RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 GIGYF2Q6Y7W6 1299 aaKnown RBP12.14□□□□□ -0.47
POLR1A-202ENST00000409024 PPP1R42Q7Z4L9 355 aa12.14□□□□□ -0.47
POLR1A-202ENST00000409024 ACSBG1Q96GR2 724 aa12.14□□□□□ -0.47
POLR1A-202ENST00000409024 ISCA1Q9BUE6 129 aa12.14□□□□□ -0.47
POLR1A-202ENST00000409024 CCDC87Q9NVE4 849 aa12.14□□□□□ -0.47
POLR1A-202ENST00000409024 CWC25Q9NXE8 425 aaPredicted RBP12.14□□□□□ -0.47
POLR1A-202ENST00000409024 RBM19Q9Y4C8 960 aaKnown RBP12.14□□□□□ -0.47
POLR1A-202ENST00000409024 TJP1Q07157 1748 aa12.14□□□□□ -0.47
POLR1A-202ENST00000409024 NHSQ6T4R5 1651 aa12.13□□□□□ -0.47
POLR1A-202ENST00000409024 A0A087WZG4 1122 aa12.13□□□□□ -0.47
POLR1A-202ENST00000409024 H7C1W4 665 aa12.13□□□□□ -0.47
POLR1A-202ENST00000409024 YBX3P16989 372 aaKnown RBP eCLIP12.13□□□□□ -0.47
POLR1A-202ENST00000409024 RC3H1Q5TC82 1133 aaKnown RBP12.13□□□□□ -0.47
POLR1A-202ENST00000409024 TTLL7Q6ZT98 887 aa12.13□□□□□ -0.47
POLR1A-202ENST00000409024 ERC1Q8IUD2 1116 aa12.13□□□□□ -0.47
POLR1A-202ENST00000409024 NLGN2Q8NFZ4 835 aa12.13□□□□□ -0.47
POLR1A-202ENST00000409024 LNPKQ9C0E8 428 aa12.13□□□□□ -0.47
POLR1A-202ENST00000409024 PNMA6EA0A0J9YXQ4 647 aa12.12□□□□□ -0.47
POLR1A-202ENST00000409024 SRGAP3O43295 1099 aa12.12□□□□□ -0.47
POLR1A-202ENST00000409024 CAPN15O75808 1086 aa12.12□□□□□ -0.47
POLR1A-202ENST00000409024 APLP1P51693 650 aa12.12□□□□□ -0.47
POLR1A-202ENST00000409024 EIF5P55010 431 aaKnown RBP12.12□□□□□ -0.47
POLR1A-202ENST00000409024 RABL6Q3YEC7 729 aaPredicted RBP12.12□□□□□ -0.47
POLR1A-202ENST00000409024 BMP2KLQ5H9B9 411 aa12.12□□□□□ -0.47
POLR1A-202ENST00000409024 LRRCC1Q9C099 1032 aa12.12□□□□□ -0.47
POLR1A-202ENST00000409024 OSBPL3Q9H4L5 887 aa12.12□□□□□ -0.47
POLR1A-202ENST00000409024 CNTNAP4Q9C0A0 1308 aa12.11□□□□□ -0.47
POLR1A-202ENST00000409024 CASP7P55210 303 aa12.11□□□□□ -0.47
POLR1A-202ENST00000409024 C8orf34Q49A92 452 aa12.11□□□□□ -0.47
POLR1A-202ENST00000409024 INTS5Q6P9B9 1019 aaKnown RBP12.11□□□□□ -0.47
POLR1A-202ENST00000409024 ZNF526Q8TF50 670 aaPredicted RBP12.11□□□□□ -0.47
POLR1A-202ENST00000409024 KIF1BPQ96EK5 621 aa12.11□□□□□ -0.47
POLR1A-202ENST00000409024 CRKLP46109 303 aaKnown RBP12.1□□□□□ -0.47
POLR1A-202ENST00000409024 PIP4K2AP48426 406 aaPredicted RBP12.1□□□□□ -0.47
POLR1A-202ENST00000409024 ZNF827Q17R98 1081 aa12.1□□□□□ -0.47
POLR1A-202ENST00000409024 SUCLG2Q96I99 432 aa12.1□□□□□ -0.47
POLR1A-202ENST00000409024 ZBTB1Q9Y2K1 713 aa12.1□□□□□ -0.47
POLR1A-202ENST00000409024 AOX1Q06278 1338 aa12.1□□□□□ -0.47
POLR1A-202ENST00000409024 SURF6O75683 361 aaKnown RBP12.09□□□□□ -0.47
POLR1A-202ENST00000409024 PCCAP05165 728 aaPredicted RBP12.09□□□□□ -0.47
POLR1A-202ENST00000409024 HSP90B1P14625 803 aaKnown RBP12.09□□□□□ -0.47
POLR1A-202ENST00000409024 CLEC4GQ6UXB4 293 aa12.09□□□□□ -0.47
POLR1A-202ENST00000409024 SKAP1Q86WV1 359 aa12.09□□□□□ -0.47
POLR1A-202ENST00000409024 DZIP3Q86Y13 1208 aaKnown RBP12.09□□□□□ -0.47
POLR1A-202ENST00000409024 PLEKHM2Q8IWE5 1019 aa12.09□□□□□ -0.47
POLR1A-202ENST00000409024 DNAJC5GQ8N7S2 189 aa12.09□□□□□ -0.47
POLR1A-202ENST00000409024 KAZALD1Q96I82 304 aa12.09□□□□□ -0.47
POLR1A-202ENST00000409024 AK7Q96M32 723 aa12.09□□□□□ -0.47
POLR1A-202ENST00000409024 PLA2G12BQ9BX93 195 aa12.09□□□□□ -0.47
POLR1A-202ENST00000409024 ZBTB3Q9H5J0 574 aa12.09□□□□□ -0.47
POLR1A-202ENST00000409024 BICC1Q9H694 974 aaKnown RBP12.09□□□□□ -0.47
POLR1A-202ENST00000409024 CDHR2Q9BYE9 1310 aa12.09□□□□□ -0.47
POLR1A-202ENST00000409024 ATP5J2-PTCD1G3V325 749 aa12.08□□□□□ -0.48
POLR1A-202ENST00000409024 PRELPP51888 382 aa12.08□□□□□ -0.48
POLR1A-202ENST00000409024 ITPK1Q13572 414 aa12.08□□□□□ -0.48
POLR1A-202ENST00000409024 PARP10Q53GL7 1025 aa12.08□□□□□ -0.48
POLR1A-202ENST00000409024 COL13A1Q5TAT6 717 aaPredicted RBP12.08□□□□□ -0.48
POLR1A-202ENST00000409024 ZBTB38Q8NAP3 1195 aaPredicted RBP12.08□□□□□ -0.48
POLR1A-202ENST00000409024 COPRSQ9NQ92 184 aa12.08□□□□□ -0.48
POLR1A-202ENST00000409024 STAP2Q9UGK3 403 aa12.08□□□□□ -0.48
POLR1A-202ENST00000409024 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
POLR1A-202ENST00000409024 AFDNP55196 1824 aaKnown RBP12.08□□□□□ -0.48
POLR1A-202ENST00000409024 COL5A3P25940 1745 aaPredicted RBP12.08□□□□□ -0.48
POLR1A-202ENST00000409024 G3BP1Q13283 466 aaKnown RBP eCLIP12.07□□□□□ -0.48
POLR1A-202ENST00000409024 UBE3BQ7Z3V4 1068 aa12.07□□□□□ -0.48
POLR1A-202ENST00000409024 RHPN1Q8TCX5 695 aa12.07□□□□□ -0.48
POLR1A-202ENST00000409024 AKT1S1Q96B36 256 aa12.07□□□□□ -0.48
POLR1A-202ENST00000409024 LRRC4BQ9NT99 713 aa12.07□□□□□ -0.48
POLR1A-202ENST00000409024 EXOC6BQ9Y2D4 811 aa12.07□□□□□ -0.48
POLR1A-202ENST00000409024 ZNF652Q9Y2D9 606 aa12.07□□□□□ -0.48
POLR1A-202ENST00000409024 KAT6BQ8WYB5 2073 aa12.07□□□□□ -0.48
POLR1A-202ENST00000409024 BTAF1O14981 1849 aa12.07□□□□□ -0.48
POLR1A-202ENST00000409024 RPS6KA4O75676 772 aa12.06□□□□□ -0.48
POLR1A-202ENST00000409024 SLC27A3Q5K4L6 730 aa12.06□□□□□ -0.48
POLR1A-202ENST00000409024 NLRP10Q86W26 655 aa12.06□□□□□ -0.48
POLR1A-202ENST00000409024 ZNF34Q8IZ26 560 aa12.06□□□□□ -0.48
POLR1A-202ENST00000409024 TNS4Q8IZW8 715 aa12.06□□□□□ -0.48
POLR1A-202ENST00000409024 TFCP2L1Q9NZI6 479 aa12.06□□□□□ -0.48
POLR1A-202ENST00000409024 SALL3Q9BXA9 1300 aa12.06□□□□□ -0.48
POLR1A-202ENST00000409024 KIF3CO14782 793 aa12.05□□□□□ -0.48
POLR1A-202ENST00000409024 PDE1AP54750 535 aa12.05□□□□□ -0.48
POLR1A-202ENST00000409024 FOXO4P98177 505 aa12.05□□□□□ -0.48
POLR1A-202ENST00000409024 TTC22Q5TAA0 569 aa12.05□□□□□ -0.48
POLR1A-202ENST00000409024 CLASRPQ8N2M8 674 aaKnown RBP12.05□□□□□ -0.48
POLR1A-202ENST00000409024 UPF2Q9HAU5 1272 aaKnown RBP12.05□□□□□ -0.48
POLR1A-202ENST00000409024 ZNF330Q9Y3S2 320 aaPredicted RBP12.05□□□□□ -0.48
POLR1A-202ENST00000409024 LY75O60449 1722 aa12.05□□□□□ -0.48
POLR1A-202ENST00000409024 PNPLA7Q6ZV29 1317 aa12.05□□□□□ -0.48
POLR1A-202ENST00000409024 USP42Q9H9J4 1324 aaKnown RBP12.05□□□□□ -0.48
POLR1A-202ENST00000409024 ANKRD36CQ5JPF3 1778 aa12.05□□□□□ -0.48
POLR1A-202ENST00000409024 CAMTA2O94983 1202 aa12.04□□□□□ -0.48
POLR1A-202ENST00000409024 CSF1RP07333 972 aa12.04□□□□□ -0.48
POLR1A-202ENST00000409024 RFX5P48382 616 aaPredicted RBP12.04□□□□□ -0.48
POLR1A-202ENST00000409024 OS9Q13438 667 aaPredicted RBP12.04□□□□□ -0.48
POLR1A-202ENST00000409024 HLFQ16534 295 aa12.04□□□□□ -0.48
POLR1A-202ENST00000409024 LINC00116Q8NCU8 138 aa12.04□□□□□ -0.48
POLR1A-202ENST00000409024 CCNL1Q9UK58 526 aaPredicted RBP12.04□□□□□ -0.48
POLR1A-202ENST00000409024 TTC41PQ6P2S7 1318 aa12.04□□□□□ -0.48
POLR1A-202ENST00000409024 SMARCA5O60264 1052 aaPredicted RBP12.03□□□□□ -0.48
POLR1A-202ENST00000409024 CIAO1O76071 339 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms