RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 N4BP3O15049 544 aa11□□□□□ -0.65
CSMD1-202ENST00000400186 IFIT1P09914 478 aaKnown RBP11□□□□□ -0.65
CSMD1-202ENST00000400186 KIAA0753Q2KHM9 967 aa11□□□□□ -0.65
CSMD1-202ENST00000400186 SYCP3Q8IZU3 236 aa11□□□□□ -0.65
CSMD1-202ENST00000400186 ACTN2P35609 894 aa11□□□□□ -0.65
CSMD1-202ENST00000400186 NLRP5P59047 1200 aa11□□□□□ -0.65
CSMD1-202ENST00000400186 KLHL40Q2TBA0 621 aa11□□□□□ -0.65
CSMD1-202ENST00000400186 RNF216Q9NWF9 866 aaPredicted RBP11□□□□□ -0.65
CSMD1-202ENST00000400186 CCDC102BQ68D86 513 aa11□□□□□ -0.65
CSMD1-202ENST00000400186 ZNF213O14771 459 aa11□□□□□ -0.65
CSMD1-202ENST00000400186 STMN4Q9H169 189 aaPredicted RBP11□□□□□ -0.65
CSMD1-202ENST00000400186 CHMP4BP1P59074 171 aa11□□□□□ -0.65
CSMD1-202ENST00000400186 IQCGQ9H095 443 aaKnown RBP11□□□□□ -0.65
CSMD1-202ENST00000400186 PUF60Q9UHX1 559 aaKnown RBP11□□□□□ -0.65
CSMD1-202ENST00000400186 AKR1B10O60218 316 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 TFIP11Q9UBB9 837 aaKnown RBP10.99□□□□□ -0.65
CSMD1-202ENST00000400186 SYKP43405 635 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 MXRA7P84157 204 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 BICDL1Q6ZP65 573 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 MICU3Q86XE3 530 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 STXBP4Q6ZWJ1 553 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 HMG20BQ9P0W2 317 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 CCDC172P0C7W6 258 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 SKILP12757 684 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 TRIM47Q96LD4 638 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 ZMYND15Q9H091 742 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 UBASH3AP57075 661 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 EVI5LQ96CN4 794 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 CCDC144CPQ8IYA2 1237 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 UBA7P41226 1012 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 BMP2KLQ5H9B9 411 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 CTAGE1Q96RT6 745 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 LARP6Q9BRS8 491 aaKnown RBP10.99□□□□□ -0.65
CSMD1-202ENST00000400186 CCDC184Q52MB2 194 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 CCDC121Q6ZUS5 278 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 DAAM2Q86T65 1068 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 RMND1Q9NWS8 449 aa10.99□□□□□ -0.65
CSMD1-202ENST00000400186 TMEM67Q5HYA8 995 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 DCAF8L1A6NGE4 600 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 AFAP1Q8N556 730 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 DRC1Q96MC2 740 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.98□□□□□ -0.65
CSMD1-202ENST00000400186 IDEP14735 1019 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 ISM2Q6H9L7 571 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 TBC1D32Q96NH3 1257 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 CCDC160A6NGH7 325 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 ANO6Q4KMQ2 910 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 SELENOOQ9BVL4 669 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 PTPRCP08575 1304 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 PRC1O43663 620 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 OPA1O60313 960 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 SKAP1Q86WV1 359 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 GOLGA1Q92805 767 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 PANK2Q9BZ23 570 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 LRSAM1Q6UWE0 723 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 OSCARQ8IYS5 282 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 SYNCQ9H7C4 482 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 GIMAP6Q6P9H5 292 aa10.98□□□□□ -0.65
CSMD1-202ENST00000400186 USP16Q9Y5T5 823 aa10.97□□□□□ -0.65
CSMD1-202ENST00000400186 ITSN2Q9NZM3 1697 aa10.97□□□□□ -0.65
CSMD1-202ENST00000400186 METAP2P50579 478 aaKnown RBP eCLIP10.97□□□□□ -0.65
CSMD1-202ENST00000400186 ZSCAN16Q9H4T2 348 aaPredicted RBP10.97□□□□□ -0.65
CSMD1-202ENST00000400186 CTAGE15A4D2H0 777 aa10.97□□□□□ -0.65
CSMD1-202ENST00000400186 CTAGE8P0CG41 777 aa10.97□□□□□ -0.65
CSMD1-202ENST00000400186 PPM1FP49593 454 aaPredicted RBP10.97□□□□□ -0.65
CSMD1-202ENST00000400186 CTAGE6Q86UF2 777 aa10.97□□□□□ -0.65
CSMD1-202ENST00000400186 CTAGE4Q8IX94 777 aa10.97□□□□□ -0.65
CSMD1-202ENST00000400186 TRIM27P14373 513 aa10.97□□□□□ -0.65
CSMD1-202ENST00000400186 ZNF444Q8N0Y2 327 aaPredicted RBP10.97□□□□□ -0.65
CSMD1-202ENST00000400186 UBE2Q2Q8WVN8 375 aa10.97□□□□□ -0.65
CSMD1-202ENST00000400186 ATRIPQ8WXE1 791 aa10.97□□□□□ -0.65
CSMD1-202ENST00000400186 AK9Q5TCS8 1911 aa10.97□□□□□ -0.65
CSMD1-202ENST00000400186 SLF2Q8IX21 1173 aa10.97□□□□□ -0.65
CSMD1-202ENST00000400186 MYD88Q99836 296 aa10.97□□□□□ -0.65
CSMD1-202ENST00000400186 SRRTQ9BXP5 876 aaKnown RBP10.97□□□□□ -0.65
CSMD1-202ENST00000400186 TBCAO75347 108 aaKnown RBP10.97□□□□□ -0.65
CSMD1-202ENST00000400186 TTC14Q96N46 770 aa10.97□□□□□ -0.65
CSMD1-202ENST00000400186 GRIN2BQ13224 1484 aa10.97□□□□□ -0.65
CSMD1-202ENST00000400186 ZPR1O75312 459 aa10.97□□□□□ -0.65
CSMD1-202ENST00000400186 CUL7Q14999 1698 aa10.97□□□□□ -0.65
CSMD1-202ENST00000400186 AQRO60306 1485 aaKnown RBP eCLIP10.97□□□□□ -0.653e-7■■■■■ 34.7
CSMD1-202ENST00000400186 PABPN1LA6NDY0 278 aaKnown RBP10.97□□□□□ -0.65
CSMD1-202ENST00000400186 PIP4K2BP78356 416 aa10.97□□□□□ -0.65
CSMD1-202ENST00000400186 ZBTB16Q05516 673 aa10.97□□□□□ -0.65
CSMD1-202ENST00000400186 TAF7Q15545 349 aaPredicted RBP10.97□□□□□ -0.65
CSMD1-202ENST00000400186 ORC3Q9UBD5 711 aaPredicted RBP10.97□□□□□ -0.65
CSMD1-202ENST00000400186 CEP57Q86XR8 500 aa10.96□□□□□ -0.65
CSMD1-202ENST00000400186 ZNF830Q96NB3 372 aaPredicted RBP10.96□□□□□ -0.65
CSMD1-202ENST00000400186 NOLC1Q14978 699 aaKnown RBP eCLIP10.96□□□□□ -0.65
CSMD1-202ENST00000400186 ERMNQ8TAM6 284 aa10.96□□□□□ -0.65
CSMD1-202ENST00000400186 TTC12Q9H892 705 aaPredicted RBP10.96□□□□□ -0.65
CSMD1-202ENST00000400186 DNAI1Q9UI46 699 aa10.96□□□□□ -0.65
CSMD1-202ENST00000400186 CAPN2P17655 700 aa10.96□□□□□ -0.65
CSMD1-202ENST00000400186 TTC31Q49AM3 519 aaPredicted RBP10.96□□□□□ -0.65
CSMD1-202ENST00000400186 SLC52A1Q9NWF4 448 aa10.96□□□□□ -0.65
CSMD1-202ENST00000400186 CNPY2Q9Y2B0 182 aa10.96□□□□□ -0.65
CSMD1-202ENST00000400186 TTF1Q15361 905 aaPredicted RBP10.96□□□□□ -0.65
CSMD1-202ENST00000400186 MFSD6Q6ZSS7 791 aa10.96□□□□□ -0.65
CSMD1-202ENST00000400186 SYT1P21579 422 aa10.96□□□□□ -0.66
CSMD1-202ENST00000400186 CYLC1P35663 651 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms