RNA–Protein interactions for RNA: ENST00000399808.4

IFITM3-201, Transcript of interferon induced transmembrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene IFITM3, Length 808 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM3-201ENST00000399808 CCDC85CA6NKD9 419 aa20.17■□□□□ 0.82
IFITM3-201ENST00000399808 TRAF5O00463 557 aa20.17■□□□□ 0.82
IFITM3-201ENST00000399808 CNGB1Q14028 1251 aaPredicted RBP20.17■□□□□ 0.82
IFITM3-201ENST00000399808 MCM10Q7L590 875 aa20.17■□□□□ 0.82
IFITM3-201ENST00000399808 GPR101Q96P66 508 aaPredicted RBP20.17■□□□□ 0.82
IFITM3-201ENST00000399808 EIF6P56537 245 aaKnown RBP20.16■□□□□ 0.82
IFITM3-201ENST00000399808 NUTM1Q86Y26 1132 aa20.16■□□□□ 0.82
IFITM3-201ENST00000399808 NPC1L1Q9UHC9 1359 aa20.16■□□□□ 0.82
IFITM3-201ENST00000399808 GTF2E1P29083 439 aaPredicted RBP20.15■□□□□ 0.82
IFITM3-201ENST00000399808 MLLT1Q03111 559 aaPredicted RBP20.15■□□□□ 0.82
IFITM3-201ENST00000399808 DCTN1Q14203 1278 aa20.15■□□□□ 0.82
IFITM3-201ENST00000399808 CC2D2BQ6DHV5 1058 aa20.15■□□□□ 0.82
IFITM3-201ENST00000399808 LAMB4A4D0S4 1761 aa20.15■□□□□ 0.82
IFITM3-201ENST00000399808 LMOD1P29536 600 aaPredicted RBP20.14■□□□□ 0.81
IFITM3-201ENST00000399808 HOXA10P31260 410 aaPredicted RBP20.14■□□□□ 0.81
IFITM3-201ENST00000399808 ECE1P42892 770 aa20.14■□□□□ 0.81
IFITM3-201ENST00000399808 GRM1Q13255 1194 aa20.14■□□□□ 0.81
IFITM3-201ENST00000399808 PAXIP1Q6ZW49 1069 aaPredicted RBP20.14■□□□□ 0.81
IFITM3-201ENST00000399808 TSKSQ9UJT2 592 aa20.14■□□□□ 0.81
IFITM3-201ENST00000399808 TLL2Q9Y6L7 1015 aa20.14■□□□□ 0.81
IFITM3-201ENST00000399808 AOC2O75106 756 aa20.13■□□□□ 0.81
IFITM3-201ENST00000399808 USP50Q70EL3 339 aaPredicted RBP20.13■□□□□ 0.81
IFITM3-201ENST00000399808 LARGE2Q8N3Y3 721 aa20.12■□□□□ 0.81
IFITM3-201ENST00000399808 BEGAINQ9BUH8 593 aa20.12■□□□□ 0.81
IFITM3-201ENST00000399808 NYXQ9GZU5 481 aa20.11■□□□□ 0.81
IFITM3-201ENST00000399808 DLG5Q8TDM6 1919 aa20.1■□□□□ 0.81
IFITM3-201ENST00000399808 MAP2K2P36507 400 aa20.1■□□□□ 0.81
IFITM3-201ENST00000399808 NGEFQ8N5V2 710 aa20.1■□□□□ 0.81
IFITM3-201ENST00000399808 RTF1Q92541 710 aaKnown RBP20.1■□□□□ 0.81
IFITM3-201ENST00000399808 MIS18AQ9NYP9 233 aa20.1■□□□□ 0.81
IFITM3-201ENST00000399808 RIC1Q4ADV7 1423 aa20.1■□□□□ 0.81
IFITM3-201ENST00000399808 UBN2Q6ZU65 1347 aa20.09■□□□□ 0.81
IFITM3-201ENST00000399808 ERVV-1B6SEH8 477 aa20.09■□□□□ 0.81
IFITM3-201ENST00000399808 TCERG1O14776 1098 aaKnown RBP20.09■□□□□ 0.81
IFITM3-201ENST00000399808 TTLL7Q6ZT98 887 aa20.09■□□□□ 0.81
IFITM3-201ENST00000399808 RPGRQ92834 1020 aaKnown RBP20.09■□□□□ 0.81
IFITM3-201ENST00000399808 CRAMP1Q96RY5 1269 aa20.09■□□□□ 0.81
IFITM3-201ENST00000399808 KDM3BQ7LBC6 1761 aa20.08■□□□□ 0.81
IFITM3-201ENST00000399808 MAP3K15Q6ZN16 1313 aa20.08■□□□□ 0.81
IFITM3-201ENST00000399808 TAF7Q15545 349 aaPredicted RBP20.08■□□□□ 0.81
IFITM3-201ENST00000399808 GRIPAP1Q4V328 841 aa20.08■□□□□ 0.81
IFITM3-201ENST00000399808 SUSD4Q5VX71 490 aa20.08■□□□□ 0.81
IFITM3-201ENST00000399808 C3orf67Q6ZVT6 689 aa20.08■□□□□ 0.81
IFITM3-201ENST00000399808 SAPCD2Q86UD0 394 aa20.08■□□□□ 0.81
IFITM3-201ENST00000399808 GPRC5DQ9NZD1 345 aa20.08■□□□□ 0.81
IFITM3-201ENST00000399808 GPTP24298 496 aa20.07■□□□□ 0.8
IFITM3-201ENST00000399808 MCOLN1Q9GZU1 580 aa20.07■□□□□ 0.8
IFITM3-201ENST00000399808 HTATSF1O43719 755 aaKnown RBP20.06■□□□□ 0.8
IFITM3-201ENST00000399808 CXCL9Q07325 125 aa20.06■□□□□ 0.8
IFITM3-201ENST00000399808 NIM1KQ8IY84 436 aa20.06■□□□□ 0.8
IFITM3-201ENST00000399808 ADARB2Q9NS39 739 aaKnown RBP20.06■□□□□ 0.8
IFITM3-201ENST00000399808 RRP7AQ9Y3A4 280 aaKnown RBP20.06■□□□□ 0.8
IFITM3-201ENST00000399808 POLR2AP24928 1970 aaKnown RBP20.06■□□□□ 0.8
IFITM3-201ENST00000399808 PPEF1O14829 653 aaPredicted RBP20.05■□□□□ 0.8
IFITM3-201ENST00000399808 PPIP5K2O43314 1243 aa20.05■□□□□ 0.8
IFITM3-201ENST00000399808 U2AF1L5P0DN76 240 aaPredicted RBP20.05■□□□□ 0.8
IFITM3-201ENST00000399808 U2AF1Q01081 240 aaKnown RBP eCLIP20.05■□□□□ 0.8
IFITM3-201ENST00000399808 AOC3Q16853 763 aa20.05■□□□□ 0.8
IFITM3-201ENST00000399808 ZNF34Q8IZ26 560 aa20.05■□□□□ 0.8
IFITM3-201ENST00000399808 RBM17Q96I25 401 aaKnown RBP20.05■□□□□ 0.8
IFITM3-201ENST00000399808 GLIS2Q9BZE0 524 aaPredicted RBP20.05■□□□□ 0.8
IFITM3-201ENST00000399808 PGAP2Q9UHJ9 254 aa20.05■□□□□ 0.8
IFITM3-201ENST00000399808 IBTKQ9P2D0 1353 aaPredicted RBP20.05■□□□□ 0.8
IFITM3-201ENST00000399808 LAMB2P55268 1798 aa20.04■□□□□ 0.8
IFITM3-201ENST00000399808 CELF2O95319 508 aaKnown RBP20.04■□□□□ 0.8
IFITM3-201ENST00000399808 NTSR2O95665 410 aa20.04■□□□□ 0.8
IFITM3-201ENST00000399808 CFAP53Q96M91 514 aa20.04■□□□□ 0.8
IFITM3-201ENST00000399808 ZBTB3Q9H5J0 574 aa20.04■□□□□ 0.8
IFITM3-201ENST00000399808 TAF1P21675 1872 aa20.03■□□□□ 0.8
IFITM3-201ENST00000399808 HIRAP54198 1017 aaPredicted RBP20.03■□□□□ 0.8
IFITM3-201ENST00000399808 HHIPL1Q96JK4 782 aa20.03■□□□□ 0.8
IFITM3-201ENST00000399808 NUDCQ9Y266 331 aa20.03■□□□□ 0.8
IFITM3-201ENST00000399808 GMPSP49915 693 aaPredicted RBP20.02■□□□□ 0.8
IFITM3-201ENST00000399808 ZIC5Q96T25 663 aa20.02■□□□□ 0.8
IFITM3-201ENST00000399808 ZNRF3Q9ULT6 936 aa20.02■□□□□ 0.8
IFITM3-201ENST00000399808 ATP6V0A2Q9Y487 856 aa20.02■□□□□ 0.8
IFITM3-201ENST00000399808 CA12O43570 354 aa20.01■□□□□ 0.79
IFITM3-201ENST00000399808 MYL6BP14649 208 aa20.01■□□□□ 0.79
IFITM3-201ENST00000399808 BRPF1P55201 1214 aaPredicted RBP20.01■□□□□ 0.79
IFITM3-201ENST00000399808 CIAPIN1Q6FI81 312 aa20.01■□□□□ 0.79
IFITM3-201ENST00000399808 KIF6Q6ZMV9 814 aa20.01■□□□□ 0.79
IFITM3-201ENST00000399808 VPS33BQ9H267 617 aa20.01■□□□□ 0.79
IFITM3-201ENST00000399808 PCDH10Q9P2E7 1040 aa20.01■□□□□ 0.79
IFITM3-201ENST00000399808 EIF4A1P60842 406 aaKnown RBP20■□□□□ 0.79
IFITM3-201ENST00000399808 GIGYF2Q6Y7W6 1299 aaKnown RBP20■□□□□ 0.79
IFITM3-201ENST00000399808 CFAP44Q96MT7 982 aa20■□□□□ 0.79
IFITM3-201ENST00000399808 RTFDC1Q9BY42 306 aaPredicted RBP20■□□□□ 0.79
IFITM3-201ENST00000399808 PDE4DIPQ5VU43 2346 aa20■□□□□ 0.79
IFITM3-201ENST00000399808 ANKRD36CQ5JPF3 1778 aa20■□□□□ 0.79
IFITM3-201ENST00000399808 TNRC18O15417 2968 aaPredicted RBP19.99■□□□□ 0.79
IFITM3-201ENST00000399808 DGKZQ13574 1117 aa19.99■□□□□ 0.79
IFITM3-201ENST00000399808 SLC10A5Q5PT55 438 aa19.99■□□□□ 0.79
IFITM3-201ENST00000399808 SHTN1A0MZ66 631 aa19.98■□□□□ 0.79
IFITM3-201ENST00000399808 PPP2R1AP30153 589 aa19.98■□□□□ 0.79
IFITM3-201ENST00000399808 DLK2Q6UY11 383 aa19.98■□□□□ 0.79
IFITM3-201ENST00000399808 TRPM4Q8TD43 1214 aa19.98■□□□□ 0.79
IFITM3-201ENST00000399808 NLRP3Q96P20 1036 aa19.98■□□□□ 0.79
IFITM3-201ENST00000399808 ZNF408Q9H9D4 720 aa19.98■□□□□ 0.79
IFITM3-201ENST00000399808 ABCC4O15439 1325 aa19.98■□□□□ 0.79
IFITM3-201ENST00000399808 CCER1Q8TC90 406 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms