RNA–Protein interactions for RNA: ENST00000401533.6

GAREM2-201, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAREM2, Length 4,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-201ENST00000401533 FILIP1Q7Z7B0 1213 aa21.92■■□□□ 1.1
GAREM2-201ENST00000401533 LETM1O95202 739 aaPredicted RBP21.91■■□□□ 1.1
GAREM2-201ENST00000401533 ADAMTS2O95450 1211 aa21.91■■□□□ 1.1
GAREM2-201ENST00000401533 CCAR2Q8N163 923 aaKnown RBP21.91■■□□□ 1.1
GAREM2-201ENST00000401533 NLRP1Q9C000 1473 aa21.91■■□□□ 1.1
GAREM2-201ENST00000401533 RAD21O60216 631 aa21.91■■□□□ 1.1
GAREM2-201ENST00000401533 ALDH1L1O75891 902 aa21.91■■□□□ 1.1
GAREM2-201ENST00000401533 SIRT1Q96EB6 747 aa21.91■■□□□ 1.1
GAREM2-201ENST00000401533 PROSER3Q2NL68 480 aa21.91■■□□□ 1.1
GAREM2-201ENST00000401533 SH2B1Q9NRF2 756 aaPredicted RBP21.91■■□□□ 1.1
GAREM2-201ENST00000401533 ABCF2Q9UG63 623 aa21.91■■□□□ 1.1
GAREM2-201ENST00000401533 ZSCAN22P10073 491 aaPredicted RBP21.9■■□□□ 1.1
GAREM2-201ENST00000401533 CDK11BP21127 795 aaKnown RBP21.9■■□□□ 1.1
GAREM2-201ENST00000401533 TIMM10P62072 90 aa21.9■■□□□ 1.1
GAREM2-201ENST00000401533 CCDC183Q5T5S1 534 aa21.9■■□□□ 1.1
GAREM2-201ENST00000401533 NUP133Q8WUM0 1156 aa21.9■■□□□ 1.1
GAREM2-201ENST00000401533 DLC1Q96QB1 1528 aa21.89■■□□□ 1.1
GAREM2-201ENST00000401533 TFCP2Q12800 502 aa21.89■■□□□ 1.1
GAREM2-201ENST00000401533 MAP3K11Q16584 847 aa21.89■■□□□ 1.1
GAREM2-201ENST00000401533 ZNF790Q6PG37 636 aa21.89■■□□□ 1.1
GAREM2-201ENST00000401533 GAS2L3Q86XJ1 694 aa21.89■■□□□ 1.1
GAREM2-201ENST00000401533 SUCLG2Q96I99 432 aa21.89■■□□□ 1.1
GAREM2-201ENST00000401533 ANAPC15P60006 121 aa21.89■■□□□ 1.09
GAREM2-201ENST00000401533 IFIT5Q13325 482 aaKnown RBP21.89■■□□□ 1.09
GAREM2-201ENST00000401533 HOMER1Q86YM7 354 aa21.89■■□□□ 1.09
GAREM2-201ENST00000401533 PIBF1Q8WXW3 757 aa21.89■■□□□ 1.09
GAREM2-201ENST00000401533 FAM135BQ49AJ0 1406 aa21.89■■□□□ 1.09
GAREM2-201ENST00000401533 COL3A1P02461 1466 aaPredicted RBP21.89■■□□□ 1.09
GAREM2-201ENST00000401533 SAFBQ15424 915 aaKnown RBP eCLIP21.89■■□□□ 1.09
GAREM2-201ENST00000401533 CCDC129Q6ZRS4 1044 aa21.89■■□□□ 1.09
GAREM2-201ENST00000401533 ZNF496Q96IT1 587 aaPredicted RBP21.89■■□□□ 1.09
GAREM2-201ENST00000401533 DDX21Q9NR30 783 aaKnown RBP eCLIP21.89■■□□□ 1.09
GAREM2-201ENST00000401533 SMC2O95347 1197 aa21.88■■□□□ 1.09
GAREM2-201ENST00000401533 TPD52L1Q16890 204 aaPredicted RBP21.88■■□□□ 1.09
GAREM2-201ENST00000401533 NEK1Q96PY6 1258 aa21.88■■□□□ 1.09
GAREM2-201ENST00000401533 CWC25Q9NXE8 425 aaPredicted RBP21.88■■□□□ 1.09
GAREM2-201ENST00000401533 TRMT112Q9UI30 125 aaKnown RBP21.88■■□□□ 1.09
GAREM2-201ENST00000401533 KIAA0232Q92628 1395 aa21.88■■□□□ 1.09
GAREM2-201ENST00000401533 LDHAL6AQ6ZMR3 332 aa21.88■■□□□ 1.09
GAREM2-201ENST00000401533 REREQ9P2R6 1566 aa21.88■■□□□ 1.09
GAREM2-201ENST00000401533 AATKQ6ZMQ8 1374 aa21.88■■□□□ 1.09
GAREM2-201ENST00000401533 STARD3NLO95772 234 aa21.88■■□□□ 1.09
GAREM2-201ENST00000401533 CCDC144CPQ8IYA2 1237 aa21.88■■□□□ 1.09
GAREM2-201ENST00000401533 CCDC34Q96HJ3 373 aa21.88■■□□□ 1.09
GAREM2-201ENST00000401533 SYT1P21579 422 aa21.87■■□□□ 1.09
GAREM2-201ENST00000401533 C19orf44Q9H6X5 657 aa21.87■■□□□ 1.09
GAREM2-201ENST00000401533 U3KPZ7 1027 aaPredicted RBP21.87■■□□□ 1.09
GAREM2-201ENST00000401533 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.87■■□□□ 1.09
GAREM2-201ENST00000401533 LRSAM1Q6UWE0 723 aa21.86■■□□□ 1.09
GAREM2-201ENST00000401533 RBSNQ9H1K0 784 aa21.86■■□□□ 1.09
GAREM2-201ENST00000401533 CPSF1Q10570 1443 aaKnown RBP21.86■■□□□ 1.09
GAREM2-201ENST00000401533 CREB3L3Q68CJ9 461 aa21.86■■□□□ 1.09
GAREM2-201ENST00000401533 ZNF396Q96N95 335 aaPredicted RBP21.86■■□□□ 1.09
GAREM2-201ENST00000401533 CADPS2Q86UW7 1296 aa21.86■■□□□ 1.09
GAREM2-201ENST00000401533 ZCRB1Q8TBF4 217 aaKnown RBP21.85■■□□□ 1.09
GAREM2-201ENST00000401533 SNX14Q9Y5W7 946 aa21.85■■□□□ 1.09
GAREM2-201ENST00000401533 SGSM2O43147 1006 aa21.85■■□□□ 1.09
GAREM2-201ENST00000401533 USP16Q9Y5T5 823 aa21.85■■□□□ 1.09
GAREM2-201ENST00000401533 DHX16O60231 1041 aaKnown RBP21.85■■□□□ 1.09
GAREM2-201ENST00000401533 IMMTQ16891 758 aaKnown RBP21.85■■□□□ 1.09
GAREM2-201ENST00000401533 UQCRHLA0A096LP55 91 aa21.84■■□□□ 1.09
GAREM2-201ENST00000401533 POLR3DP05423 398 aaPredicted RBP21.84■■□□□ 1.09
GAREM2-201ENST00000401533 UQCRHP07919 91 aa21.84■■□□□ 1.09
GAREM2-201ENST00000401533 A1BGP04217 495 aa21.84■■□□□ 1.09
GAREM2-201ENST00000401533 DBNDD2Q9BQY9 259 aa21.84■■□□□ 1.09
GAREM2-201ENST00000401533 G3V3G9 751 aa21.84■■□□□ 1.09
GAREM2-201ENST00000401533 ADCY5O95622 1261 aa21.84■■□□□ 1.09
GAREM2-201ENST00000401533 DCAF8Q5TAQ9 597 aa21.84■■□□□ 1.09
GAREM2-201ENST00000401533 CFAP45Q9UL16 551 aa21.84■■□□□ 1.09
GAREM2-201ENST00000401533 GADD45BO75293 160 aaPredicted RBP21.84■■□□□ 1.09
GAREM2-201ENST00000401533 BRPF1P55201 1214 aaPredicted RBP21.84■■□□□ 1.09
GAREM2-201ENST00000401533 ZNF594Q96JF6 807 aaPredicted RBP21.84■■□□□ 1.09
GAREM2-201ENST00000401533 IQSEC3Q9UPP2 1182 aaPredicted RBP21.83■■□□□ 1.09
GAREM2-201ENST00000401533 USP6P35125 1406 aa21.83■■□□□ 1.09
GAREM2-201ENST00000401533 TDO2P48775 406 aa21.83■■□□□ 1.09
GAREM2-201ENST00000401533 LRP2BPQ9P2M1 347 aa21.83■■□□□ 1.09
GAREM2-201ENST00000401533 GIGYF1O75420 1035 aaPredicted RBP21.83■■□□□ 1.08
GAREM2-201ENST00000401533 PIP4K2BP78356 416 aa21.83■■□□□ 1.08
GAREM2-201ENST00000401533 PDILTQ8N807 584 aa21.83■■□□□ 1.08
GAREM2-201ENST00000401533 AIDAQ96BJ3 306 aa21.83■■□□□ 1.08
GAREM2-201ENST00000401533 F13A1P00488 732 aa21.82■■□□□ 1.08
GAREM2-201ENST00000401533 HELBQ8NG08 1087 aaPredicted RBP21.82■■□□□ 1.08
GAREM2-201ENST00000401533 IGSF1Q8N6C5 1336 aa21.82■■□□□ 1.08
GAREM2-201ENST00000401533 ARHGEF10O15013 1369 aa21.82■■□□□ 1.08
GAREM2-201ENST00000401533 UBE2HP62256 183 aa21.82■■□□□ 1.08
GAREM2-201ENST00000401533 SSH3Q8TE77 659 aa21.82■■□□□ 1.08
GAREM2-201ENST00000401533 SCAND2PQ9GZW5 306 aaPredicted RBP21.82■■□□□ 1.08
GAREM2-201ENST00000401533 CTNNA3Q9UI47 895 aa21.82■■□□□ 1.08
GAREM2-201ENST00000401533 ISM2Q6H9L7 571 aa21.82■■□□□ 1.08
GAREM2-201ENST00000401533 Q6ZUG5 572 aa21.82■■□□□ 1.08
GAREM2-201ENST00000401533 LMBRD1Q9NUN5 540 aa21.82■■□□□ 1.08
GAREM2-201ENST00000401533 LRRC7Q96NW7 1537 aa21.81■■□□□ 1.08
GAREM2-201ENST00000401533 BIN1O00499 593 aa21.81■■□□□ 1.08
GAREM2-201ENST00000401533 TTC12Q9H892 705 aaPredicted RBP21.81■■□□□ 1.08
GAREM2-201ENST00000401533 MINDY4BA8MYZ0 360 aa21.8■■□□□ 1.08
GAREM2-201ENST00000401533 SETD1BQ9UPS6 1966 aaKnown RBP21.8■■□□□ 1.08
GAREM2-201ENST00000401533 PLEKHG1Q9ULL1 1385 aa21.8■■□□□ 1.08
GAREM2-201ENST00000401533 TTC41PQ6P2S7 1318 aa21.8■■□□□ 1.08
GAREM2-201ENST00000401533 PTH1RQ03431 593 aa21.8■■□□□ 1.08
GAREM2-201ENST00000401533 EAF2Q96CJ1 260 aaPredicted RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms