RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.01■■■□□ 2.39
DNMT3A-206ENST00000406659 TCIRG1Q13488 830 aa30■■■□□ 2.39
DNMT3A-206ENST00000406659 EPB41L2O43491 1005 aaKnown RBP30■■■□□ 2.39
DNMT3A-206ENST00000406659 ST18O60284 1047 aa30■■■□□ 2.39
DNMT3A-206ENST00000406659 ISCA1Q9BUE6 129 aa30■■■□□ 2.39
DNMT3A-206ENST00000406659 CHMP3Q9Y3E7 222 aa30■■■□□ 2.39
DNMT3A-206ENST00000406659 CCDC9Q9Y3X0 531 aaKnown RBP29.98■■■□□ 2.39
DNMT3A-206ENST00000406659 SPATA31A5Q5VU36 1347 aa29.98■■■□□ 2.39
DNMT3A-206ENST00000406659 SPATA31A7Q8IWB4 1347 aa29.98■■■□□ 2.39
DNMT3A-206ENST00000406659 EVI5LQ96CN4 794 aa29.98■■■□□ 2.39
DNMT3A-206ENST00000406659 ARXQ96QS3 562 aa29.98■■■□□ 2.39
DNMT3A-206ENST00000406659 SGSM2O43147 1006 aa29.97■■■□□ 2.39
DNMT3A-206ENST00000406659 CYP19A1P11511 503 aaPredicted RBP29.97■■■□□ 2.39
DNMT3A-206ENST00000406659 TJP1Q07157 1748 aa29.97■■■□□ 2.39
DNMT3A-206ENST00000406659 SLC4A9Q96Q91 983 aa29.96■■■□□ 2.39
DNMT3A-206ENST00000406659 DIAPH3Q9NSV4 1193 aa29.96■■■□□ 2.39
DNMT3A-206ENST00000406659 TLR7Q9NYK1 1049 aaKnown RBP29.96■■■□□ 2.39
DNMT3A-206ENST00000406659 DDIT3P35638 169 aa29.95■■■□□ 2.39
DNMT3A-206ENST00000406659 ANAPC15P60006 121 aa29.95■■■□□ 2.39
DNMT3A-206ENST00000406659 TFCP2Q12800 502 aa29.95■■■□□ 2.39
DNMT3A-206ENST00000406659 TRIM28Q13263 835 aaKnown RBP29.95■■■□□ 2.39
DNMT3A-206ENST00000406659 RUFY2Q8WXA3 655 aa29.95■■■□□ 2.39
DNMT3A-206ENST00000406659 CIZ1Q9ULV3 898 aaPredicted RBP29.95■■■□□ 2.39
DNMT3A-206ENST00000406659 MAP3K15Q6ZN16 1313 aa29.94■■■□□ 2.38
DNMT3A-206ENST00000406659 DOT1LQ8TEK3 1739 aa29.93■■■□□ 2.38
DNMT3A-206ENST00000406659 UBAP1LF5GYI3 381 aa29.93■■■□□ 2.38
DNMT3A-206ENST00000406659 DEKP35659 375 aaKnown RBP29.93■■■□□ 2.38
DNMT3A-206ENST00000406659 TNNI3KQ59H18 835 aa29.93■■■□□ 2.38
DNMT3A-206ENST00000406659 CWC27Q6UX04 472 aaKnown RBP29.93■■■□□ 2.38
DNMT3A-206ENST00000406659 KIAA1211Q6ZU35 1233 aa29.93■■■□□ 2.38
DNMT3A-206ENST00000406659 IL25Q9H293 177 aa29.93■■■□□ 2.38
DNMT3A-206ENST00000406659 FPGT-TNNI3KV9GXZ4 949 aa29.93■■■□□ 2.38
DNMT3A-206ENST00000406659 NWD2Q9ULI1 1742 aa29.93■■■□□ 2.38
DNMT3A-206ENST00000406659 FOXD4L1Q9NU39 408 aa29.92■■■□□ 2.38
DNMT3A-206ENST00000406659 A0A0G2JS52 829 aa29.92■■■□□ 2.38
DNMT3A-206ENST00000406659 BARGINQ6ZT62 677 aa29.92■■■□□ 2.38
DNMT3A-206ENST00000406659 SLIT2O94813 1529 aa29.91■■■□□ 2.38
DNMT3A-206ENST00000406659 GIGYF2Q6Y7W6 1299 aaKnown RBP29.9■■■□□ 2.38
DNMT3A-206ENST00000406659 BOLA2Q9H3K6 86 aa29.9■■■□□ 2.38
DNMT3A-206ENST00000406659 HIP1O00291 1037 aa29.9■■■□□ 2.38
DNMT3A-206ENST00000406659 MARCH10Q8NA82 808 aaPredicted RBP29.9■■■□□ 2.38
DNMT3A-206ENST00000406659 PALD1Q9ULE6 856 aa29.9■■■□□ 2.38
DNMT3A-206ENST00000406659 PCCAP05165 728 aaPredicted RBP29.89■■■□□ 2.38
DNMT3A-206ENST00000406659 NEK4P51957 841 aa29.89■■■□□ 2.38
DNMT3A-206ENST00000406659 HSP90AB3PQ58FF7 597 aa29.89■■■□□ 2.38
DNMT3A-206ENST00000406659 IL17RAQ96F46 866 aa29.88■■■□□ 2.37
DNMT3A-206ENST00000406659 ACSBG1Q96GR2 724 aa29.88■■■□□ 2.37
DNMT3A-206ENST00000406659 ZBTB1Q9Y2K1 713 aa29.88■■■□□ 2.37
DNMT3A-206ENST00000406659 HSPA4P34932 840 aa29.87■■■□□ 2.37
DNMT3A-206ENST00000406659 LSG1Q9H089 658 aaKnown RBP29.87■■■□□ 2.37
DNMT3A-206ENST00000406659 RAD50Q92878 1312 aa29.87■■■□□ 2.37
DNMT3A-206ENST00000406659 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.87■■■□□ 2.37
DNMT3A-206ENST00000406659 AEBP2Q6ZN18 517 aaPredicted RBP29.87■■■□□ 2.37
DNMT3A-206ENST00000406659 DBNLQ9UJU6 430 aaKnown RBP29.87■■■□□ 2.37
DNMT3A-206ENST00000406659 ATP5JP18859 108 aa29.86■■■□□ 2.37
DNMT3A-206ENST00000406659 ZBTB38Q8NAP3 1195 aaPredicted RBP29.86■■■□□ 2.37
DNMT3A-206ENST00000406659 IL6STP40189 918 aaPredicted RBP29.85■■■□□ 2.37
DNMT3A-206ENST00000406659 IL15P40933 162 aaPredicted RBP29.85■■■□□ 2.37
DNMT3A-206ENST00000406659 HLFQ16534 295 aa29.85■■■□□ 2.37
DNMT3A-206ENST00000406659 ATG9AQ7Z3C6 839 aa29.85■■■□□ 2.37
DNMT3A-206ENST00000406659 MCM2P49736 904 aa29.85■■■□□ 2.37
DNMT3A-206ENST00000406659 FAM89AQ96GI7 184 aa29.84■■■□□ 2.37
DNMT3A-206ENST00000406659 FSD1Q9BTV5 496 aa29.84■■■□□ 2.37
DNMT3A-206ENST00000406659 EYA2O00167 538 aa29.83■■■□□ 2.37
DNMT3A-206ENST00000406659 CCDC57Q2TAC2 916 aa29.83■■■□□ 2.37
DNMT3A-206ENST00000406659 PLA2G12BQ9BX93 195 aa29.83■■■□□ 2.37
DNMT3A-206ENST00000406659 GPR108Q9NPR9 543 aa29.83■■■□□ 2.37
DNMT3A-206ENST00000406659 CIAO1O76071 339 aa29.82■■■□□ 2.36
DNMT3A-206ENST00000406659 DBNDD2Q9BQY9 259 aa29.82■■■□□ 2.36
DNMT3A-206ENST00000406659 ERVV-1B6SEH8 477 aa29.82■■■□□ 2.36
DNMT3A-206ENST00000406659 GPTP24298 496 aa29.82■■■□□ 2.36
DNMT3A-206ENST00000406659 MCM4P33991 863 aa29.82■■■□□ 2.36
DNMT3A-206ENST00000406659 NLRP10Q86W26 655 aa29.82■■■□□ 2.36
DNMT3A-206ENST00000406659 DZIP3Q86Y13 1208 aaKnown RBP29.82■■■□□ 2.36
DNMT3A-206ENST00000406659 IL27Q8NEV9 243 aa29.82■■■□□ 2.36
DNMT3A-206ENST00000406659 NGLY1Q96IV0 654 aa29.82■■■□□ 2.36
DNMT3A-206ENST00000406659 ZNF594Q96JF6 807 aaPredicted RBP29.82■■■□□ 2.36
DNMT3A-206ENST00000406659 ATP6V1AP38606 617 aa29.8■■■□□ 2.36
DNMT3A-206ENST00000406659 RAB3GAP1Q15042 981 aa29.8■■■□□ 2.36
DNMT3A-206ENST00000406659 C8orf37Q96NL8 207 aa29.8■■■□□ 2.36
DNMT3A-206ENST00000406659 JCADQ9P266 1359 aa29.8■■■□□ 2.36
DNMT3A-206ENST00000406659 NMIQ13287 307 aaPredicted RBP29.8■■■□□ 2.36
DNMT3A-206ENST00000406659 LRRC24Q50LG9 513 aa29.8■■■□□ 2.36
DNMT3A-206ENST00000406659 CDHR2Q9BYE9 1310 aa29.79■■■□□ 2.36
DNMT3A-206ENST00000406659 NEUROD6Q96NK8 337 aa29.79■■■□□ 2.36
DNMT3A-206ENST00000406659 CCDC87Q9NVE4 849 aa29.79■■■□□ 2.36
DNMT3A-206ENST00000406659 TBC1D2BQ9UPU7 963 aa29.79■■■□□ 2.36
DNMT3A-206ENST00000406659 CWC22Q9HCG8 908 aaKnown RBP29.78■■■□□ 2.36
DNMT3A-206ENST00000406659 SNX14Q9Y5W7 946 aa29.78■■■□□ 2.36
DNMT3A-206ENST00000406659 LOC102724428A0A0B4J2F2 783 aa29.77■■■□□ 2.36
DNMT3A-206ENST00000406659 CSF1RP07333 972 aa29.77■■■□□ 2.36
DNMT3A-206ENST00000406659 SIK1P57059 783 aa29.77■■■□□ 2.36
DNMT3A-206ENST00000406659 FAM98CQ17RN3 349 aaKnown RBP29.77■■■□□ 2.36
DNMT3A-206ENST00000406659 FAM227BQ96M60 508 aa29.77■■■□□ 2.36
DNMT3A-206ENST00000406659 FBXO3Q9UK99 471 aa29.77■■■□□ 2.36
DNMT3A-206ENST00000406659 PTH1RQ03431 593 aa29.77■■■□□ 2.36
DNMT3A-206ENST00000406659 VPS72Q15906 364 aa29.77■■■□□ 2.36
DNMT3A-206ENST00000406659 TAF7LQ5H9L4 462 aa29.77■■■□□ 2.36
DNMT3A-206ENST00000406659 SMARCC1Q92922 1105 aaPredicted RBP29.77■■■□□ 2.36
DNMT3A-206ENST00000406659 TNPO1Q92973 898 aaKnown RBP29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms