RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ST5P78524 1137 aa13.81□□□□□ -0.2
SMCR8-201ENST00000406438 LRSAM1Q6UWE0 723 aa13.81□□□□□ -0.2
SMCR8-201ENST00000406438 CCDC144CPQ8IYA2 1237 aa13.81□□□□□ -0.2
SMCR8-201ENST00000406438 MAP3K9P80192 1104 aa13.81□□□□□ -0.2
SMCR8-201ENST00000406438 DDX19AQ9NUU7 478 aaKnown RBP13.81□□□□□ -0.2
SMCR8-201ENST00000406438 WDR70Q9NW82 654 aa13.81□□□□□ -0.2
SMCR8-201ENST00000406438 CEP112Q8N8E3 955 aa13.81□□□□□ -0.2
SMCR8-201ENST00000406438 PUS7Q96PZ0 661 aaKnown RBP13.81□□□□□ -0.2
SMCR8-201ENST00000406438 RMND1Q9NWS8 449 aa13.81□□□□□ -0.2
SMCR8-201ENST00000406438 TROQ12816 1431 aaPredicted RBP13.81□□□□□ -0.2
SMCR8-201ENST00000406438 GSTO1P78417 241 aa13.8□□□□□ -0.2
SMCR8-201ENST00000406438 KIAA0753Q2KHM9 967 aa13.8□□□□□ -0.2
SMCR8-201ENST00000406438 CCDC155Q8N6L0 562 aa13.8□□□□□ -0.2
SMCR8-201ENST00000406438 CALCOCO1Q9P1Z2 691 aa13.8□□□□□ -0.2
SMCR8-201ENST00000406438 DBF4Q9UBU7 674 aaPredicted RBP13.8□□□□□ -0.2
SMCR8-201ENST00000406438 METAP2P50579 478 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMCR8-201ENST00000406438 CPLX3Q8WVH0 158 aa13.8□□□□□ -0.2
SMCR8-201ENST00000406438 C16orf45Q96MC5 204 aaPredicted RBP13.8□□□□□ -0.2
SMCR8-201ENST00000406438 VAT1LQ9HCJ6 419 aa13.8□□□□□ -0.2
SMCR8-201ENST00000406438 CWC25Q9NXE8 425 aaPredicted RBP13.8□□□□□ -0.2
SMCR8-201ENST00000406438 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
SMCR8-201ENST00000406438 MAATS1Q7Z4T9 603 aa13.8□□□□□ -0.2
SMCR8-201ENST00000406438 ZNF354CQ86Y25 554 aa13.8□□□□□ -0.2
SMCR8-201ENST00000406438 CKAP2LQ8IYA6 745 aa13.8□□□□□ -0.2
SMCR8-201ENST00000406438 ERMNQ8TAM6 284 aa13.8□□□□□ -0.2
SMCR8-201ENST00000406438 RAB3IL1Q8TBN0 382 aa13.8□□□□□ -0.2
SMCR8-201ENST00000406438 TBCAO75347 108 aaKnown RBP13.8□□□□□ -0.2
SMCR8-201ENST00000406438 TMC6Q7Z403 805 aa13.8□□□□□ -0.2
SMCR8-201ENST00000406438 POLR3GO15318 223 aaPredicted RBP13.8□□□□□ -0.2
SMCR8-201ENST00000406438 HSF2BPO75031 334 aa13.8□□□□□ -0.2
SMCR8-201ENST00000406438 SLFN5Q08AF3 891 aa13.8□□□□□ -0.2
SMCR8-201ENST00000406438 SELENOOQ9BVL4 669 aa13.8□□□□□ -0.2
SMCR8-201ENST00000406438 TRMT1Q9NXH9 659 aaKnown RBP13.8□□□□□ -0.2
SMCR8-201ENST00000406438 LDHCP07864 332 aa13.8□□□□□ -0.2
SMCR8-201ENST00000406438 PPP4R3BQ5MIZ7 849 aa13.8□□□□□ -0.2
SMCR8-201ENST00000406438 PCF11O94913 1555 aaKnown RBP13.8□□□□□ -0.2
SMCR8-201ENST00000406438 ZWINTO95229 277 aa13.79□□□□□ -0.2
SMCR8-201ENST00000406438 ARL1P40616 181 aaPredicted RBP13.79□□□□□ -0.2
SMCR8-201ENST00000406438 CKAP4Q07065 602 aaKnown RBP13.79□□□□□ -0.2
SMCR8-201ENST00000406438 GOLIM4O00461 696 aa13.79□□□□□ -0.2
SMCR8-201ENST00000406438 CAVIN2O95810 425 aa13.79□□□□□ -0.2
SMCR8-201ENST00000406438 PPP1R42Q7Z4L9 355 aa13.79□□□□□ -0.2
SMCR8-201ENST00000406438 SMARCC1Q92922 1105 aaPredicted RBP13.79□□□□□ -0.2
SMCR8-201ENST00000406438 TEX13AQ9BXU3 409 aaPredicted RBP13.79□□□□□ -0.2
SMCR8-201ENST00000406438 TMX1Q9H3N1 280 aa13.79□□□□□ -0.2
SMCR8-201ENST00000406438 CCDC8Q9H0W5 538 aaPredicted RBP13.79□□□□□ -0.2
SMCR8-201ENST00000406438 IARSP41252 1262 aaKnown RBP13.79□□□□□ -0.2
SMCR8-201ENST00000406438 TRMT1LQ7Z2T5 733 aaKnown RBP13.79□□□□□ -0.2
SMCR8-201ENST00000406438 ZGPATQ8N5A5 531 aaKnown RBP13.79□□□□□ -0.2
SMCR8-201ENST00000406438 HMG20BQ9P0W2 317 aa13.79□□□□□ -0.2
SMCR8-201ENST00000406438 ADAMTS2O95450 1211 aa13.78□□□□□ -0.2
SMCR8-201ENST00000406438 DNAAF4Q8WXU2 420 aa13.78□□□□□ -0.2
SMCR8-201ENST00000406438 IDEP14735 1019 aa13.78□□□□□ -0.2
SMCR8-201ENST00000406438 SNW1Q13573 536 aaKnown RBP13.78□□□□□ -0.2
SMCR8-201ENST00000406438 RGS22Q8NE09 1264 aa13.78□□□□□ -0.2
SMCR8-201ENST00000406438 UBE2Q2Q8WVN8 375 aa13.78□□□□□ -0.2
SMCR8-201ENST00000406438 IQCGQ9H095 443 aaKnown RBP13.78□□□□□ -0.2
SMCR8-201ENST00000406438 RFC4P35249 363 aa13.78□□□□□ -0.2
SMCR8-201ENST00000406438 CRNKL1Q9BZJ0 848 aaKnown RBP13.78□□□□□ -0.2
SMCR8-201ENST00000406438 DNMBPQ6XZF7 1577 aa13.78□□□□□ -0.2
SMCR8-201ENST00000406438 RASAL2Q9UJF2 1139 aa13.78□□□□□ -0.2
SMCR8-201ENST00000406438 MAP3K2Q9Y2U5 619 aa13.78□□□□□ -0.2
SMCR8-201ENST00000406438 STAT6P42226 847 aa13.78□□□□□ -0.2
SMCR8-201ENST00000406438 MICU3Q86XE3 530 aa13.78□□□□□ -0.2
SMCR8-201ENST00000406438 CTAGE1Q96RT6 745 aa13.78□□□□□ -0.2
SMCR8-201ENST00000406438 ZSCAN16Q9H4T2 348 aaPredicted RBP13.77□□□□□ -0.2
SMCR8-201ENST00000406438 NCOA7Q8NI08 942 aa13.77□□□□□ -0.2
SMCR8-201ENST00000406438 SNAPC4Q5SXM2 1469 aa13.77□□□□□ -0.2
SMCR8-201ENST00000406438 TRAF1Q13077 416 aa13.77□□□□□ -0.2
SMCR8-201ENST00000406438 GJB2P29033 226 aa13.77□□□□□ -0.21
SMCR8-201ENST00000406438 NCBP1Q09161 790 aaKnown RBP13.77□□□□□ -0.21
SMCR8-201ENST00000406438 IL27Q8NEV9 243 aa13.77□□□□□ -0.21
SMCR8-201ENST00000406438 NGLY1Q96IV0 654 aa13.77□□□□□ -0.21
SMCR8-201ENST00000406438 TSPY3P0CV98 308 aa13.77□□□□□ -0.21
SMCR8-201ENST00000406438 TSPY8P0CW00 308 aa13.77□□□□□ -0.21
SMCR8-201ENST00000406438 UBE2HP62256 183 aa13.77□□□□□ -0.21
SMCR8-201ENST00000406438 MMRN2Q9H8L6 949 aa13.77□□□□□ -0.21
SMCR8-201ENST00000406438 EXOC5O00471 708 aa13.77□□□□□ -0.21
SMCR8-201ENST00000406438 NBPF7P0C2Y1 421 aaPredicted RBP13.77□□□□□ -0.21
SMCR8-201ENST00000406438 MCM5P33992 734 aa13.77□□□□□ -0.21
SMCR8-201ENST00000406438 PRPHP41219 470 aa13.77□□□□□ -0.21
SMCR8-201ENST00000406438 IFIT1BQ5T764 474 aaKnown RBP13.77□□□□□ -0.21
SMCR8-201ENST00000406438 NAIPQ13075 1403 aa13.77□□□□□ -0.21
SMCR8-201ENST00000406438 CBX1P83916 185 aa13.76□□□□□ -0.21
SMCR8-201ENST00000406438 BIN1O00499 593 aa13.76□□□□□ -0.21
SMCR8-201ENST00000406438 SLC26A6Q9BXS9 759 aa13.76□□□□□ -0.21
SMCR8-201ENST00000406438 CCDC102BQ68D86 513 aa13.76□□□□□ -0.21
SMCR8-201ENST00000406438 ANKS4BQ8N8V4 417 aa13.76□□□□□ -0.21
SMCR8-201ENST00000406438 VTI1AQ96AJ9 217 aa13.76□□□□□ -0.21
SMCR8-201ENST00000406438 GPTP24298 496 aa13.76□□□□□ -0.21
SMCR8-201ENST00000406438 TRIM47Q96LD4 638 aa13.76□□□□□ -0.21
SMCR8-201ENST00000406438 PAXBP1Q9Y5B6 917 aa13.76□□□□□ -0.21
SMCR8-201ENST00000406438 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.76□□□□□ -0.21
SMCR8-201ENST00000406438 PHACTR2O75167 634 aa13.76□□□□□ -0.21
SMCR8-201ENST00000406438 BMS1Q14692 1282 aaKnown RBP13.76□□□□□ -0.21
SMCR8-201ENST00000406438 TTC21BQ7Z4L5 1316 aa13.76□□□□□ -0.21
SMCR8-201ENST00000406438 RAPGEF3O95398 923 aa13.75□□□□□ -0.21
SMCR8-201ENST00000406438 SLC4A8Q2Y0W8 1093 aa13.75□□□□□ -0.21
SMCR8-201ENST00000406438 LDHAL6AQ6ZMR3 332 aa13.75□□□□□ -0.21
SMCR8-201ENST00000406438 TTC16Q8NEE8 873 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms