RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 ZBTB3Q9H5J0 574 aa28.73■■■□□ 2.19
TRIOBP-203ENST00000403663 FOXD4L1Q9NU39 408 aa28.73■■■□□ 2.19
TRIOBP-203ENST00000403663 K7ELQ4 463 aaPredicted RBP28.72■■■□□ 2.19
TRIOBP-203ENST00000403663 BMP2KLQ5H9B9 411 aa28.72■■■□□ 2.19
TRIOBP-203ENST00000403663 LINC00116Q8NCU8 138 aa28.72■■■□□ 2.19
TRIOBP-203ENST00000403663 MYD88Q99836 296 aa28.72■■■□□ 2.19
TRIOBP-203ENST00000403663 BCL11BQ9C0K0 894 aaPredicted RBP28.72■■■□□ 2.19
TRIOBP-203ENST00000403663 IBTKQ9P2D0 1353 aaPredicted RBP28.72■■■□□ 2.19
TRIOBP-203ENST00000403663 RREB1Q92766 1687 aa28.71■■■□□ 2.19
TRIOBP-203ENST00000403663 AFDNP55196 1824 aaKnown RBP28.71■■■□□ 2.19
TRIOBP-203ENST00000403663 PLBD2Q8NHP8 589 aa28.71■■■□□ 2.19
TRIOBP-203ENST00000403663 CHMP4BQ9H444 224 aaKnown RBP28.71■■■□□ 2.19
TRIOBP-203ENST00000403663 OFD1O75665 1012 aa28.71■■■□□ 2.19
TRIOBP-203ENST00000403663 NBPF7P0C2Y1 421 aaPredicted RBP28.71■■■□□ 2.19
TRIOBP-203ENST00000403663 CLEC17AQ6ZS10 378 aa28.71■■■□□ 2.19
TRIOBP-203ENST00000403663 METTL22Q9BUU2 404 aaPredicted RBP28.71■■■□□ 2.19
TRIOBP-203ENST00000403663 SSFA2P28290 1259 aa28.7■■■□□ 2.19
TRIOBP-203ENST00000403663 CCDC87Q9NVE4 849 aa28.69■■■□□ 2.18
TRIOBP-203ENST00000403663 ATP5J2-PTCD1G3V325 749 aa28.69■■■□□ 2.18
TRIOBP-203ENST00000403663 KLHL40Q2TBA0 621 aa28.69■■■□□ 2.18
TRIOBP-203ENST00000403663 LINS1Q8NG48 757 aa28.69■■■□□ 2.18
TRIOBP-203ENST00000403663 GOLGA6L22H0YM25 854 aa28.68■■■□□ 2.18
TRIOBP-203ENST00000403663 TAF1LQ8IZX4 1826 aa28.67■■■□□ 2.18
TRIOBP-203ENST00000403663 ANP32BQ92688 251 aaKnown RBP28.67■■■□□ 2.18
TRIOBP-203ENST00000403663 NEURL1BA8MQ27 555 aa28.66■■■□□ 2.18
TRIOBP-203ENST00000403663 CEP85Q6P2H3 762 aa28.66■■■□□ 2.18
TRIOBP-203ENST00000403663 LRRFIP2Q9Y608 721 aaKnown RBP28.66■■■□□ 2.18
TRIOBP-203ENST00000403663 ALDH1L1O75891 902 aa28.65■■■□□ 2.18
TRIOBP-203ENST00000403663 SMIM5Q71RC9 77 aa28.65■■■□□ 2.18
TRIOBP-203ENST00000403663 CCNL1Q9UK58 526 aaPredicted RBP28.65■■■□□ 2.18
TRIOBP-203ENST00000403663 DDX49Q9Y6V7 483 aaKnown RBP28.65■■■□□ 2.18
TRIOBP-203ENST00000403663 GNAI3P08754 354 aa28.65■■■□□ 2.18
TRIOBP-203ENST00000403663 IL6STP40189 918 aaPredicted RBP28.65■■■□□ 2.18
TRIOBP-203ENST00000403663 GNAI2P04899 355 aa28.64■■■□□ 2.18
TRIOBP-203ENST00000403663 UBTFL1P0CB47 393 aaPredicted RBP28.64■■■□□ 2.18
TRIOBP-203ENST00000403663 NEXNQ0ZGT2 675 aa28.64■■■□□ 2.18
TRIOBP-203ENST00000403663 TBC1D2BQ9UPU7 963 aa28.64■■■□□ 2.18
TRIOBP-203ENST00000403663 BAG4O95429 457 aaKnown RBP28.64■■■□□ 2.17
TRIOBP-203ENST00000403663 MSNP26038 577 aaKnown RBP28.64■■■□□ 2.17
TRIOBP-203ENST00000403663 TERF1P54274 439 aa28.64■■■□□ 2.17
TRIOBP-203ENST00000403663 EIF5P55010 431 aaKnown RBP28.64■■■□□ 2.17
TRIOBP-203ENST00000403663 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.64■■■□□ 2.17
TRIOBP-203ENST00000403663 JARID2Q92833 1246 aaPredicted RBP28.63■■■□□ 2.17
TRIOBP-203ENST00000403663 HLFQ16534 295 aa28.62■■■□□ 2.17
TRIOBP-203ENST00000403663 TBC1D9Q6ZT07 1266 aa28.62■■■□□ 2.17
TRIOBP-203ENST00000403663 ANKRD44Q8N8A2 993 aa28.62■■■□□ 2.17
TRIOBP-203ENST00000403663 LRRC4BQ9NT99 713 aa28.62■■■□□ 2.17
TRIOBP-203ENST00000403663 NUP98P52948 1817 aa28.62■■■□□ 2.17
TRIOBP-203ENST00000403663 GCKRQ14397 625 aa28.61■■■□□ 2.17
TRIOBP-203ENST00000403663 C9orf78Q9NZ63 289 aaPredicted RBP28.61■■■□□ 2.17
TRIOBP-203ENST00000403663 KIF6Q6ZMV9 814 aa28.61■■■□□ 2.17
TRIOBP-203ENST00000403663 MAP3K15Q6ZN16 1313 aa28.61■■■□□ 2.17
TRIOBP-203ENST00000403663 GRM8O00222 908 aa28.6■■■□□ 2.17
TRIOBP-203ENST00000403663 ZNF445P59923 1031 aa28.6■■■□□ 2.17
TRIOBP-203ENST00000403663 DZIP3Q86Y13 1208 aaKnown RBP28.6■■■□□ 2.17
TRIOBP-203ENST00000403663 AMIGO3Q86WK7 504 aa28.59■■■□□ 2.17
TRIOBP-203ENST00000403663 ANKRD45Q5TZF3 282 aa28.58■■■□□ 2.17
TRIOBP-203ENST00000403663 PNMA6EA0A0J9YXQ4 647 aa28.58■■■□□ 2.17
TRIOBP-203ENST00000403663 HS1BP3Q53T59 392 aa28.58■■■□□ 2.17
TRIOBP-203ENST00000403663 ILDR1Q86SU0 546 aaPredicted RBP28.57■■■□□ 2.16
TRIOBP-203ENST00000403663 RPAP2Q8IXW5 612 aaPredicted RBP28.57■■■□□ 2.16
TRIOBP-203ENST00000403663 CNTNAP4Q9C0A0 1308 aa28.57■■■□□ 2.16
TRIOBP-203ENST00000403663 KAZALD1Q96I82 304 aa28.57■■■□□ 2.16
TRIOBP-203ENST00000403663 UTYO14607 1347 aa28.56■■■□□ 2.16
TRIOBP-203ENST00000403663 C4BP0C0L5 1744 aa28.56■■■□□ 2.16
TRIOBP-203ENST00000403663 GCC1Q96CN9 775 aa28.56■■■□□ 2.16
TRIOBP-203ENST00000403663 ANKRD36CQ5JPF3 1778 aa28.56■■■□□ 2.16
TRIOBP-203ENST00000403663 COL15A1P39059 1388 aa28.56■■■□□ 2.16
TRIOBP-203ENST00000403663 TCIRG1Q13488 830 aa28.55■■■□□ 2.16
TRIOBP-203ENST00000403663 SUCLG2Q96I99 432 aa28.55■■■□□ 2.16
TRIOBP-203ENST00000403663 GIGYF2Q6Y7W6 1299 aaKnown RBP28.55■■■□□ 2.16
TRIOBP-203ENST00000403663 ISCA1Q9BUE6 129 aa28.54■■■□□ 2.16
TRIOBP-203ENST00000403663 PROM2Q8N271 834 aa28.54■■■□□ 2.16
TRIOBP-203ENST00000403663 A0A087WZG4 1122 aa28.53■■■□□ 2.16
TRIOBP-203ENST00000403663 GPTP24298 496 aa28.53■■■□□ 2.16
TRIOBP-203ENST00000403663 UBE3BQ7Z3V4 1068 aa28.53■■■□□ 2.16
TRIOBP-203ENST00000403663 TNS1Q9HBL0 1735 aaKnown RBP28.53■■■□□ 2.16
TRIOBP-203ENST00000403663 RBM10P98175 930 aaKnown RBP28.53■■■□□ 2.16
TRIOBP-203ENST00000403663 NOL7Q9UMY1 257 aaKnown RBP28.53■■■□□ 2.16
TRIOBP-203ENST00000403663 GNPATO15228 680 aa28.52■■■□□ 2.16
TRIOBP-203ENST00000403663 ZNF500O60304 480 aaPredicted RBP28.52■■■□□ 2.16
TRIOBP-203ENST00000403663 ATP8B2P98198 1209 aa28.52■■■□□ 2.16
TRIOBP-203ENST00000403663 ZSCAN23Q3MJ62 389 aa28.52■■■□□ 2.16
TRIOBP-203ENST00000403663 EPHA10Q5JZY3 1008 aa28.52■■■□□ 2.16
TRIOBP-203ENST00000403663 PDLIM2Q96JY6 352 aa28.52■■■□□ 2.16
TRIOBP-203ENST00000403663 CWC25Q9NXE8 425 aaPredicted RBP28.52■■■□□ 2.16
TRIOBP-203ENST00000403663 CAMTA2O94983 1202 aa28.51■■■□□ 2.15
TRIOBP-203ENST00000403663 CASP7P55210 303 aa28.51■■■□□ 2.15
TRIOBP-203ENST00000403663 RC3H1Q5TC82 1133 aaKnown RBP28.51■■■□□ 2.15
TRIOBP-203ENST00000403663 MCTP1Q6DN14 999 aa28.51■■■□□ 2.15
TRIOBP-203ENST00000403663 CAVIN1Q6NZI2 390 aaKnown RBP28.51■■■□□ 2.15
TRIOBP-203ENST00000403663 PPP1R42Q7Z4L9 355 aa28.51■■■□□ 2.15
TRIOBP-203ENST00000403663 R3HCC1Q9Y3T6 440 aaKnown RBP28.51■■■□□ 2.15
TRIOBP-203ENST00000403663 BCORQ6W2J9 1755 aa28.5■■■□□ 2.15
TRIOBP-203ENST00000403663 APBA3O96018 575 aa28.5■■■□□ 2.15
TRIOBP-203ENST00000403663 BICC1Q9H694 974 aaKnown RBP28.5■■■□□ 2.15
TRIOBP-203ENST00000403663 LMBRD1Q9NUN5 540 aa28.5■■■□□ 2.15
TRIOBP-203ENST00000403663 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.5■■■□□ 2.15
TRIOBP-203ENST00000403663 ERVV-1B6SEH8 477 aa28.49■■■□□ 2.15
TRIOBP-203ENST00000403663 CCDC191Q8NCU4 936 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms