RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 ZNF772Q68DY9 489 aaPredicted RBP16.38■□□□□ 0.21
CEACAM1-206ENST00000403136 ZBTB38Q8NAP3 1195 aaPredicted RBP16.38■□□□□ 0.21
CEACAM1-206ENST00000403136 GPTP24298 496 aa16.37■□□□□ 0.21
CEACAM1-206ENST00000403136 KCNQ4P56696 695 aa16.37■□□□□ 0.21
CEACAM1-206ENST00000403136 AFDNP55196 1824 aaKnown RBP16.37■□□□□ 0.21
CEACAM1-206ENST00000403136 SASH1O94885 1247 aa16.36■□□□□ 0.21
CEACAM1-206ENST00000403136 PTPN12Q05209 780 aaKnown RBP16.36■□□□□ 0.21
CEACAM1-206ENST00000403136 RC3H1Q5TC82 1133 aaKnown RBP16.36■□□□□ 0.21
CEACAM1-206ENST00000403136 NUTM1Q86Y26 1132 aa16.36■□□□□ 0.21
CEACAM1-206ENST00000403136 ZNF34Q8IZ26 560 aa16.36■□□□□ 0.21
CEACAM1-206ENST00000403136 CLASRPQ8N2M8 674 aaKnown RBP16.36■□□□□ 0.21
CEACAM1-206ENST00000403136 KLHDC4Q8TBB5 520 aa16.36■□□□□ 0.21
CEACAM1-206ENST00000403136 FAM89AQ96GI7 184 aa16.36■□□□□ 0.21
CEACAM1-206ENST00000403136 BCL11BQ9C0K0 894 aaPredicted RBP16.36■□□□□ 0.21
CEACAM1-206ENST00000403136 CAMTA2O94983 1202 aa16.36■□□□□ 0.21
CEACAM1-206ENST00000403136 SDSP20132 328 aa16.36■□□□□ 0.21
CEACAM1-206ENST00000403136 KRT27Q7Z3Y8 459 aa16.36■□□□□ 0.21
CEACAM1-206ENST00000403136 PLA2G12BQ9BX93 195 aa16.36■□□□□ 0.21
CEACAM1-206ENST00000403136 SIL1Q9H173 461 aa16.36■□□□□ 0.21
CEACAM1-206ENST00000403136 UPF2Q9HAU5 1272 aaKnown RBP16.36■□□□□ 0.21
CEACAM1-206ENST00000403136 CNTNAP4Q9C0A0 1308 aa16.35■□□□□ 0.21
CEACAM1-206ENST00000403136 CICQ96RK0 1608 aaPredicted RBP16.35■□□□□ 0.21
CEACAM1-206ENST00000403136 RBM6P78332 1123 aaKnown RBP16.35■□□□□ 0.21
CEACAM1-206ENST00000403136 FAM196AQ6ZSG2 479 aa16.35■□□□□ 0.21
CEACAM1-206ENST00000403136 CCNL1Q9UK58 526 aaPredicted RBP16.35■□□□□ 0.21
CEACAM1-206ENST00000403136 CDC45O75419 566 aa16.34■□□□□ 0.21
CEACAM1-206ENST00000403136 CHMP3Q9Y3E7 222 aa16.34■□□□□ 0.21
CEACAM1-206ENST00000403136 AOX1Q06278 1338 aa16.34■□□□□ 0.21
CEACAM1-206ENST00000403136 TSHZ3Q63HK5 1081 aa16.33■□□□□ 0.21
CEACAM1-206ENST00000403136 TBC1D9Q6ZT07 1266 aa16.33■□□□□ 0.21
CEACAM1-206ENST00000403136 TRMT112Q9UI30 125 aaKnown RBP16.33■□□□□ 0.21
CEACAM1-206ENST00000403136 CDHR2Q9BYE9 1310 aa16.33■□□□□ 0.21
CEACAM1-206ENST00000403136 ZNF831Q5JPB2 1677 aa16.33■□□□□ 0.21
CEACAM1-206ENST00000403136 MYH14Q7Z406 1995 aaKnown RBP16.33■□□□□ 0.2
CEACAM1-206ENST00000403136 IPO9Q96P70 1041 aaKnown RBP16.33■□□□□ 0.2
CEACAM1-206ENST00000403136 NHSQ6T4R5 1651 aa16.33■□□□□ 0.2
CEACAM1-206ENST00000403136 RPS6KA4O75676 772 aa16.32■□□□□ 0.2
CEACAM1-206ENST00000403136 CSF1RP07333 972 aa16.32■□□□□ 0.2
CEACAM1-206ENST00000403136 MFAP1P55081 439 aaKnown RBP16.32■□□□□ 0.2
CEACAM1-206ENST00000403136 SYNE4Q8N205 404 aa16.32■□□□□ 0.2
CEACAM1-206ENST00000403136 UBN2Q6ZU65 1347 aa16.32■□□□□ 0.2
CEACAM1-206ENST00000403136 RREB1Q92766 1687 aa16.32■□□□□ 0.2
CEACAM1-206ENST00000403136 IFIT2P09913 472 aaKnown RBP16.31■□□□□ 0.2
CEACAM1-206ENST00000403136 CLEC4GQ6UXB4 293 aa16.31■□□□□ 0.2
CEACAM1-206ENST00000403136 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.31■□□□□ 0.2
CEACAM1-206ENST00000403136 USP42Q9H9J4 1324 aaKnown RBP16.31■□□□□ 0.2
CEACAM1-206ENST00000403136 BTAF1O14981 1849 aa16.31■□□□□ 0.2
CEACAM1-206ENST00000403136 IRS4O14654 1257 aaPredicted RBP16.31■□□□□ 0.2
CEACAM1-206ENST00000403136 PARP10Q53GL7 1025 aa16.31■□□□□ 0.2
CEACAM1-206ENST00000403136 SUSD4Q5VX71 490 aa16.31■□□□□ 0.2
CEACAM1-206ENST00000403136 AACSQ86V21 672 aa16.31■□□□□ 0.2
CEACAM1-206ENST00000403136 PI4K2BQ8TCG2 481 aa16.31■□□□□ 0.2
CEACAM1-206ENST00000403136 EAF2Q96CJ1 260 aaPredicted RBP16.31■□□□□ 0.2
CEACAM1-206ENST00000403136 TBC1D32Q96NH3 1257 aa16.31■□□□□ 0.2
CEACAM1-206ENST00000403136 ZNF652Q9Y2D9 606 aa16.31■□□□□ 0.2
CEACAM1-206ENST00000403136 TTC41PQ6P2S7 1318 aa16.3■□□□□ 0.2
CEACAM1-206ENST00000403136 EIF5BO60841 1220 aaKnown RBP16.3■□□□□ 0.2
CEACAM1-206ENST00000403136 CCDC57Q2TAC2 916 aa16.3■□□□□ 0.2
CEACAM1-206ENST00000403136 RGL2O15211 777 aa16.29■□□□□ 0.2
CEACAM1-206ENST00000403136 TFCP2Q12800 502 aa16.29■□□□□ 0.2
CEACAM1-206ENST00000403136 UTP14AQ9BVJ6 771 aaKnown RBP16.29■□□□□ 0.2
CEACAM1-206ENST00000403136 ECHDC1Q9NTX5 307 aa16.29■□□□□ 0.2
CEACAM1-206ENST00000403136 PDE8AO60658 829 aa16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 CASC1Q6TDU7 716 aa16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 ATG9AQ7Z3C6 839 aa16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 TTLL11Q8NHH1 800 aa16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 C22orf23Q9BZE7 217 aa16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 CCDC8Q9H0W5 538 aaPredicted RBP16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 NIP7Q9Y221 180 aaKnown RBP eCLIP16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 COL5A3P25940 1745 aaPredicted RBP16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 NUP98P52948 1817 aa16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 TRIM6-TRIM34B2RNG4 842 aa16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 EYA2O00167 538 aa16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 ERC2O15083 957 aa16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 GNPATO15228 680 aa16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 GLRX3O76003 335 aaKnown RBP16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 TRIM37O94972 964 aa16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 IL15P40933 162 aaPredicted RBP16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 RILPL2Q969X0 211 aa16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 DDRGK1Q96HY6 314 aa16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 GPATCH3Q96I76 525 aa16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 ZNF594Q96JF6 807 aaPredicted RBP16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 AK7Q96M32 723 aa16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 RTCBQ9Y3I0 505 aaKnown RBP16.28■□□□□ 0.2
CEACAM1-206ENST00000403136 SH3TC1Q8TE82 1336 aa16.27■□□□□ 0.2
CEACAM1-206ENST00000403136 CIAO1O76071 339 aa16.27■□□□□ 0.2
CEACAM1-206ENST00000403136 RXRBP28702 533 aa16.27■□□□□ 0.2
CEACAM1-206ENST00000403136 CTSWP56202 376 aa16.27■□□□□ 0.2
CEACAM1-206ENST00000403136 IFIT5Q13325 482 aaKnown RBP16.27■□□□□ 0.2
CEACAM1-206ENST00000403136 SMIM5Q71RC9 77 aa16.27■□□□□ 0.2
CEACAM1-206ENST00000403136 NARFQ9UHQ1 456 aa16.27■□□□□ 0.2
CEACAM1-206ENST00000403136 FBXO3Q9UK99 471 aa16.27■□□□□ 0.2
CEACAM1-206ENST00000403136 SBF2Q86WG5 1849 aa16.27■□□□□ 0.2
CEACAM1-206ENST00000403136 TNNI3KQ59H18 835 aa16.26■□□□□ 0.19
CEACAM1-206ENST00000403136 CCDC85AQ96PX6 553 aaPredicted RBP16.26■□□□□ 0.19
CEACAM1-206ENST00000403136 LRRC4BQ9NT99 713 aa16.26■□□□□ 0.19
CEACAM1-206ENST00000403136 FPGT-TNNI3KV9GXZ4 949 aa16.26■□□□□ 0.19
CEACAM1-206ENST00000403136 FAM177BA6PVY3 158 aa16.26■□□□□ 0.19
CEACAM1-206ENST00000403136 MSH5O43196 834 aa16.26■□□□□ 0.19
CEACAM1-206ENST00000403136 LRRC24Q50LG9 513 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms