RNA–Protein interactions for RNA: ENST00000404049.7

KDM5C-205, Transcript of lysine demethylase 5C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM5C, Length 5,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-205ENST00000404049 AMOTQ4VCS5 1084 aa17.52■□□□□ 0.4
KDM5C-205ENST00000404049 HOMER2Q9NSB8 354 aa17.52■□□□□ 0.4
KDM5C-205ENST00000404049 C8orf34Q49A92 452 aa17.52■□□□□ 0.39
KDM5C-205ENST00000404049 FAM114A1Q8IWE2 563 aa17.52■□□□□ 0.39
KDM5C-205ENST00000404049 CEP83Q9Y592 693 aa17.52■□□□□ 0.39
KDM5C-205ENST00000404049 CDK13Q14004 1512 aaKnown RBP17.51■□□□□ 0.39
KDM5C-205ENST00000404049 TTC31Q49AM3 519 aaPredicted RBP17.51■□□□□ 0.39
KDM5C-205ENST00000404049 DNAI1Q9UI46 699 aa17.51■□□□□ 0.39
KDM5C-205ENST00000404049 UBASH3AP57075 661 aa17.51■□□□□ 0.39
KDM5C-205ENST00000404049 CTCFLQ8NI51 663 aaPredicted RBP17.51■□□□□ 0.39
KDM5C-205ENST00000404049 ARFGAP3Q9NP61 516 aa17.51■□□□□ 0.39
KDM5C-205ENST00000404049 NLRP5P59047 1200 aa17.51■□□□□ 0.39
KDM5C-205ENST00000404049 CCDC160A6NGH7 325 aa17.5■□□□□ 0.39
KDM5C-205ENST00000404049 IFIT3O14879 490 aaKnown RBP17.5■□□□□ 0.39
KDM5C-205ENST00000404049 ZC3H6P61129 1189 aaKnown RBP17.5■□□□□ 0.39
KDM5C-205ENST00000404049 USP16Q9Y5T5 823 aa17.5■□□□□ 0.39
KDM5C-205ENST00000404049 CAVIN4Q5BKX8 364 aa17.5■□□□□ 0.39
KDM5C-205ENST00000404049 FAM200AQ8TCP9 573 aa17.5■□□□□ 0.39
KDM5C-205ENST00000404049 NAP1L3Q99457 506 aaPredicted RBP17.5■□□□□ 0.39
KDM5C-205ENST00000404049 ZSCAN16Q9H4T2 348 aaPredicted RBP17.5■□□□□ 0.39
KDM5C-205ENST00000404049 ATP2C2O75185 946 aa17.5■□□□□ 0.39
KDM5C-205ENST00000404049 PRIM1P49642 420 aaKnown RBP17.5■□□□□ 0.39
KDM5C-205ENST00000404049 GRIPAP1Q4V328 841 aa17.5■□□□□ 0.39
KDM5C-205ENST00000404049 EHBP1Q8NDI1 1231 aa17.5■□□□□ 0.39
KDM5C-205ENST00000404049 NEK1Q96PY6 1258 aa17.5■□□□□ 0.39
KDM5C-205ENST00000404049 CPSF2Q9P2I0 782 aaKnown RBP17.5■□□□□ 0.39
KDM5C-205ENST00000404049 HDAC1Q13547 482 aaPredicted RBP17.5■□□□□ 0.39
KDM5C-205ENST00000404049 CCDC102BQ68D86 513 aa17.5■□□□□ 0.39
KDM5C-205ENST00000404049 TMOD2Q9NZR1 351 aa17.5■□□□□ 0.39
KDM5C-205ENST00000404049 DNMBPQ6XZF7 1577 aa17.5■□□□□ 0.39
KDM5C-205ENST00000404049 TMEM266Q2M3C6 531 aa17.5■□□□□ 0.39
KDM5C-205ENST00000404049 BICDL1Q6ZP65 573 aa17.5■□□□□ 0.39
KDM5C-205ENST00000404049 CCDC144CPQ8IYA2 1237 aa17.5■□□□□ 0.39
KDM5C-205ENST00000404049 TTC12Q9H892 705 aaPredicted RBP17.5■□□□□ 0.39
KDM5C-205ENST00000404049 ECHDC1Q9NTX5 307 aa17.5■□□□□ 0.39
KDM5C-205ENST00000404049 KANK3Q6NY19 840 aa17.49■□□□□ 0.39
KDM5C-205ENST00000404049 SNX21Q969T3 373 aa17.49■□□□□ 0.39
KDM5C-205ENST00000404049 TMOD3Q9NYL9 352 aa17.49■□□□□ 0.39
KDM5C-205ENST00000404049 CTAGE15A4D2H0 777 aa17.49■□□□□ 0.39
KDM5C-205ENST00000404049 RANBP6O60518 1105 aaKnown RBP17.49■□□□□ 0.39
KDM5C-205ENST00000404049 PPFIA3O75145 1194 aa17.49■□□□□ 0.39
KDM5C-205ENST00000404049 CTAGE8P0CG41 777 aa17.49■□□□□ 0.39
KDM5C-205ENST00000404049 CKAP4Q07065 602 aaKnown RBP17.49■□□□□ 0.39
KDM5C-205ENST00000404049 CTAGE6Q86UF2 777 aa17.49■□□□□ 0.39
KDM5C-205ENST00000404049 CTAGE4Q8IX94 777 aa17.49■□□□□ 0.39
KDM5C-205ENST00000404049 CCDC155Q8N6L0 562 aa17.49■□□□□ 0.39
KDM5C-205ENST00000404049 MICALL1Q8N3F8 863 aa17.49■□□□□ 0.39
KDM5C-205ENST00000404049 NECAB1Q8N987 351 aa17.49■□□□□ 0.39
KDM5C-205ENST00000404049 RNF216Q9NWF9 866 aaPredicted RBP17.49■□□□□ 0.39
KDM5C-205ENST00000404049 KIAA0586Q9BVV6 1533 aa17.49■□□□□ 0.39
KDM5C-205ENST00000404049 CAMSAP2Q08AD1 1489 aa17.48■□□□□ 0.39
KDM5C-205ENST00000404049 MAP3K1Q13233 1512 aa17.48■□□□□ 0.39
KDM5C-205ENST00000404049 CCDC194A0A1B0GVG4 234 aa17.48■□□□□ 0.39
KDM5C-205ENST00000404049 SLU7O95391 586 aaKnown RBP17.48■□□□□ 0.39
KDM5C-205ENST00000404049 PRPF4BQ13523 1007 aaKnown RBP17.48■□□□□ 0.39
KDM5C-205ENST00000404049 RAB34Q9BZG1 259 aa17.48■□□□□ 0.39
KDM5C-205ENST00000404049 HMGXB3Q12766 1538 aa17.48■□□□□ 0.39
KDM5C-205ENST00000404049 SDSP20132 328 aa17.48■□□□□ 0.39
KDM5C-205ENST00000404049 ORC3Q9UBD5 711 aaPredicted RBP17.48■□□□□ 0.39
KDM5C-205ENST00000404049 SETSIPP0DME0 302 aa17.48■□□□□ 0.39
KDM5C-205ENST00000404049 MCM6Q14566 821 aa17.48■□□□□ 0.39
KDM5C-205ENST00000404049 ANKS4BQ8N8V4 417 aa17.48■□□□□ 0.39
KDM5C-205ENST00000404049 MKNK2Q9HBH9 465 aa17.48■□□□□ 0.39
KDM5C-205ENST00000404049 FAM135AQ9P2D6 1515 aa17.48■□□□□ 0.39
KDM5C-205ENST00000404049 HMG20BQ9P0W2 317 aa17.47■□□□□ 0.39
KDM5C-205ENST00000404049 PTPN23Q9H3S7 1636 aa17.47■□□□□ 0.39
KDM5C-205ENST00000404049 NOL3O60936 208 aaKnown RBP17.47■□□□□ 0.39
KDM5C-205ENST00000404049 IARSP41252 1262 aaKnown RBP17.47■□□□□ 0.39
KDM5C-205ENST00000404049 MAP3K12Q12852 859 aa17.47■□□□□ 0.39
KDM5C-205ENST00000404049 CCDC40Q4G0X9 1142 aa17.47■□□□□ 0.39
KDM5C-205ENST00000404049 DNAJC25Q9H1X3 360 aa17.47■□□□□ 0.39
KDM5C-205ENST00000404049 MAGI1Q96QZ7 1491 aaPredicted RBP17.47■□□□□ 0.39
KDM5C-205ENST00000404049 MACROD2A1Z1Q3 448 aa17.47■□□□□ 0.39
KDM5C-205ENST00000404049 OPA1O60313 960 aa17.47■□□□□ 0.39
KDM5C-205ENST00000404049 NOP2P46087 812 aaKnown RBP17.47■□□□□ 0.39
KDM5C-205ENST00000404049 TNIP1Q15025 636 aa17.47■□□□□ 0.39
KDM5C-205ENST00000404049 RAB11FIP4Q86YS3 637 aa17.47■□□□□ 0.39
KDM5C-205ENST00000404049 KIF20AO95235 890 aa17.47■□□□□ 0.39
KDM5C-205ENST00000404049 AOPEPQ8N6M6 819 aa17.47■□□□□ 0.39
KDM5C-205ENST00000404049 RSRC1Q96IZ7 334 aaKnown RBP17.47■□□□□ 0.39
KDM5C-205ENST00000404049 SYKP43405 635 aa17.46■□□□□ 0.39
KDM5C-205ENST00000404049 FLIIQ13045 1269 aa17.46■□□□□ 0.39
KDM5C-205ENST00000404049 IQCA1Q86XH1 822 aa17.46■□□□□ 0.39
KDM5C-205ENST00000404049 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.46■□□□□ 0.395e-7■□□□□ 10.1
KDM5C-205ENST00000404049 ARHGEF11O15085 1522 aa17.46■□□□□ 0.39
KDM5C-205ENST00000404049 KIF5BP33176 963 aa17.46■□□□□ 0.39
KDM5C-205ENST00000404049 A0A087WZG4 1122 aa17.46■□□□□ 0.39
KDM5C-205ENST00000404049 N4BP3O15049 544 aa17.46■□□□□ 0.39
KDM5C-205ENST00000404049 HS1BP3Q53T59 392 aa17.46■□□□□ 0.39
KDM5C-205ENST00000404049 CCDC121Q6ZUS5 278 aa17.46■□□□□ 0.39
KDM5C-205ENST00000404049 RAB3GAP1Q15042 981 aa17.46■□□□□ 0.39
KDM5C-205ENST00000404049 HYPKQ9NX55 129 aa17.46■□□□□ 0.39
KDM5C-205ENST00000404049 CATIPQ7Z7H3 387 aa17.45■□□□□ 0.38
KDM5C-205ENST00000404049 RNF41Q9H4P4 317 aaPredicted RBP17.45■□□□□ 0.38
KDM5C-205ENST00000404049 METAP2P50579 478 aaKnown RBP eCLIP17.45■□□□□ 0.384e-7■■■□□ 18.1
KDM5C-205ENST00000404049 AMPD3Q01432 767 aa17.45■□□□□ 0.38
KDM5C-205ENST00000404049 EMILIN1Q9Y6C2 1016 aa17.45■□□□□ 0.38
KDM5C-205ENST00000404049 CEP57Q86XR8 500 aa17.45■□□□□ 0.38
KDM5C-205ENST00000404049 TSNARE1Q96NA8 513 aa17.45■□□□□ 0.38
KDM5C-205ENST00000404049 IQGAP2Q13576 1575 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms