RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 ZHX1Q9UKY1 873 aaPredicted RBP15.38■□□□□ 0.05
SNED1-205ENST00000405547 GCC2Q8IWJ2 1684 aa15.38■□□□□ 0.05
SNED1-205ENST00000405547 POTEJP0CG39 1038 aa15.38■□□□□ 0.05
SNED1-205ENST00000405547 DNMT1P26358 1616 aaKnown RBP15.38■□□□□ 0.05
SNED1-205ENST00000405547 PTPRKQ15262 1439 aa15.38■□□□□ 0.05
SNED1-205ENST00000405547 DESP17661 470 aa15.38■□□□□ 0.05
SNED1-205ENST00000405547 PIBF1Q8WXW3 757 aa15.38■□□□□ 0.05
SNED1-205ENST00000405547 ZNF76P36508 570 aa15.37■□□□□ 0.05
SNED1-205ENST00000405547 AMPD3Q01432 767 aa15.37■□□□□ 0.05
SNED1-205ENST00000405547 GOLGA8AA7E2F4 631 aa15.37■□□□□ 0.05
SNED1-205ENST00000405547 TMEM266Q2M3C6 531 aa15.37■□□□□ 0.05
SNED1-205ENST00000405547 CTAGE1Q96RT6 745 aa15.37■□□□□ 0.05
SNED1-205ENST00000405547 CD109Q6YHK3 1445 aa15.37■□□□□ 0.05
SNED1-205ENST00000405547 RHPN1Q8TCX5 695 aa15.37■□□□□ 0.05
SNED1-205ENST00000405547 SETD1BQ9UPS6 1966 aaKnown RBP15.37■□□□□ 0.05
SNED1-205ENST00000405547 NCOA7Q8NI08 942 aa15.37■□□□□ 0.05
SNED1-205ENST00000405547 MKNK2Q9HBH9 465 aa15.37■□□□□ 0.05
SNED1-205ENST00000405547 CCDC85AQ96PX6 553 aaPredicted RBP15.37■□□□□ 0.05
SNED1-205ENST00000405547 GCOM1H8Y6P7 765 aaPredicted RBP15.37■□□□□ 0.05
SNED1-205ENST00000405547 MYZAPP0CAP1 466 aa15.37■□□□□ 0.05
SNED1-205ENST00000405547 TSHZ3Q63HK5 1081 aa15.37■□□□□ 0.05
SNED1-205ENST00000405547 PI4KAP2A4QPH2 592 aa15.36■□□□□ 0.05
SNED1-205ENST00000405547 PI4KAP1Q8N8J0 262 aa15.36■□□□□ 0.05
SNED1-205ENST00000405547 MEIS3Q99687 375 aa15.36■□□□□ 0.05
SNED1-205ENST00000405547 TAOK3Q9H2K8 898 aa15.36■□□□□ 0.05
SNED1-205ENST00000405547 FBXO3Q9UK99 471 aa15.36■□□□□ 0.05
SNED1-205ENST00000405547 F13A1P00488 732 aa15.36■□□□□ 0.05
SNED1-205ENST00000405547 POLR3DP05423 398 aaPredicted RBP15.36■□□□□ 0.05
SNED1-205ENST00000405547 SLC5A1P13866 664 aa15.36■□□□□ 0.05
SNED1-205ENST00000405547 LMAN1P49257 510 aa15.36■□□□□ 0.05
SNED1-205ENST00000405547 CCDC91Q7Z6B0 441 aa15.36■□□□□ 0.05
SNED1-205ENST00000405547 CCDC12Q8WUD4 166 aaPredicted RBP15.36■□□□□ 0.05
SNED1-205ENST00000405547 KDM5AP29375 1690 aaKnown RBP15.36■□□□□ 0.05
SNED1-205ENST00000405547 IVLP07476 585 aa15.36■□□□□ 0.05
SNED1-205ENST00000405547 GOLIM4O00461 696 aa15.36■□□□□ 0.05
SNED1-205ENST00000405547 METAP2P50579 478 aaKnown RBP eCLIP15.36■□□□□ 0.05
SNED1-205ENST00000405547 GTPBP4Q9BZE4 634 aaKnown RBP15.36■□□□□ 0.05
SNED1-205ENST00000405547 CPLX3Q8WVH0 158 aa15.35■□□□□ 0.05
SNED1-205ENST00000405547 TCP11L1Q9NUJ3 509 aa15.35■□□□□ 0.05
SNED1-205ENST00000405547 TCOF1Q13428 1488 aaKnown RBP15.35■□□□□ 0.05
SNED1-205ENST00000405547 TMEM67Q5HYA8 995 aa15.35■□□□□ 0.05
SNED1-205ENST00000405547 FANCAO15360 1455 aa15.35■□□□□ 0.05
SNED1-205ENST00000405547 CCDC194A0A1B0GVG4 234 aa15.35■□□□□ 0.05
SNED1-205ENST00000405547 IDI1Q13907 227 aa15.35■□□□□ 0.05
SNED1-205ENST00000405547 ZNF830Q96NB3 372 aaPredicted RBP15.35■□□□□ 0.05
SNED1-205ENST00000405547 DCTPP1Q9H773 170 aa15.35■□□□□ 0.05
SNED1-205ENST00000405547 CKAP4Q07065 602 aaKnown RBP15.35■□□□□ 0.05
SNED1-205ENST00000405547 USP5P45974 858 aa15.35■□□□□ 0.05
SNED1-205ENST00000405547 CCDC186Q7Z3E2 898 aa15.35■□□□□ 0.05
SNED1-205ENST00000405547 GOLGA6L10A0A0M3HER8 536 aa15.34■□□□□ 0.05
SNED1-205ENST00000405547 KIF5BP33176 963 aa15.34■□□□□ 0.05
SNED1-205ENST00000405547 MTIF2P46199 727 aaKnown RBP15.34■□□□□ 0.05
SNED1-205ENST00000405547 TYRO3Q06418 890 aa15.34■□□□□ 0.05
SNED1-205ENST00000405547 CCDC178Q5BJE1 867 aa15.34■□□□□ 0.05
SNED1-205ENST00000405547 MPRIPQ6WCQ1 1025 aa15.34■□□□□ 0.05
SNED1-205ENST00000405547 MRPL50Q8N5N7 158 aaKnown RBP15.34■□□□□ 0.05
SNED1-205ENST00000405547 BMP15O95972 392 aa15.34■□□□□ 0.05
SNED1-205ENST00000405547 ZBTB40Q9NUA8 1239 aa15.34■□□□□ 0.05
SNED1-205ENST00000405547 NLRP5P59047 1200 aa15.34■□□□□ 0.05
SNED1-205ENST00000405547 SPECC1Q5M775 1068 aa15.34■□□□□ 0.05
SNED1-205ENST00000405547 TTC12Q9H892 705 aaPredicted RBP15.34■□□□□ 0.05
SNED1-205ENST00000405547 RANBP6O60518 1105 aaKnown RBP15.34■□□□□ 0.05
SNED1-205ENST00000405547 TDRD12Q587J7 1177 aaKnown RBP15.34■□□□□ 0.05
SNED1-205ENST00000405547 CCDC82Q8N4S0 544 aa15.34■□□□□ 0.05
SNED1-205ENST00000405547 DACT1Q9NYF0 836 aa15.34■□□□□ 0.05
SNED1-205ENST00000405547 FAM83GA6ND36 823 aa15.34■□□□□ 0.05
SNED1-205ENST00000405547 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.34■□□□□ 0.05
SNED1-205ENST00000405547 CCDC94Q9BW85 323 aaPredicted RBP15.34■□□□□ 0.05
SNED1-205ENST00000405547 SLU7O95391 586 aaKnown RBP15.34■□□□□ 0.05
SNED1-205ENST00000405547 HLTFQ14527 1009 aaKnown RBP eCLIP15.34■□□□□ 0.05
SNED1-205ENST00000405547 DNM1Q05193 864 aaKnown RBP15.33■□□□□ 0.05
SNED1-205ENST00000405547 RMND1Q9NWS8 449 aa15.33■□□□□ 0.05
SNED1-205ENST00000405547 ZFYP08048 801 aaPredicted RBP15.33■□□□□ 0.04
SNED1-205ENST00000405547 PTCD1O75127 700 aaKnown RBP15.33■□□□□ 0.04
SNED1-205ENST00000405547 JADE2Q9NQC1 790 aa15.33■□□□□ 0.04
SNED1-205ENST00000405547 CCDC175P0C221 793 aa15.33■□□□□ 0.04
SNED1-205ENST00000405547 NPHP3Q7Z494 1330 aa15.33■□□□□ 0.04
SNED1-205ENST00000405547 MRPS27Q92552 414 aaKnown RBP15.33■□□□□ 0.04
SNED1-205ENST00000405547 CCDC113Q9H0I3 377 aa15.33■□□□□ 0.04
SNED1-205ENST00000405547 RBM8AQ9Y5S9 174 aaKnown RBP15.33■□□□□ 0.04
SNED1-205ENST00000405547 MICU3Q86XE3 530 aa15.33■□□□□ 0.04
SNED1-205ENST00000405547 CALML4Q96GE6 196 aa15.33■□□□□ 0.04
SNED1-205ENST00000405547 UBA7P41226 1012 aa15.33■□□□□ 0.04
SNED1-205ENST00000405547 ZC3H6P61129 1189 aaKnown RBP15.33■□□□□ 0.04
SNED1-205ENST00000405547 ANKRD18BA2A2Z9 1011 aa15.32■□□□□ 0.04
SNED1-205ENST00000405547 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.32■□□□□ 0.04
SNED1-205ENST00000405547 CWC25Q9NXE8 425 aaPredicted RBP15.32■□□□□ 0.04
SNED1-205ENST00000405547 TTC41PQ6P2S7 1318 aa15.32■□□□□ 0.04
SNED1-205ENST00000405547 NECAB1Q8N987 351 aa15.32■□□□□ 0.04
SNED1-205ENST00000405547 PUS7Q96PZ0 661 aaKnown RBP15.32■□□□□ 0.04
SNED1-205ENST00000405547 TMOD3Q9NYL9 352 aa15.32■□□□□ 0.04
SNED1-205ENST00000405547 MFSD6Q6ZSS7 791 aa15.32■□□□□ 0.04
SNED1-205ENST00000405547 ATP8B2P98198 1209 aa15.32■□□□□ 0.04
SNED1-205ENST00000405547 UBE3BQ7Z3V4 1068 aa15.32■□□□□ 0.04
SNED1-205ENST00000405547 N4BP3O15049 544 aa15.32■□□□□ 0.04
SNED1-205ENST00000405547 FEZ1Q99689 392 aa15.32■□□□□ 0.04
SNED1-205ENST00000405547 BCCIPQ9P287 314 aaKnown RBP eCLIP15.32■□□□□ 0.04
SNED1-205ENST00000405547 CTAGE9A4FU28 777 aa15.31■□□□□ 0.04
SNED1-205ENST00000405547 PIP4K2BP78356 416 aa15.31■□□□□ 0.04
SNED1-205ENST00000405547 ISM2Q6H9L7 571 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms