RNA–Protein interactions for RNA: ENST00000403538.1

TPT1P4-201, Transcript of tumor protein, translationally-controlled 1 pseudogene 4, humanhuman

BASIC

Gene TPT1P4, Length 519 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1P4-201ENST00000403538 SIRT2Q8IXJ6 389 aa11.53□□□□□ -0.56
TPT1P4-201ENST00000403538 DCAF5Q96JK2 942 aa11.53□□□□□ -0.56
TPT1P4-201ENST00000403538 HYPKQ9NX55 129 aa11.53□□□□□ -0.56
TPT1P4-201ENST00000403538 RGPD5Q99666 1765 aa11.52□□□□□ -0.57
TPT1P4-201ENST00000403538 FKBP5Q13451 457 aaPredicted RBP11.52□□□□□ -0.57
TPT1P4-201ENST00000403538 TBC1D32Q96NH3 1257 aa11.52□□□□□ -0.57
TPT1P4-201ENST00000403538 OSBPL3Q9H4L5 887 aa11.52□□□□□ -0.57
TPT1P4-201ENST00000403538 ERBB4Q15303 1308 aa11.52□□□□□ -0.57
TPT1P4-201ENST00000403538 NHSL1Q5SYE7 1610 aa11.51□□□□□ -0.57
TPT1P4-201ENST00000403538 EPB41L2O43491 1005 aaKnown RBP11.51□□□□□ -0.57
TPT1P4-201ENST00000403538 GIGYF1O75420 1035 aaPredicted RBP11.51□□□□□ -0.57
TPT1P4-201ENST00000403538 PPP4CP60510 307 aa11.51□□□□□ -0.57
TPT1P4-201ENST00000403538 ATP8B2P98198 1209 aa11.51□□□□□ -0.57
TPT1P4-201ENST00000403538 HSP90AB4PQ58FF6 505 aa11.51□□□□□ -0.57
TPT1P4-201ENST00000403538 ANKRD45Q5TZF3 282 aa11.51□□□□□ -0.57
TPT1P4-201ENST00000403538 SRCIN1Q9C0H9 1055 aa11.51□□□□□ -0.57
TPT1P4-201ENST00000403538 WDR17Q8IZU2 1322 aa11.51□□□□□ -0.57
TPT1P4-201ENST00000403538 RAB11FIP3O75154 756 aa11.5□□□□□ -0.57
TPT1P4-201ENST00000403538 DDX58O95786 925 aaKnown RBP11.5□□□□□ -0.57
TPT1P4-201ENST00000403538 PHKG2P15735 406 aa11.5□□□□□ -0.57
TPT1P4-201ENST00000403538 KRT24Q2M2I5 525 aa11.5□□□□□ -0.57
TPT1P4-201ENST00000403538 LRRC59Q96AG4 307 aaKnown RBP11.5□□□□□ -0.57
TPT1P4-201ENST00000403538 SLC52A2Q9HAB3 445 aa11.5□□□□□ -0.57
TPT1P4-201ENST00000403538 LGR6Q9HBX8 967 aa11.5□□□□□ -0.57
TPT1P4-201ENST00000403538 MIS18AQ9NYP9 233 aa11.5□□□□□ -0.57
TPT1P4-201ENST00000403538 AOX1Q06278 1338 aa11.5□□□□□ -0.57
TPT1P4-201ENST00000403538 ERVV-2B6SEH9 535 aa11.49□□□□□ -0.57
TPT1P4-201ENST00000403538 RBM25P49756 843 aaKnown RBP11.49□□□□□ -0.57
TPT1P4-201ENST00000403538 HSPA2P54652 639 aa11.49□□□□□ -0.57
TPT1P4-201ENST00000403538 XPCQ01831 940 aaPredicted RBP11.49□□□□□ -0.57
TPT1P4-201ENST00000403538 MTX1Q13505 466 aa11.49□□□□□ -0.57
TPT1P4-201ENST00000403538 USHBP1Q8N6Y0 703 aa11.49□□□□□ -0.57
TPT1P4-201ENST00000403538 CARD10Q9BWT7 1032 aa11.49□□□□□ -0.57
TPT1P4-201ENST00000403538 DDX21Q9NR30 783 aaKnown RBP eCLIP11.49□□□□□ -0.57
TPT1P4-201ENST00000403538 NLRP2Q9NX02 1062 aa11.49□□□□□ -0.57
TPT1P4-201ENST00000403538 ZC3H6P61129 1189 aaKnown RBP11.48□□□□□ -0.57
TPT1P4-201ENST00000403538 PPP1R18Q6NYC8 613 aa11.48□□□□□ -0.57
TPT1P4-201ENST00000403538 ZNF790Q6PG37 636 aa11.48□□□□□ -0.57
TPT1P4-201ENST00000403538 PACS2Q86VP3 889 aa11.48□□□□□ -0.57
TPT1P4-201ENST00000403538 DNAAF4Q8WXU2 420 aa11.48□□□□□ -0.57
TPT1P4-201ENST00000403538 COL15A1P39059 1388 aa11.47□□□□□ -0.57
TPT1P4-201ENST00000403538 PCDH11XQ9BZA7 1347 aa11.47□□□□□ -0.57
TPT1P4-201ENST00000403538 PCDH11YQ9BZA8 1340 aa11.47□□□□□ -0.57
TPT1P4-201ENST00000403538 UBTFL1P0CB47 393 aaPredicted RBP11.47□□□□□ -0.57
TPT1P4-201ENST00000403538 CSB-PGBD3P0DP91 1061 aa11.47□□□□□ -0.57
TPT1P4-201ENST00000403538 CASC1Q6TDU7 716 aa11.47□□□□□ -0.57
TPT1P4-201ENST00000403538 KSR2Q6VAB6 950 aa11.47□□□□□ -0.57
TPT1P4-201ENST00000403538 MPRIPQ6WCQ1 1025 aa11.47□□□□□ -0.57
TPT1P4-201ENST00000403538 G2E3Q7L622 706 aa11.47□□□□□ -0.57
TPT1P4-201ENST00000403538 PLEKHM2Q8IWE5 1019 aa11.47□□□□□ -0.57
TPT1P4-201ENST00000403538 SSH3Q8TE77 659 aa11.47□□□□□ -0.57
TPT1P4-201ENST00000403538 MEIS3Q99687 375 aa11.47□□□□□ -0.57
TPT1P4-201ENST00000403538 LNPKQ9C0E8 428 aa11.47□□□□□ -0.57
TPT1P4-201ENST00000403538 USP44Q9H0E7 712 aa11.47□□□□□ -0.57
TPT1P4-201ENST00000403538 IL21Q9HBE4 155 aa11.47□□□□□ -0.57
TPT1P4-201ENST00000403538 UTYO14607 1347 aa11.46□□□□□ -0.57
TPT1P4-201ENST00000403538 CDC45O75419 566 aa11.46□□□□□ -0.57
TPT1P4-201ENST00000403538 SNRPA1P09661 255 aaKnown RBP11.46□□□□□ -0.57
TPT1P4-201ENST00000403538 BEND3Q5T5X7 828 aa11.46□□□□□ -0.57
TPT1P4-201ENST00000403538 NPM2Q86SE8 214 aaKnown RBP11.46□□□□□ -0.57
TPT1P4-201ENST00000403538 SKAP1Q86WV1 359 aa11.46□□□□□ -0.57
TPT1P4-201ENST00000403538 PRDM11Q9NQV5 511 aa11.46□□□□□ -0.57
TPT1P4-201ENST00000403538 TTC22Q5TAA0 569 aa11.45□□□□□ -0.58
TPT1P4-201ENST00000403538 LARP1Q6PKG0 1096 aaKnown RBP11.45□□□□□ -0.58
TPT1P4-201ENST00000403538 SLC4A10Q6U841 1118 aa11.45□□□□□ -0.58
TPT1P4-201ENST00000403538 LINS1Q8NG48 757 aa11.45□□□□□ -0.58
TPT1P4-201ENST00000403538 SNX21Q969T3 373 aa11.45□□□□□ -0.58
TPT1P4-201ENST00000403538 ZNF775Q96BV0 537 aaPredicted RBP11.45□□□□□ -0.58
TPT1P4-201ENST00000403538 FMNL2Q96PY5 1086 aa11.45□□□□□ -0.58
TPT1P4-201ENST00000403538 C22orf23Q9BZE7 217 aa11.45□□□□□ -0.58
TPT1P4-201ENST00000403538 STAP2Q9UGK3 403 aa11.45□□□□□ -0.58
TPT1P4-201ENST00000403538 COL5A2P05997 1499 aaPredicted RBP11.44□□□□□ -0.58
TPT1P4-201ENST00000403538 KDM6AO15550 1401 aaPredicted RBP11.44□□□□□ -0.58
TPT1P4-201ENST00000403538 ABCA3Q99758 1704 aa11.44□□□□□ -0.58
TPT1P4-201ENST00000403538 ZNF335Q9H4Z2 1342 aaPredicted RBP11.44□□□□□ -0.58
TPT1P4-201ENST00000403538 ZBTB7CA1YPR0 619 aa11.44□□□□□ -0.58
TPT1P4-201ENST00000403538 TICAM2Q86XR7 235 aa11.44□□□□□ -0.58
TPT1P4-201ENST00000403538 TTC5Q8N0Z6 440 aa11.44□□□□□ -0.58
TPT1P4-201ENST00000403538 LRRCC1Q9C099 1032 aa11.44□□□□□ -0.58
TPT1P4-201ENST00000403538 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.44□□□□□ -0.58
TPT1P4-201ENST00000403538 AHDC1Q5TGY3 1603 aaPredicted RBP11.44□□□□□ -0.58
TPT1P4-201ENST00000403538 COL22A1Q8NFW1 1626 aaPredicted RBP11.44□□□□□ -0.58
TPT1P4-201ENST00000403538 MEGF6O75095 1541 aa11.44□□□□□ -0.58
TPT1P4-201ENST00000403538 CAMK2BQ13554 666 aa11.43□□□□□ -0.58
TPT1P4-201ENST00000403538 ERC1Q8IUD2 1116 aa11.43□□□□□ -0.58
TPT1P4-201ENST00000403538 ZCRB1Q8TBF4 217 aaKnown RBP11.43□□□□□ -0.58
TPT1P4-201ENST00000403538 MTRQ99707 1265 aa11.43□□□□□ -0.58
TPT1P4-201ENST00000403538 CDCA7Q9BWT1 371 aaPredicted RBP11.43□□□□□ -0.58
TPT1P4-201ENST00000403538 TEX13AQ9BXU3 409 aaPredicted RBP11.43□□□□□ -0.58
TPT1P4-201ENST00000403538 C1orf115Q9H7X2 142 aa11.43□□□□□ -0.58
TPT1P4-201ENST00000403538 CHPF2Q9P2E5 772 aa11.43□□□□□ -0.58
TPT1P4-201ENST00000403538 TSKSQ9UJT2 592 aa11.43□□□□□ -0.58
TPT1P4-201ENST00000403538 PI4KAP2A4QPH2 592 aa11.42□□□□□ -0.58
TPT1P4-201ENST00000403538 F6X3S4 739 aa11.42□□□□□ -0.58
TPT1P4-201ENST00000403538 IL2RBP14784 551 aa11.42□□□□□ -0.58
TPT1P4-201ENST00000403538 NEXNQ0ZGT2 675 aa11.42□□□□□ -0.58
TPT1P4-201ENST00000403538 PI4KAP1Q8N8J0 262 aa11.42□□□□□ -0.58
TPT1P4-201ENST00000403538 COL14A1Q05707 1796 aaKnown RBP11.41□□□□□ -0.58
TPT1P4-201ENST00000403538 CYP27B1O15528 508 aa11.41□□□□□ -0.58
TPT1P4-201ENST00000403538 REC8O95072 547 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms