RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 ANKRD44Q8N8A2 993 aa8.6□□□□□ -1.03
USP16-203ENST00000399975 UPF1Q92900 1129 aaKnown RBP eCLIP8.6□□□□□ -1.03
USP16-203ENST00000399975 TBC1D2BQ9UPU7 963 aa8.6□□□□□ -1.03
USP16-203ENST00000399975 CWF19L2Q2TBE0 894 aaKnown RBP8.6□□□□□ -1.03
USP16-203ENST00000399975 ZBTB38Q8NAP3 1195 aaPredicted RBP8.6□□□□□ -1.03
USP16-203ENST00000399975 KDM2BQ8NHM5 1336 aa8.59□□□□□ -1.03
USP16-203ENST00000399975 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.59□□□□□ -1.03
USP16-203ENST00000399975 ZPR1O75312 459 aa8.59□□□□□ -1.03
USP16-203ENST00000399975 UBTFL1P0CB47 393 aaPredicted RBP8.59□□□□□ -1.03
USP16-203ENST00000399975 SLC15A2Q16348 729 aa8.59□□□□□ -1.03
USP16-203ENST00000399975 RABL6Q3YEC7 729 aaPredicted RBP8.59□□□□□ -1.03
USP16-203ENST00000399975 PCDHB15Q9Y5E8 787 aa8.59□□□□□ -1.03
USP16-203ENST00000399975 UBN2Q6ZU65 1347 aa8.59□□□□□ -1.03
USP16-203ENST00000399975 PNPLA7Q6ZV29 1317 aa8.59□□□□□ -1.03
USP16-203ENST00000399975 RFC4P35249 363 aa8.59□□□□□ -1.03
USP16-203ENST00000399975 ATP8B2P98198 1209 aa8.59□□□□□ -1.03
USP16-203ENST00000399975 STK32BQ9NY57 414 aa8.59□□□□□ -1.03
USP16-203ENST00000399975 POLA2Q14181 598 aa8.58□□□□□ -1.04
USP16-203ENST00000399975 CEP85Q6P2H3 762 aa8.58□□□□□ -1.04
USP16-203ENST00000399975 NBPF7P0C2Y1 421 aaPredicted RBP8.58□□□□□ -1.04
USP16-203ENST00000399975 HSP90B1P14625 803 aaKnown RBP8.58□□□□□ -1.04
USP16-203ENST00000399975 TM4SF1P30408 202 aa8.58□□□□□ -1.04
USP16-203ENST00000399975 SLC10A5Q5PT55 438 aa8.58□□□□□ -1.04
USP16-203ENST00000399975 USPL1Q5W0Q7 1092 aa8.58□□□□□ -1.04
USP16-203ENST00000399975 PPP1R42Q7Z4L9 355 aa8.58□□□□□ -1.04
USP16-203ENST00000399975 KAZALD1Q96I82 304 aa8.58□□□□□ -1.04
USP16-203ENST00000399975 RWDD1Q9H446 243 aaPredicted RBP8.58□□□□□ -1.04
USP16-203ENST00000399975 C9orf78Q9NZ63 289 aaPredicted RBP8.58□□□□□ -1.04
USP16-203ENST00000399975 LRP5O75197 1615 aa8.58□□□□□ -1.04
USP16-203ENST00000399975 CARMIL3Q8ND23 1372 aa8.58□□□□□ -1.04
USP16-203ENST00000399975 RTL9Q8NET4 1388 aa8.58□□□□□ -1.04
USP16-203ENST00000399975 ATP5J2-PTCD1G3V325 749 aa8.58□□□□□ -1.04
USP16-203ENST00000399975 NTSR2O95665 410 aa8.58□□□□□ -1.04
USP16-203ENST00000399975 GYS1P13807 737 aa8.58□□□□□ -1.04
USP16-203ENST00000399975 NYXQ9GZU5 481 aa8.58□□□□□ -1.04
USP16-203ENST00000399975 FOXO4P98177 505 aa8.57□□□□□ -1.04
USP16-203ENST00000399975 CENPQQ7L2Z9 268 aaPredicted RBP8.57□□□□□ -1.04
USP16-203ENST00000399975 COL23A1Q86Y22 540 aaPredicted RBP8.57□□□□□ -1.04
USP16-203ENST00000399975 SIRT2Q8IXJ6 389 aa8.57□□□□□ -1.04
USP16-203ENST00000399975 SSH3Q8TE77 659 aa8.57□□□□□ -1.04
USP16-203ENST00000399975 SUCLG2Q96I99 432 aa8.57□□□□□ -1.04
USP16-203ENST00000399975 UTP14AQ9BVJ6 771 aaKnown RBP8.57□□□□□ -1.04
USP16-203ENST00000399975 TFCP2L1Q9NZI6 479 aa8.57□□□□□ -1.04
USP16-203ENST00000399975 ZNF330Q9Y3S2 320 aaPredicted RBP8.57□□□□□ -1.04
USP16-203ENST00000399975 CSF1RP07333 972 aa8.57□□□□□ -1.04
USP16-203ENST00000399975 SUSD4Q5VX71 490 aa8.57□□□□□ -1.04
USP16-203ENST00000399975 TBC1D9BQ66K14 1250 aa8.57□□□□□ -1.04
USP16-203ENST00000399975 ANO8Q9HCE9 1232 aaPredicted RBP8.57□□□□□ -1.04
USP16-203ENST00000399975 SRP68Q9UHB9 627 aaKnown RBP8.57□□□□□ -1.04
USP16-203ENST00000399975 LRRFIP2Q9Y608 721 aaKnown RBP8.57□□□□□ -1.04
USP16-203ENST00000399975 KIF13BQ9NQT8 1826 aa8.56□□□□□ -1.04
USP16-203ENST00000399975 DEFB132Q7Z7B7 95 aa8.56□□□□□ -1.04
USP16-203ENST00000399975 NLGN1Q8N2Q7 840 aa8.56□□□□□ -1.04
USP16-203ENST00000399975 NIP7Q9Y221 180 aaKnown RBP eCLIP8.56□□□□□ -1.04
USP16-203ENST00000399975 HMMRO75330 724 aa8.56□□□□□ -1.04
USP16-203ENST00000399975 SMC5Q8IY18 1101 aa8.56□□□□□ -1.04
USP16-203ENST00000399975 SLC16A10Q8TF71 515 aa8.56□□□□□ -1.04
USP16-203ENST00000399975 GCC1Q96CN9 775 aa8.55□□□□□ -1.04
USP16-203ENST00000399975 CCDC136Q96JN2 1154 aa8.55□□□□□ -1.04
USP16-203ENST00000399975 SETDB2Q96T68 719 aa8.55□□□□□ -1.04
USP16-203ENST00000399975 DCTPP1Q9H773 170 aa8.55□□□□□ -1.04
USP16-203ENST00000399975 NOP58Q9Y2X3 529 aaKnown RBP8.55□□□□□ -1.04
USP16-203ENST00000399975 SH3TC1Q8TE82 1336 aa8.55□□□□□ -1.04
USP16-203ENST00000399975 PDE8AO60658 829 aa8.55□□□□□ -1.04
USP16-203ENST00000399975 PHF14O94880 888 aa8.55□□□□□ -1.04
USP16-203ENST00000399975 IGHDP01880 384 aa8.55□□□□□ -1.04
USP16-203ENST00000399975 NFIXQ14938 502 aa8.55□□□□□ -1.04
USP16-203ENST00000399975 UBE3BQ7Z3V4 1068 aa8.55□□□□□ -1.04
USP16-203ENST00000399975 ANKRD31Q8N7Z5 1873 aa8.55□□□□□ -1.04
USP16-203ENST00000399975 TNRC6CQ9HCJ0 1690 aaKnown RBP8.55□□□□□ -1.04
USP16-203ENST00000399975 BICC1Q9H694 974 aaKnown RBP8.55□□□□□ -1.04
USP16-203ENST00000399975 TRMT112Q9UI30 125 aaKnown RBP8.55□□□□□ -1.04
USP16-203ENST00000399975 FBXO3Q9UK99 471 aa8.55□□□□□ -1.04
USP16-203ENST00000399975 GPTP24298 496 aa8.54□□□□□ -1.04
USP16-203ENST00000399975 RFX5P48382 616 aaPredicted RBP8.54□□□□□ -1.04
USP16-203ENST00000399975 C1orf115Q9H7X2 142 aa8.54□□□□□ -1.04
USP16-203ENST00000399975 A0A1B0GUL6 1792 aa8.54□□□□□ -1.04
USP16-203ENST00000399975 DLEC1Q9Y238 1755 aa8.54□□□□□ -1.04
USP16-203ENST00000399975 POLRMTO00411 1230 aaKnown RBP8.54□□□□□ -1.04
USP16-203ENST00000399975 SF3B3Q15393 1217 aaKnown RBP8.54□□□□□ -1.04
USP16-203ENST00000399975 EPHA10Q5JZY3 1008 aa8.54□□□□□ -1.04
USP16-203ENST00000399975 SMIM5Q71RC9 77 aa8.54□□□□□ -1.04
USP16-203ENST00000399975 ARXQ96QS3 562 aa8.54□□□□□ -1.04
USP16-203ENST00000399975 KLRG2A4D1S0 409 aaPredicted RBP8.53□□□□□ -1.04
USP16-203ENST00000399975 IRS4O14654 1257 aaPredicted RBP8.53□□□□□ -1.04
USP16-203ENST00000399975 CTSWP56202 376 aa8.53□□□□□ -1.04
USP16-203ENST00000399975 TPTE2Q6XPS3 522 aa8.53□□□□□ -1.04
USP16-203ENST00000399975 COPRSQ9NQ92 184 aa8.53□□□□□ -1.04
USP16-203ENST00000399975 RBM19Q9Y4C8 960 aaKnown RBP8.53□□□□□ -1.04
USP16-203ENST00000399975 PNMA6EA0A0J9YXQ4 647 aa8.53□□□□□ -1.04
USP16-203ENST00000399975 RAB11FIP3O75154 756 aa8.53□□□□□ -1.04
USP16-203ENST00000399975 EP400Q96L91 3159 aa8.53□□□□□ -1.04
USP16-203ENST00000399975 LRRC37AA6NMS7 1700 aa8.52□□□□□ -1.04
USP16-203ENST00000399975 HSP90AB4PQ58FF6 505 aa8.52□□□□□ -1.04
USP16-203ENST00000399975 B4GALNT3Q6L9W6 998 aa8.52□□□□□ -1.04
USP16-203ENST00000399975 TTLL11Q8NHH1 800 aa8.52□□□□□ -1.04
USP16-203ENST00000399975 FAM89AQ96GI7 184 aa8.52□□□□□ -1.04
USP16-203ENST00000399975 ABCC12Q96J65 1359 aa8.52□□□□□ -1.05
USP16-203ENST00000399975 CIAO1O76071 339 aa8.52□□□□□ -1.05
USP16-203ENST00000399975 DDR1Q08345 913 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms