aa5.84□□□□□ -1.47
SCN3A-203ENST00000409101 SLC52A2Q9HAB3 445 aa5.84□□□□□ -1.47
SCN3A-203ENST00000409101 CFAP43Q8NDM7 1665 aa5.84□□□□□ -1.47
SCN3A-203ENST00000409101 PPIP5K2O43314 1243 aa5.84□□□□□ -1.47
SCN3A-203ENST00000409101 ZFYP08048 801 aaPredicted RBP5.84□□□□□ -1.47
SCN3A-203ENST00000409101 UNC5CLQ8IV45 518 aa5.84□□□□□ -1.47
SCN3A-203ENST00000409101 CERKQ8TCT0 537 aa5.84□□□□□ -1.47
SCN3A-203ENST00000409101 LUC7LQ9NQ29 371 aaKnown RBP5.84□□□□□ -1.47
SCN3A-203ENST00000409101 MYO5CQ9NQX4 1742 aa5.84□□□□□ -1.47
SCN3A-203ENST00000409101 MAP3K9P80192 1104 aa5.84□□□□□ -1.47
SCN3A-203ENST00000409101 SMARCC2Q8TAQ2 1214 aa5.84□□□□□ -1.47
SCN3A-203ENST00000409101 DDX11Q96FC9 970 aa5.84□□□□□ -1.47
SCN3A-203ENST00000409101 NLRP1Q9C000 1473 aa5.84□□□□□ -1.47
SCN3A-203ENST00000409101 TARBP1Q13395 1621 aaKnown RBP5.84□□□□□ -1.47
SCN3A-203ENST00000409101 FIBPO43427 364 aa5.84□□□□□ -1.48
SCN3A-203ENST00000409101 NCOA7Q8NI08 942 aa5.84□□□□□ -1.48
SCN3A-203ENST00000409101 CFAP45Q9UL16 551 aa5.84□□□□□ -1.48
SCN3A-203ENST00000409101 WDR33Q9C0J8 1336 aaKnown RBP5.84□□□□□ -1.48
SCN3A-203ENST00000409101 ERVV-2B6SEH9 535 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 DNMT1P26358 1616 aaKnown RBP5.83□□□□□ -1.48
SCN3A-203ENST00000409101 MPNDQ8N594 471 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 PLBD2Q8NHP8 589 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 DEF6Q9H4E7 631 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 STX8Q9UNK0 236 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.83□□□□□ -1.48
SCN3A-203ENST00000409101 GNAT2P19087 354 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 CCDC82Q8N4S0 544 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 DCPSQ96C86 337 aaKnown RBP5.83□□□□□ -1.48
SCN3A-203ENST00000409101 KRT85P78386 507 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 PRKG1Q13976 671 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 ZNF790Q6PG37 636 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 CNNM2Q9H8M5 875 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 RTN4Q9NQC3 1192 aaKnown RBP5.83□□□□□ -1.48
SCN3A-203ENST00000409101 PDE8AO60658 829 aa5.83□□□□□ -1.48
SCN3A-203ENST00000409101 HIBADHP31937 336 aaKnown RBP5.83□□□□□ -1.48
SCN3A-203ENST00000409101 GPS2Q13227 327 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms