RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 TOP1P11387 765 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-215ENST00000399637 MICALCLQ6ZW33 695 aa12.7□□□□□ -0.38
CACNA1C-215ENST00000399637 IVNS1ABPQ9Y6Y0 642 aa12.7□□□□□ -0.38
CACNA1C-215ENST00000399637 YEATS4O95619 227 aa12.7□□□□□ -0.38
CACNA1C-215ENST00000399637 BMS1Q14692 1282 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-215ENST00000399637 KIF1BPQ96EK5 621 aa12.7□□□□□ -0.38
CACNA1C-215ENST00000399637 TMOD4Q9NZQ9 345 aa12.7□□□□□ -0.38
CACNA1C-215ENST00000399637 TMX1Q9H3N1 280 aa12.7□□□□□ -0.38
CACNA1C-215ENST00000399637 MMRN2Q9H8L6 949 aa12.7□□□□□ -0.38
CACNA1C-215ENST00000399637 HMGB1P09429 215 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 TDRD12Q587J7 1177 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 STXBP4Q6ZWJ1 553 aa12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 SPATA24Q86W54 205 aa12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 RPAP2Q8IXW5 612 aaPredicted RBP12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 TERF1P54274 439 aa12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 ALS2CR12Q96Q35 445 aa12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 PRC1O43663 620 aa12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 APBA3O96018 575 aa12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 SFPQP23246 707 aaKnown RBP eCLIP12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 CALML4Q96GE6 196 aa12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 ERBINQ96RT1 1412 aa12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 PAFAH1B1P43034 410 aa12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 RNF41Q9H4P4 317 aaPredicted RBP12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 RPRD2Q5VT52 1461 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 RNF123Q5XPI4 1314 aa12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 SH3BP5O60239 455 aa12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 PTPN14Q15678 1187 aa12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 BRDTQ58F21 947 aaPredicted RBP12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 PRPF40BQ6NWY9 871 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 C8orf76Q96K31 380 aa12.69□□□□□ -0.38
CACNA1C-215ENST00000399637 CCDC194A0A1B0GVG4 234 aa12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 CSPG5O95196 566 aa12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 KIF4BQ2VIQ3 1234 aa12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 CATIPQ7Z7H3 387 aa12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 PHACTR2O75167 634 aa12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 AMPD3Q01432 767 aa12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 TTC21AQ8NDW8 1320 aa12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 MYCP01106 439 aaPredicted RBP12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 WAPLQ7Z5K2 1190 aa12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 PROCA1Q8NCQ7 364 aaPredicted RBP12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 HECW1Q76N89 1606 aa12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 DNA2P51530 1060 aa12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 SP4Q02446 784 aa12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 DPY19L2Q6NUT2 758 aa12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 CCDC12Q8WUD4 166 aaPredicted RBP12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 SLC12A5Q9H2X9 1139 aa12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 ATAD2Q6PL18 1390 aa12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 GOLGA8AA7E2F4 631 aa12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 GOLGA8BA8MQT2 603 aa12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 ZNF213O14771 459 aa12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 PDCL2Q8N4E4 241 aa12.68□□□□□ -0.38
CACNA1C-215ENST00000399637 TSPY2A6NKD2 308 aa12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 CNGA1P29973 690 aa12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 NAA15Q9BXJ9 866 aaKnown RBP12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 ZC3H12CQ9C0D7 883 aaKnown RBP12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 PLEKHH1Q9ULM0 1364 aa12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 PCF11O94913 1555 aaKnown RBP12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 FAM114A1Q8IWE2 563 aa12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 CDCA7Q9BWT1 371 aaPredicted RBP12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 KAT14Q9H8E8 782 aa12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 BCS1LQ9Y276 419 aa12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 CCDC152Q4G0S7 254 aa12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 CCDC183Q5T5S1 534 aa12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 RNF187Q5TA31 235 aaPredicted RBP12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 SMARCC1Q92922 1105 aaPredicted RBP12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 TEX13AQ9BXU3 409 aaPredicted RBP12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 TTC36A6NLP5 189 aa12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 GLRX3O76003 335 aaKnown RBP12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 SIRT1Q96EB6 747 aa12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 SEPT6Q14141 434 aa12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 NFE2L2Q16236 605 aa12.67□□□□□ -0.38
CACNA1C-215ENST00000399637 MX1P20591 662 aa12.66□□□□□ -0.38
CACNA1C-215ENST00000399637 MTIF2P46199 727 aaKnown RBP12.66□□□□□ -0.38
CACNA1C-215ENST00000399637 AMOTQ4VCS5 1084 aa12.66□□□□□ -0.38
CACNA1C-215ENST00000399637 ZNF804AQ7Z570 1209 aa12.66□□□□□ -0.38
CACNA1C-215ENST00000399637 SYCE3A1L190 88 aa12.66□□□□□ -0.38
CACNA1C-215ENST00000399637 FCHSD2O94868 740 aa12.66□□□□□ -0.38
CACNA1C-215ENST00000399637 CCDC40Q4G0X9 1142 aa12.66□□□□□ -0.38
CACNA1C-215ENST00000399637 CNNM3Q8NE01 707 aa12.66□□□□□ -0.38
CACNA1C-215ENST00000399637 GTF3C6Q969F1 213 aa12.66□□□□□ -0.38
CACNA1C-215ENST00000399637 CCDC174Q6PII3 467 aa12.66□□□□□ -0.38
CACNA1C-215ENST00000399637 CPLX3Q8WVH0 158 aa12.66□□□□□ -0.38
CACNA1C-215ENST00000399637 CCDC160A6NGH7 325 aa12.66□□□□□ -0.38
CACNA1C-215ENST00000399637 POTEB2H3BUK9 544 aa12.66□□□□□ -0.38
CACNA1C-215ENST00000399637 TCHPQ9BT92 498 aa12.66□□□□□ -0.38
CACNA1C-215ENST00000399637 CTAGE5O15320 804 aa12.66□□□□□ -0.38
CACNA1C-215ENST00000399637 NLRP3Q96P20 1036 aa12.66□□□□□ -0.38
CACNA1C-215ENST00000399637 SH2B1Q9NRF2 756 aaPredicted RBP12.66□□□□□ -0.38
CACNA1C-215ENST00000399637 ZRANB1Q9UGI0 708 aa12.66□□□□□ -0.38
CACNA1C-215ENST00000399637 FSD2A1L4K1 749 aa12.65□□□□□ -0.38
CACNA1C-215ENST00000399637 BOLA2Q9H3K6 86 aa12.65□□□□□ -0.38
CACNA1C-215ENST00000399637 URI1O94763 535 aaPredicted RBP12.65□□□□□ -0.38
CACNA1C-215ENST00000399637 PDE4BQ07343 736 aa12.65□□□□□ -0.38
CACNA1C-215ENST00000399637 SREK1Q8WXA9 508 aaKnown RBP12.65□□□□□ -0.38
CACNA1C-215ENST00000399637 CLIP2Q9UDT6 1046 aa12.65□□□□□ -0.38
CACNA1C-215ENST00000399637 IFIT3O14879 490 aaKnown RBP12.65□□□□□ -0.38
CACNA1C-215ENST00000399637 ESPNB1AK53 854 aa12.65□□□□□ -0.38
CACNA1C-215ENST00000399637 DUSP27Q5VZP5 1158 aa12.65□□□□□ -0.38
CACNA1C-215ENST00000399637 EYA3Q99504 573 aa12.65□□□□□ -0.38
CACNA1C-215ENST00000399637 NYXQ9GZU5 481 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms