RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 LIMCH1Q9UPQ0 1083 aa19.57■□□□□ 0.72
CDKN1A-203ENST00000405375 AFDNP55196 1824 aaKnown RBP19.57■□□□□ 0.72
CDKN1A-203ENST00000405375 WDR17Q8IZU2 1322 aa19.57■□□□□ 0.72
CDKN1A-203ENST00000405375 TM6SF1Q9BZW5 370 aa19.56■□□□□ 0.72
CDKN1A-203ENST00000405375 CASTP20810 708 aaKnown RBP19.56■□□□□ 0.72
CDKN1A-203ENST00000405375 PTPN12Q05209 780 aaKnown RBP19.56■□□□□ 0.72
CDKN1A-203ENST00000405375 PLBD2Q8NHP8 589 aa19.56■□□□□ 0.72
CDKN1A-203ENST00000405375 FAM227BQ96M60 508 aa19.56■□□□□ 0.72
CDKN1A-203ENST00000405375 RPAP1Q9BWH6 1393 aaPredicted RBP19.56■□□□□ 0.72
CDKN1A-203ENST00000405375 CASP7P55210 303 aa19.55■□□□□ 0.72
CDKN1A-203ENST00000405375 NMIQ13287 307 aaPredicted RBP19.55■□□□□ 0.72
CDKN1A-203ENST00000405375 ADCK5Q3MIX3 580 aa19.55■□□□□ 0.72
CDKN1A-203ENST00000405375 PRPF40BQ6NWY9 871 aaKnown RBP19.55■□□□□ 0.72
CDKN1A-203ENST00000405375 UBE3BQ7Z3V4 1068 aa19.55■□□□□ 0.72
CDKN1A-203ENST00000405375 ERBB4Q15303 1308 aa19.55■□□□□ 0.72
CDKN1A-203ENST00000405375 WDR33Q9C0J8 1336 aaKnown RBP19.55■□□□□ 0.72
CDKN1A-203ENST00000405375 JARID2Q92833 1246 aaPredicted RBP19.55■□□□□ 0.72
CDKN1A-203ENST00000405375 BOLA2Q9H3K6 86 aa19.55■□□□□ 0.72
CDKN1A-203ENST00000405375 ZSWIM6Q9HCJ5 1215 aa19.55■□□□□ 0.72
CDKN1A-203ENST00000405375 PCDH11XQ9BZA7 1347 aa19.54■□□□□ 0.72
CDKN1A-203ENST00000405375 PCDH11YQ9BZA8 1340 aa19.54■□□□□ 0.72
CDKN1A-203ENST00000405375 CPA1P15085 419 aa19.54■□□□□ 0.72
CDKN1A-203ENST00000405375 MAP4K1Q92918 833 aa19.54■□□□□ 0.72
CDKN1A-203ENST00000405375 NSFL1CQ9UNZ2 370 aaKnown RBP19.54■□□□□ 0.72
CDKN1A-203ENST00000405375 NBPF26B4DH59 902 aa19.54■□□□□ 0.72
CDKN1A-203ENST00000405375 ATP5J2-PTCD1G3V325 749 aa19.54■□□□□ 0.72
CDKN1A-203ENST00000405375 PTCD1O75127 700 aaKnown RBP19.54■□□□□ 0.72
CDKN1A-203ENST00000405375 NASPP49321 788 aaPredicted RBP19.54■□□□□ 0.72
CDKN1A-203ENST00000405375 NBPF14Q5TI25 921 aa19.54■□□□□ 0.72
CDKN1A-203ENST00000405375 VPS53Q5VIR6 699 aa19.54■□□□□ 0.72
CDKN1A-203ENST00000405375 NBPF10Q6P3W6 841 aaKnown RBP19.54■□□□□ 0.72
CDKN1A-203ENST00000405375 NBPF15Q8N660 670 aa19.54■□□□□ 0.72
CDKN1A-203ENST00000405375 PRDM11Q9NQV5 511 aa19.54■□□□□ 0.72
CDKN1A-203ENST00000405375 SOS2Q07890 1332 aaPredicted RBP19.53■□□□□ 0.72
CDKN1A-203ENST00000405375 ZNF335Q9H4Z2 1342 aaPredicted RBP19.53■□□□□ 0.72
CDKN1A-203ENST00000405375 COL5A2P05997 1499 aaPredicted RBP19.53■□□□□ 0.72
CDKN1A-203ENST00000405375 UBR2Q8IWV8 1755 aa19.53■□□□□ 0.72
CDKN1A-203ENST00000405375 ZCRB1Q8TBF4 217 aaKnown RBP19.53■□□□□ 0.72
CDKN1A-203ENST00000405375 JAKMIP1Q96N16 626 aaKnown RBP19.53■□□□□ 0.72
CDKN1A-203ENST00000405375 TMEM63CQ9P1W3 806 aa19.53■□□□□ 0.72
CDKN1A-203ENST00000405375 RBM27Q9P2N5 1060 aaKnown RBP19.53■□□□□ 0.72
CDKN1A-203ENST00000405375 MED23Q9ULK4 1368 aa19.53■□□□□ 0.72
CDKN1A-203ENST00000405375 A0A087WZG4 1122 aa19.53■□□□□ 0.72
CDKN1A-203ENST00000405375 A0A0D9SFI3 127 aa19.53■□□□□ 0.72
CDKN1A-203ENST00000405375 MBD3O95983 291 aa19.53■□□□□ 0.72
CDKN1A-203ENST00000405375 RBM8AQ9Y5S9 174 aaKnown RBP19.53■□□□□ 0.72
CDKN1A-203ENST00000405375 LARP6Q9BRS8 491 aaKnown RBP19.52■□□□□ 0.72
CDKN1A-203ENST00000405375 DBNLQ9UJU6 430 aaKnown RBP19.52■□□□□ 0.72
CDKN1A-203ENST00000405375 ERVV-2B6SEH9 535 aa19.51■□□□□ 0.71
CDKN1A-203ENST00000405375 NKX1-1Q15270 411 aaPredicted RBP19.51■□□□□ 0.71
CDKN1A-203ENST00000405375 TNNI3KQ59H18 835 aa19.51■□□□□ 0.71
CDKN1A-203ENST00000405375 CREB3L3Q68CJ9 461 aa19.51■□□□□ 0.71
CDKN1A-203ENST00000405375 TOM1L2Q6ZVM7 507 aa19.51■□□□□ 0.71
CDKN1A-203ENST00000405375 FSD1Q9BTV5 496 aa19.51■□□□□ 0.71
CDKN1A-203ENST00000405375 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.51■□□□□ 0.71
CDKN1A-203ENST00000405375 FPGT-TNNI3KV9GXZ4 949 aa19.51■□□□□ 0.71
CDKN1A-203ENST00000405375 LARGE1O95461 756 aa19.51■□□□□ 0.71
CDKN1A-203ENST00000405375 ATP5JP18859 108 aa19.51■□□□□ 0.71
CDKN1A-203ENST00000405375 PDRG1Q9NUG6 133 aa19.51■□□□□ 0.71
CDKN1A-203ENST00000405375 CYP46A1Q9Y6A2 500 aa19.51■□□□□ 0.71
CDKN1A-203ENST00000405375 JCADQ9P266 1359 aa19.51■□□□□ 0.71
CDKN1A-203ENST00000405375 KCPQ6ZWJ8 1503 aa19.51■□□□□ 0.71
CDKN1A-203ENST00000405375 ZKSCAN1P17029 563 aaPredicted RBP19.5■□□□□ 0.71
CDKN1A-203ENST00000405375 TFCP2Q12800 502 aa19.5■□□□□ 0.71
CDKN1A-203ENST00000405375 PRIM1P49642 420 aaKnown RBP19.5■□□□□ 0.71
CDKN1A-203ENST00000405375 PPP1R9BQ96SB3 815 aa19.5■□□□□ 0.71
CDKN1A-203ENST00000405375 PAPPAQ13219 1627 aa19.49■□□□□ 0.71
CDKN1A-203ENST00000405375 H7C1W4 665 aa19.49■□□□□ 0.71
CDKN1A-203ENST00000405375 NUP188Q5SRE5 1749 aa19.49■□□□□ 0.71
CDKN1A-203ENST00000405375 SLC27A2O14975 620 aa19.49■□□□□ 0.71
CDKN1A-203ENST00000405375 CCDC173Q0VFZ6 552 aa19.49■□□□□ 0.71
CDKN1A-203ENST00000405375 ZSCAN31Q96LW9 406 aaPredicted RBP19.49■□□□□ 0.71
CDKN1A-203ENST00000405375 SH2B1Q9NRF2 756 aaPredicted RBP19.49■□□□□ 0.71
CDKN1A-203ENST00000405375 SYT1P21579 422 aa19.48■□□□□ 0.71
CDKN1A-203ENST00000405375 FOXO4P98177 505 aa19.48■□□□□ 0.71
CDKN1A-203ENST00000405375 RBSNQ9H1K0 784 aa19.48■□□□□ 0.71
CDKN1A-203ENST00000405375 SHANK3Q9BYB0 1731 aa19.48■□□□□ 0.71
CDKN1A-203ENST00000405375 STX6O43752 255 aa19.48■□□□□ 0.71
CDKN1A-203ENST00000405375 ZSCAN22P10073 491 aaPredicted RBP19.48■□□□□ 0.71
CDKN1A-203ENST00000405375 TTLL7Q6ZT98 887 aa19.48■□□□□ 0.71
CDKN1A-203ENST00000405375 ZNF589Q86UQ0 364 aaPredicted RBP19.48■□□□□ 0.71
CDKN1A-203ENST00000405375 TMEM87AQ8NBN3 555 aa19.48■□□□□ 0.71
CDKN1A-203ENST00000405375 EDC3Q96F86 508 aaKnown RBP19.48■□□□□ 0.71
CDKN1A-203ENST00000405375 CARD10Q9BWT7 1032 aa19.48■□□□□ 0.71
CDKN1A-203ENST00000405375 SLAIN2Q9P270 581 aa19.48■□□□□ 0.71
CDKN1A-203ENST00000405375 SMC3Q9UQE7 1217 aa19.48■□□□□ 0.71
CDKN1A-203ENST00000405375 TCHHQ07283 1943 aa19.47■□□□□ 0.71
CDKN1A-203ENST00000405375 ST3GAL1Q11201 340 aa19.47■□□□□ 0.71
CDKN1A-203ENST00000405375 LRSAM1Q6UWE0 723 aa19.47■□□□□ 0.71
CDKN1A-203ENST00000405375 LMBR1LQ6UX01 489 aa19.47■□□□□ 0.71
CDKN1A-203ENST00000405375 TNS2Q63HR2 1409 aa19.47■□□□□ 0.71
CDKN1A-203ENST00000405375 ABCA3Q99758 1704 aa19.47■□□□□ 0.71
CDKN1A-203ENST00000405375 IL2RBP14784 551 aa19.46■□□□□ 0.71
CDKN1A-203ENST00000405375 CLCN1P35523 988 aa19.46■□□□□ 0.71
CDKN1A-203ENST00000405375 KCNJ4P48050 445 aa19.46■□□□□ 0.71
CDKN1A-203ENST00000405375 RFX7Q2KHR2 1363 aa19.46■□□□□ 0.71
CDKN1A-203ENST00000405375 TJP1Q07157 1748 aa19.46■□□□□ 0.71
CDKN1A-203ENST00000405375 COL9A3Q14050 684 aaPredicted RBP19.46■□□□□ 0.71
CDKN1A-203ENST00000405375 CCDC83Q8IWF9 413 aa19.46■□□□□ 0.71
CDKN1A-203ENST00000405375 GDPD2Q9HCC8 539 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms