RNA–Protein interactions for RNA: ENST00000404753.7

CAPN10-208, Transcript of calpain 10, human

APPRIS ALT2 TSL 5 BASIC

Gene CAPN10, Length 2,570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN10-208	ENST00000404753	C11orf57	Q6ZUT1	292 aa	Predicted RBP	27.85	■■■□□ 2.05
CAPN10-208	ENST00000404753	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	27.85	■■■□□ 2.05
CAPN10-208	ENST00000404753	TTC21A	Q8NDW8	1320 aa		27.85	■■■□□ 2.05
CAPN10-208	ENST00000404753	CPSF1	Q10570	1443 aa	Known RBP	27.85	■■■□□ 2.05
CAPN10-208	ENST00000404753	RPGRIP1L	Q68CZ1	1315 aa		27.84	■■■□□ 2.05
CAPN10-208	ENST00000404753	NEMF	O60524	1076 aa		27.84	■■■□□ 2.05
CAPN10-208	ENST00000404753	MUM1L1	Q5H9M0	696 aa		27.84	■■■□□ 2.05
CAPN10-208	ENST00000404753	EFCC1	Q9HA90	598 aa		27.84	■■■□□ 2.05
CAPN10-208	ENST00000404753	DDX19A	Q9NUU7	478 aa	Known RBP	27.84	■■■□□ 2.05
CAPN10-208	ENST00000404753		A0A087WWV3	80 aa		27.84	■■■□□ 2.05
CAPN10-208	ENST00000404753	EPB41L2	O43491	1005 aa	Known RBP	27.83	■■■□□ 2.05
CAPN10-208	ENST00000404753	MRFAP1L1	Q96HT8	127 aa		27.83	■■■□□ 2.05
CAPN10-208	ENST00000404753	SPATA32	Q96LK8	384 aa		27.83	■■■□□ 2.05
CAPN10-208	ENST00000404753	LRRFIP2	Q9Y608	721 aa	Known RBP	27.83	■■■□□ 2.05
CAPN10-208	ENST00000404753	GOLGA6L19	H0YKK7	550 aa		27.83	■■■□□ 2.05
CAPN10-208	ENST00000404753	MYO1C	O00159	1063 aa		27.83	■■■□□ 2.05
CAPN10-208	ENST00000404753	SEC31A	O94979	1220 aa	Known RBP	27.83	■■■□□ 2.05
CAPN10-208	ENST00000404753	CCDC93	Q567U6	631 aa		27.83	■■■□□ 2.05
CAPN10-208	ENST00000404753	TEX35	Q5T0J7	233 aa		27.83	■■■□□ 2.05
CAPN10-208	ENST00000404753	PDRG1	Q9NUG6	133 aa		27.83	■■■□□ 2.05
CAPN10-208	ENST00000404753	CDK12	Q9NYV4	1490 aa	Predicted RBP	27.82	■■■□□ 2.04
CAPN10-208	ENST00000404753	SNW1	Q13573	536 aa	Known RBP	27.82	■■■□□ 2.04
CAPN10-208	ENST00000404753	CWC27	Q6UX04	472 aa	Known RBP	27.82	■■■□□ 2.04
CAPN10-208	ENST00000404753	MCM10	Q7L590	875 aa		27.82	■■■□□ 2.04
CAPN10-208	ENST00000404753	SARM1	Q6SZW1	724 aa		27.82	■■■□□ 2.04
CAPN10-208	ENST00000404753	TXLNB	Q8N3L3	684 aa		27.82	■■■□□ 2.04
CAPN10-208	ENST00000404753	PGBD1	Q96JS3	809 aa		27.82	■■■□□ 2.04
CAPN10-208	ENST00000404753	FER1L4	A9Z1Z3	1794 aa		27.82	■■■□□ 2.04
CAPN10-208	ENST00000404753	MAP2	P11137	1827 aa	Known RBP	27.82	■■■□□ 2.04
CAPN10-208	ENST00000404753	TNR	Q92752	1358 aa		27.81	■■■□□ 2.04
CAPN10-208	ENST00000404753	DHX16	O60231	1041 aa	Known RBP	27.81	■■■□□ 2.04
CAPN10-208	ENST00000404753	JAKMIP1	Q96N16	626 aa	Known RBP	27.81	■■■□□ 2.04
CAPN10-208	ENST00000404753	GORAB	Q5T7V8	394 aa		27.81	■■■□□ 2.04
CAPN10-208	ENST00000404753	E4F1	Q66K89	784 aa	Predicted RBP	27.8	■■■□□ 2.04
CAPN10-208	ENST00000404753	LEO1	Q8WVC0	666 aa	Predicted RBP	27.8	■■■□□ 2.04
CAPN10-208	ENST00000404753	TTC21B	Q7Z4L5	1316 aa		27.8	■■■□□ 2.04
CAPN10-208	ENST00000404753	COL9A3	Q14050	684 aa	Predicted RBP	27.8	■■■□□ 2.04
CAPN10-208	ENST00000404753	MIS18A	Q9NYP9	233 aa		27.8	■■■□□ 2.04
CAPN10-208	ENST00000404753	NPHP3	Q7Z494	1330 aa		27.8	■■■□□ 2.04
CAPN10-208	ENST00000404753	CHL1	O00533	1208 aa		27.79	■■■□□ 2.04
CAPN10-208	ENST00000404753	ZSCAN26	Q16670	478 aa		27.79	■■■□□ 2.04
CAPN10-208	ENST00000404753	CCDC191	Q8NCU4	936 aa		27.79	■■■□□ 2.04
CAPN10-208	ENST00000404753	BICD2	Q8TD16	824 aa		27.79	■■■□□ 2.04
CAPN10-208	ENST00000404753	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	27.79	■■■□□ 2.04
CAPN10-208	ENST00000404753	TMCO3	Q6UWJ1	677 aa		27.79	■■■□□ 2.04
CAPN10-208	ENST00000404753	A2ML1	A8K2U0	1454 aa		27.79	■■■□□ 2.04
CAPN10-208	ENST00000404753	TPM4	P67936	248 aa		27.78	■■■□□ 2.04
CAPN10-208	ENST00000404753	TEX2	Q8IWB9	1127 aa		27.78	■■■□□ 2.04
CAPN10-208	ENST00000404753	CCT4	P50991	539 aa	Known RBP	27.77	■■■□□ 2.04
CAPN10-208	ENST00000404753	ATP8B2	P98198	1209 aa		27.77	■■■□□ 2.04
CAPN10-208	ENST00000404753	VPS53	Q5VIR6	699 aa		27.77	■■■□□ 2.04
CAPN10-208	ENST00000404753	PPP1R13B	Q96KQ4	1090 aa		27.77	■■■□□ 2.04
CAPN10-208	ENST00000404753	PRAM1	Q96QH2	718 aa		27.77	■■■□□ 2.04
CAPN10-208	ENST00000404753	TPCN1	Q9ULQ1	816 aa		27.77	■■■□□ 2.04
CAPN10-208	ENST00000404753	C3	P01024	1663 aa		27.77	■■■□□ 2.04
CAPN10-208	ENST00000404753	SASH3	O75995	380 aa		27.77	■■■□□ 2.04
CAPN10-208	ENST00000404753	PTH1R	Q03431	593 aa		27.76	■■■□□ 2.03
CAPN10-208	ENST00000404753	PI4K2B	Q8TCG2	481 aa		27.76	■■■□□ 2.03
CAPN10-208	ENST00000404753	SCAND2P	Q9GZW5	306 aa	Predicted RBP	27.76	■■■□□ 2.03
CAPN10-208	ENST00000404753	SH2B1	Q9NRF2	756 aa	Predicted RBP	27.76	■■■□□ 2.03
CAPN10-208	ENST00000404753	YTHDC2	Q9H6S0	1430 aa	Known RBP	27.76	■■■□□ 2.03
CAPN10-208	ENST00000404753	EPC1	Q9H2F5	836 aa		27.76	■■■□□ 2.03
CAPN10-208	ENST00000404753	ATG3	Q9NT62	314 aa		27.76	■■■□□ 2.03
CAPN10-208	ENST00000404753	ORC3	Q9UBD5	711 aa	Predicted RBP	27.76	■■■□□ 2.03
CAPN10-208	ENST00000404753	ZRANB1	Q9UGI0	708 aa		27.76	■■■□□ 2.03
CAPN10-208	ENST00000404753	OAS2	P29728	719 aa	Known RBP	27.75	■■■□□ 2.03
CAPN10-208	ENST00000404753	PRPF40B	Q6NWY9	871 aa	Known RBP	27.75	■■■□□ 2.03
CAPN10-208	ENST00000404753	KCND1	Q9NSA2	647 aa		27.75	■■■□□ 2.03
CAPN10-208	ENST00000404753	KIF2A	O00139	706 aa	Predicted RBP	27.75	■■■□□ 2.03
CAPN10-208	ENST00000404753	HAP1	P54257	671 aa	Predicted RBP	27.75	■■■□□ 2.03
CAPN10-208	ENST00000404753	ZSCAN31	Q96LW9	406 aa	Predicted RBP	27.75	■■■□□ 2.03
CAPN10-208	ENST00000404753	UBXN6	Q9BZV1	441 aa		27.75	■■■□□ 2.03
CAPN10-208	ENST00000404753	KIF20B	Q96Q89	1820 aa		27.75	■■■□□ 2.03
CAPN10-208	ENST00000404753	CHRM1	P11229	460 aa	Predicted RBP	27.74	■■■□□ 2.03
CAPN10-208	ENST00000404753	GNAI3	P08754	354 aa		27.74	■■■□□ 2.03
CAPN10-208	ENST00000404753	SECISBP2L	Q93073	1101 aa	Known RBP	27.74	■■■□□ 2.03
CAPN10-208	ENST00000404753	CASQ1	P31415	396 aa		27.73	■■■□□ 2.03
CAPN10-208	ENST00000404753	CDK19	Q9BWU1	502 aa		27.73	■■■□□ 2.03
CAPN10-208	ENST00000404753	RRS1	Q15050	365 aa	Known RBP	27.73	■■■□□ 2.03
CAPN10-208	ENST00000404753	LARP1	Q6PKG0	1096 aa	Known RBP	27.73	■■■□□ 2.03
CAPN10-208	ENST00000404753	UBXN4	Q92575	508 aa		27.73	■■■□□ 2.03
CAPN10-208	ENST00000404753	ZSWIM6	Q9HCJ5	1215 aa		27.73	■■■□□ 2.03
CAPN10-208	ENST00000404753	CYP46A1	Q9Y6A2	500 aa		27.73	■■■□□ 2.03
CAPN10-208	ENST00000404753	IFIT2	P09913	472 aa	Known RBP	27.72	■■■□□ 2.03
CAPN10-208	ENST00000404753	BECN2	A8MW95	431 aa		27.72	■■■□□ 2.03
CAPN10-208	ENST00000404753	NBPF11	Q86T75	865 aa		27.72	■■■□□ 2.03
CAPN10-208	ENST00000404753	REXO1L1P	Q8IX06	675 aa		27.72	■■■□□ 2.03
CAPN10-208	ENST00000404753	DHX40	Q8IX18	779 aa	Known RBP	27.72	■■■□□ 2.03
CAPN10-208	ENST00000404753	CCDC34	Q96HJ3	373 aa		27.72	■■■□□ 2.03
CAPN10-208	ENST00000404753	YY1AP1	Q9H869	796 aa		27.71	■■■□□ 2.03
CAPN10-208	ENST00000404753	ARGLU1	Q9NWB6	273 aa	Predicted RBP	27.71	■■■□□ 2.03
CAPN10-208	ENST00000404753	AOX1	Q06278	1338 aa		27.71	■■■□□ 2.03
CAPN10-208	ENST00000404753	TBC1D8	O95759	1140 aa		27.7	■■■□□ 2.03
CAPN10-208	ENST00000404753	GTF2A1	P52655	376 aa	Predicted RBP	27.7	■■■□□ 2.03
CAPN10-208	ENST00000404753	SOX12	O15370	315 aa		27.7	■■■□□ 2.02
CAPN10-208	ENST00000404753	FBXW7	Q969H0	707 aa		27.7	■■■□□ 2.02
CAPN10-208	ENST00000404753	TCEANC2	Q96MN5	208 aa		27.7	■■■□□ 2.02
CAPN10-208	ENST00000404753	SRL	Q86TD4	932 aa		27.69	■■■□□ 2.02
CAPN10-208	ENST00000404753	CAVIN2	O95810	425 aa		27.69	■■■□□ 2.02
CAPN10-208	ENST00000404753	LOC102724159	A0A0B4J2E5	919 aa		27.68	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 244.5 ms