RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 FLIIQ13045 1269 aa13.18□□□□□ -0.3
TSPAN9-202ENST00000407263 FKBP5Q13451 457 aaPredicted RBP13.18□□□□□ -0.3
TSPAN9-202ENST00000407263 MYD88Q99836 296 aa13.18□□□□□ -0.3
TSPAN9-202ENST00000407263 CHMP4AQ9BY43 222 aa13.18□□□□□ -0.3
TSPAN9-202ENST00000407263 NYXQ9GZU5 481 aa13.18□□□□□ -0.3
TSPAN9-202ENST00000407263 MAP3K2Q9Y2U5 619 aa13.18□□□□□ -0.3
TSPAN9-202ENST00000407263 RIC1Q4ADV7 1423 aa13.18□□□□□ -0.3
TSPAN9-202ENST00000407263 TCIRG1Q13488 830 aa13.17□□□□□ -0.3
TSPAN9-202ENST00000407263 PARP10Q53GL7 1025 aa13.17□□□□□ -0.3
TSPAN9-202ENST00000407263 TPTE2Q6XPS3 522 aa13.17□□□□□ -0.3
TSPAN9-202ENST00000407263 NLRP10Q86W26 655 aa13.17□□□□□ -0.3
TSPAN9-202ENST00000407263 BRIP1Q9BX63 1249 aa13.17□□□□□ -0.3
TSPAN9-202ENST00000407263 BCL2L13Q9BXK5 485 aa13.17□□□□□ -0.3
TSPAN9-202ENST00000407263 COL4A1P02462 1669 aa13.17□□□□□ -0.3
TSPAN9-202ENST00000407263 DICER1Q9UPY3 1922 aaKnown RBP13.17□□□□□ -0.3
TSPAN9-202ENST00000407263 LRRC37AA6NMS7 1700 aa13.16□□□□□ -0.3
TSPAN9-202ENST00000407263 ZBED9Q6R2W3 1325 aa13.16□□□□□ -0.3
TSPAN9-202ENST00000407263 H0YIN7 160 aa13.16□□□□□ -0.3
TSPAN9-202ENST00000407263 KCNA3P22001 575 aa13.16□□□□□ -0.3
TSPAN9-202ENST00000407263 PDE6BP35913 854 aa13.16□□□□□ -0.3
TSPAN9-202ENST00000407263 PPP1R42Q7Z4L9 355 aa13.16□□□□□ -0.3
TSPAN9-202ENST00000407263 ZNF622Q969S3 477 aaKnown RBP eCLIP13.16□□□□□ -0.3
TSPAN9-202ENST00000407263 UTP14AQ9BVJ6 771 aaKnown RBP13.16□□□□□ -0.3
TSPAN9-202ENST00000407263 GOLGB1Q14789 3259 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-202ENST00000407263 A0A1B0GUL6 1792 aa13.15□□□□□ -0.3
TSPAN9-202ENST00000407263 PI4KAP2A4QPH2 592 aa13.15□□□□□ -0.3
TSPAN9-202ENST00000407263 RTL5Q5HYW3 569 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-202ENST00000407263 TRMT2AQ8IZ69 625 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-202ENST00000407263 PI4KAP1Q8N8J0 262 aa13.15□□□□□ -0.3
TSPAN9-202ENST00000407263 ISCA1Q9BUE6 129 aa13.15□□□□□ -0.3
TSPAN9-202ENST00000407263 PIM2Q9P1W9 311 aa13.15□□□□□ -0.3
TSPAN9-202ENST00000407263 DALRD3Q5D0E6 543 aaKnown RBP13.14□□□□□ -0.31
TSPAN9-202ENST00000407263 KSR2Q6VAB6 950 aa13.14□□□□□ -0.31
TSPAN9-202ENST00000407263 C3orf67Q6ZVT6 689 aa13.14□□□□□ -0.31
TSPAN9-202ENST00000407263 SYNE4Q8N205 404 aa13.14□□□□□ -0.31
TSPAN9-202ENST00000407263 METTL22Q9BUU2 404 aaPredicted RBP13.14□□□□□ -0.31
TSPAN9-202ENST00000407263 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
TSPAN9-202ENST00000407263 TRMT112Q9UI30 125 aaKnown RBP13.14□□□□□ -0.31
TSPAN9-202ENST00000407263 SH3TC1Q8TE82 1336 aa13.13□□□□□ -0.31
TSPAN9-202ENST00000407263 F6X3S4 739 aa13.13□□□□□ -0.31
TSPAN9-202ENST00000407263 HCLS1P14317 486 aaPredicted RBP13.13□□□□□ -0.31
TSPAN9-202ENST00000407263 SSH1Q8WYL5 1049 aa13.13□□□□□ -0.31
TSPAN9-202ENST00000407263 SMC4Q9NTJ3 1288 aa13.13□□□□□ -0.31
TSPAN9-202ENST00000407263 RNF123Q5XPI4 1314 aa13.13□□□□□ -0.31
TSPAN9-202ENST00000407263 SRGNP10124 158 aa13.12□□□□□ -0.31
TSPAN9-202ENST00000407263 NEXNQ0ZGT2 675 aa13.12□□□□□ -0.31
TSPAN9-202ENST00000407263 CWF19L2Q2TBE0 894 aaKnown RBP13.12□□□□□ -0.31
TSPAN9-202ENST00000407263 MRPL50Q8N5N7 158 aaKnown RBP13.12□□□□□ -0.31
TSPAN9-202ENST00000407263 DNAAF4Q8WXU2 420 aa13.12□□□□□ -0.31
TSPAN9-202ENST00000407263 JARID2Q92833 1246 aaPredicted RBP13.12□□□□□ -0.31
TSPAN9-202ENST00000407263 FAM89AQ96GI7 184 aa13.12□□□□□ -0.31
TSPAN9-202ENST00000407263 GRIN3BO60391 1043 aa13.11□□□□□ -0.31
TSPAN9-202ENST00000407263 IGKV5-2P06315 115 aa13.11□□□□□ -0.31
TSPAN9-202ENST00000407263 STYK1Q6J9G0 422 aa13.11□□□□□ -0.31
TSPAN9-202ENST00000407263 PRPF40BQ6NWY9 871 aaKnown RBP13.11□□□□□ -0.31
TSPAN9-202ENST00000407263 TTLL6Q8N841 843 aa13.11□□□□□ -0.31
TSPAN9-202ENST00000407263 RPGRQ92834 1020 aaKnown RBP13.11□□□□□ -0.31
TSPAN9-202ENST00000407263 MASTLQ96GX5 879 aa13.11□□□□□ -0.31
TSPAN9-202ENST00000407263 CWC25Q9NXE8 425 aaPredicted RBP13.11□□□□□ -0.31
TSPAN9-202ENST00000407263 NEURL1BA8MQ27 555 aa13.1□□□□□ -0.31
TSPAN9-202ENST00000407263 NPR1P16066 1061 aa13.1□□□□□ -0.31
TSPAN9-202ENST00000407263 RASSF7Q02833 373 aa13.1□□□□□ -0.31
TSPAN9-202ENST00000407263 SLC4A10Q6U841 1118 aa13.1□□□□□ -0.31
TSPAN9-202ENST00000407263 SLC51AQ86UW1 340 aa13.1□□□□□ -0.31
TSPAN9-202ENST00000407263 CCDC191Q8NCU4 936 aa13.1□□□□□ -0.31
TSPAN9-202ENST00000407263 YTHDC1Q96MU7 727 aaKnown RBP13.1□□□□□ -0.31
TSPAN9-202ENST00000407263 PDZRN3Q9UPQ7 1066 aa13.1□□□□□ -0.31
TSPAN9-202ENST00000407263 IRS4O14654 1257 aaPredicted RBP13.09□□□□□ -0.31
TSPAN9-202ENST00000407263 LTBP1Q14766 1721 aa13.09□□□□□ -0.31
TSPAN9-202ENST00000407263 ALDH1L2Q3SY69 923 aa13.09□□□□□ -0.31
TSPAN9-202ENST00000407263 CRY2Q49AN0 593 aa13.09□□□□□ -0.31
TSPAN9-202ENST00000407263 ARHGAP27Q6ZUM4 889 aa13.09□□□□□ -0.31
TSPAN9-202ENST00000407263 CNKSR1Q969H4 720 aa13.09□□□□□ -0.31
TSPAN9-202ENST00000407263 KLRG2A4D1S0 409 aaPredicted RBP13.08□□□□□ -0.32
TSPAN9-202ENST00000407263 C21orf2O43822 256 aa13.08□□□□□ -0.32
TSPAN9-202ENST00000407263 CT47B1P0C2W7 299 aaPredicted RBP13.08□□□□□ -0.32
TSPAN9-202ENST00000407263 OLFM4Q6UX06 510 aa13.08□□□□□ -0.32
TSPAN9-202ENST00000407263 ZBTB38Q8NAP3 1195 aaPredicted RBP13.08□□□□□ -0.32
TSPAN9-202ENST00000407263 NLRP3Q96P20 1036 aa13.08□□□□□ -0.32
TSPAN9-202ENST00000407263 UTRNP46939 3433 aa13.08□□□□□ -0.32
TSPAN9-202ENST00000407263 ABCC4O15439 1325 aa13.08□□□□□ -0.32
TSPAN9-202ENST00000407263 PCCAP05165 728 aaPredicted RBP13.07□□□□□ -0.32
TSPAN9-202ENST00000407263 YY1P25490 414 aa13.07□□□□□ -0.32
TSPAN9-202ENST00000407263 TRIM28Q13263 835 aaKnown RBP13.07□□□□□ -0.32
TSPAN9-202ENST00000407263 SLC10A5Q5PT55 438 aa13.07□□□□□ -0.32
TSPAN9-202ENST00000407263 UBE3BQ7Z3V4 1068 aa13.07□□□□□ -0.32
TSPAN9-202ENST00000407263 CCDC85AQ96PX6 553 aaPredicted RBP13.07□□□□□ -0.32
TSPAN9-202ENST00000407263 PTPRCP08575 1304 aa13.07□□□□□ -0.32
TSPAN9-202ENST00000407263 DUOX1Q9NRD9 1551 aa13.07□□□□□ -0.32
TSPAN9-202ENST00000407263 PPEF1O14829 653 aaPredicted RBP13.06□□□□□ -0.32
TSPAN9-202ENST00000407263 RARSP54136 660 aaKnown RBP13.06□□□□□ -0.32
TSPAN9-202ENST00000407263 GCKRQ14397 625 aa13.06□□□□□ -0.32
TSPAN9-202ENST00000407263 LINS1Q8NG48 757 aa13.06□□□□□ -0.32
TSPAN9-202ENST00000407263 RBM17Q96I25 401 aaKnown RBP13.06□□□□□ -0.32
TSPAN9-202ENST00000407263 CDHR2Q9BYE9 1310 aa13.06□□□□□ -0.32
TSPAN9-202ENST00000407263 SNED1Q8TER0 1413 aa13.05□□□□□ -0.32
TSPAN9-202ENST00000407263 NFKBIEO00221 500 aa13.05□□□□□ -0.32
TSPAN9-202ENST00000407263 BEND3Q5T5X7 828 aa13.05□□□□□ -0.32
TSPAN9-202ENST00000407263 KIF16BQ96L93 1317 aa13.05□□□□□ -0.32
TSPAN9-202ENST00000407263 BCAR3O75815 825 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms