RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 ZSCAN22P10073 491 aaPredicted RBP27.73■■■□□ 2.03
RABGGTA-202ENST00000399409 JAKMIP1Q96N16 626 aaKnown RBP27.73■■■□□ 2.03
RABGGTA-202ENST00000399409 FMNL2Q96PY5 1086 aa27.73■■■□□ 2.03
RABGGTA-202ENST00000399409 ERBB4Q15303 1308 aa27.73■■■□□ 2.03
RABGGTA-202ENST00000399409 TNS3Q68CZ2 1445 aa27.73■■■□□ 2.03
RABGGTA-202ENST00000399409 PKD1L3Q7Z443 1732 aa27.72■■■□□ 2.03
RABGGTA-202ENST00000399409 CCDC8Q9H0W5 538 aaPredicted RBP27.72■■■□□ 2.03
RABGGTA-202ENST00000399409 SYCE3A1L190 88 aa27.72■■■□□ 2.03
RABGGTA-202ENST00000399409 HS1BP3Q53T59 392 aa27.72■■■□□ 2.03
RABGGTA-202ENST00000399409 LRP10Q7Z4F1 713 aa27.72■■■□□ 2.03
RABGGTA-202ENST00000399409 MAP4K1Q92918 833 aa27.71■■■□□ 2.03
RABGGTA-202ENST00000399409 COPRSQ9NQ92 184 aa27.71■■■□□ 2.03
RABGGTA-202ENST00000399409 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.71■■■□□ 2.03
RABGGTA-202ENST00000399409 PHF14O94880 888 aa27.71■■■□□ 2.03
RABGGTA-202ENST00000399409 NMIQ13287 307 aaPredicted RBP27.71■■■□□ 2.03
RABGGTA-202ENST00000399409 ATP6V1DQ9Y5K8 247 aa27.71■■■□□ 2.03
RABGGTA-202ENST00000399409 STX6O43752 255 aa27.7■■■□□ 2.03
RABGGTA-202ENST00000399409 RBM8AQ9Y5S9 174 aaKnown RBP27.7■■■□□ 2.03
RABGGTA-202ENST00000399409 USP48Q86UV5 1035 aa27.7■■■□□ 2.02
RABGGTA-202ENST00000399409 PSMA5P28066 241 aa27.69■■■□□ 2.02
RABGGTA-202ENST00000399409 CREB3L3Q68CJ9 461 aa27.69■■■□□ 2.02
RABGGTA-202ENST00000399409 PDLIM2Q96JY6 352 aa27.69■■■□□ 2.02
RABGGTA-202ENST00000399409 SIL1Q9H173 461 aa27.69■■■□□ 2.02
RABGGTA-202ENST00000399409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.69■■■□□ 2.02
RABGGTA-202ENST00000399409 CYP27B1O15528 508 aa27.69■■■□□ 2.02
RABGGTA-202ENST00000399409 CADPS2Q86UW7 1296 aa27.69■■■□□ 2.02
RABGGTA-202ENST00000399409 CPDO75976 1380 aa27.68■■■□□ 2.02
RABGGTA-202ENST00000399409 SYT1P21579 422 aa27.68■■■□□ 2.02
RABGGTA-202ENST00000399409 KCNJ4P48050 445 aa27.68■■■□□ 2.02
RABGGTA-202ENST00000399409 FSD1Q9BTV5 496 aa27.68■■■□□ 2.02
RABGGTA-202ENST00000399409 TLR7Q9NYK1 1049 aaKnown RBP27.68■■■□□ 2.02
RABGGTA-202ENST00000399409 USP16Q9Y5T5 823 aa27.68■■■□□ 2.02
RABGGTA-202ENST00000399409 ADCK5Q3MIX3 580 aa27.67■■■□□ 2.02
RABGGTA-202ENST00000399409 EPHA10Q5JZY3 1008 aa27.67■■■□□ 2.02
RABGGTA-202ENST00000399409 ZSCAN30Q86W11 494 aa27.67■■■□□ 2.02
RABGGTA-202ENST00000399409 FAM227BQ96M60 508 aa27.67■■■□□ 2.02
RABGGTA-202ENST00000399409 PDIA4P13667 645 aaKnown RBP27.67■■■□□ 2.02
RABGGTA-202ENST00000399409 RNF20Q5VTR2 975 aa27.67■■■□□ 2.02
RABGGTA-202ENST00000399409 CABP4P57796 275 aa27.66■■■□□ 2.02
RABGGTA-202ENST00000399409 RABL6Q3YEC7 729 aaPredicted RBP27.66■■■□□ 2.02
RABGGTA-202ENST00000399409 BOLA2Q9H3K6 86 aa27.66■■■□□ 2.02
RABGGTA-202ENST00000399409 CPA1P15085 419 aa27.66■■■□□ 2.02
RABGGTA-202ENST00000399409 DDX17Q92841 729 aaKnown RBP27.66■■■□□ 2.02
RABGGTA-202ENST00000399409 MED23Q9ULK4 1368 aa27.65■■■□□ 2.02
RABGGTA-202ENST00000399409 F13A1P00488 732 aa27.65■■■□□ 2.02
RABGGTA-202ENST00000399409 RFX5P48382 616 aaPredicted RBP27.65■■■□□ 2.02
RABGGTA-202ENST00000399409 TSPY26PQ9H489 355 aa27.65■■■□□ 2.02
RABGGTA-202ENST00000399409 PARP4Q9UKK3 1724 aaKnown RBP27.65■■■□□ 2.02
RABGGTA-202ENST00000399409 SPATA31A3Q5VYP0 1347 aa27.64■■■□□ 2.02
RABGGTA-202ENST00000399409 SLC27A2O14975 620 aa27.64■■■□□ 2.02
RABGGTA-202ENST00000399409 ATP5JP18859 108 aa27.64■■■□□ 2.02
RABGGTA-202ENST00000399409 ALDH8A1Q9H2A2 487 aaPredicted RBP27.64■■■□□ 2.02
RABGGTA-202ENST00000399409 RFX7Q2KHR2 1363 aa27.64■■■□□ 2.01
RABGGTA-202ENST00000399409 JCADQ9P266 1359 aa27.64■■■□□ 2.01
RABGGTA-202ENST00000399409 LAMB4A4D0S4 1761 aa27.64■■■□□ 2.01
RABGGTA-202ENST00000399409 LARGE1O95461 756 aa27.64■■■□□ 2.01
RABGGTA-202ENST00000399409 CSPP1Q1MSJ5 1256 aa27.64■■■□□ 2.01
RABGGTA-202ENST00000399409 CCDC83Q8IWF9 413 aa27.64■■■□□ 2.01
RABGGTA-202ENST00000399409 PLBD2Q8NHP8 589 aa27.64■■■□□ 2.01
RABGGTA-202ENST00000399409 KLHDC4Q8TBB5 520 aa27.64■■■□□ 2.01
RABGGTA-202ENST00000399409 AFDNP55196 1824 aaKnown RBP27.63■■■□□ 2.01
RABGGTA-202ENST00000399409 GADD45BO75293 160 aaPredicted RBP27.63■■■□□ 2.01
RABGGTA-202ENST00000399409 ANKRD1Q15327 319 aa27.63■■■□□ 2.01
RABGGTA-202ENST00000399409 KLHL34Q8N239 644 aa27.63■■■□□ 2.01
RABGGTA-202ENST00000399409 CABLES1Q8TDN4 633 aa27.63■■■□□ 2.01
RABGGTA-202ENST00000399409 LARP6Q9BRS8 491 aaKnown RBP27.63■■■□□ 2.01
RABGGTA-202ENST00000399409 HMG20BQ9P0W2 317 aa27.63■■■□□ 2.01
RABGGTA-202ENST00000399409 ARFGEF2Q9Y6D5 1785 aa27.62■■■□□ 2.01
RABGGTA-202ENST00000399409 A0A0D9SFI3 127 aa27.62■■■□□ 2.01
RABGGTA-202ENST00000399409 GJB2P29033 226 aa27.62■■■□□ 2.01
RABGGTA-202ENST00000399409 CHRNA2Q15822 529 aa27.62■■■□□ 2.01
RABGGTA-202ENST00000399409 STRCP1A6NGW2 1772 aa27.62■■■□□ 2.01
RABGGTA-202ENST00000399409 PTPN12Q05209 780 aaKnown RBP27.62■■■□□ 2.01
RABGGTA-202ENST00000399409 FOXD4L6Q3SYB3 417 aaPredicted RBP27.62■■■□□ 2.01
RABGGTA-202ENST00000399409 FOXD4L3Q6VB84 417 aaPredicted RBP27.62■■■□□ 2.01
RABGGTA-202ENST00000399409 GDPD2Q9HCC8 539 aa27.62■■■□□ 2.01
RABGGTA-202ENST00000399409 TNNI3KQ59H18 835 aa27.61■■■□□ 2.01
RABGGTA-202ENST00000399409 FPGT-TNNI3KV9GXZ4 949 aa27.61■■■□□ 2.01
RABGGTA-202ENST00000399409 LETM1O95202 739 aaPredicted RBP27.61■■■□□ 2.01
RABGGTA-202ENST00000399409 UBE2HP62256 183 aa27.61■■■□□ 2.01
RABGGTA-202ENST00000399409 TSGA10IPQ3SY00 556 aa27.61■■■□□ 2.01
RABGGTA-202ENST00000399409 CNPY2Q9Y2B0 182 aa27.61■■■□□ 2.01
RABGGTA-202ENST00000399409 UBE3BQ7Z3V4 1068 aa27.6■■■□□ 2.01
RABGGTA-202ENST00000399409 ME3Q16798 604 aa27.59■■■□□ 2.01
RABGGTA-202ENST00000399409 CCDC183Q5T5S1 534 aa27.59■■■□□ 2.01
RABGGTA-202ENST00000399409 A0A087WZG4 1122 aa27.58■■■□□ 2.01
RABGGTA-202ENST00000399409 MSNP26038 577 aaKnown RBP27.58■■■□□ 2.01
RABGGTA-202ENST00000399409 BLOC1S2Q6QNY1 142 aa27.58■■■□□ 2.01
RABGGTA-202ENST00000399409 NAP1L5Q96NT1 182 aaPredicted RBP27.58■■■□□ 2.01
RABGGTA-202ENST00000399409 MTMR6Q9Y217 621 aa27.58■■■□□ 2.01
RABGGTA-202ENST00000399409 GLI3P10071 1580 aa27.58■■■□□ 2.01
RABGGTA-202ENST00000399409 TFCP2Q12800 502 aa27.58■■■□□ 2.01
RABGGTA-202ENST00000399409 DBNLQ9UJU6 430 aaKnown RBP27.58■■■□□ 2.01
RABGGTA-202ENST00000399409 CASP7P55210 303 aa27.57■■■□□ 2
RABGGTA-202ENST00000399409 FAM184AQ8NB25 1140 aa27.57■■■□□ 2
RABGGTA-202ENST00000399409 KRT32Q14532 448 aa27.56■■■□□ 2
RABGGTA-202ENST00000399409 USPL1Q5W0Q7 1092 aa27.56■■■□□ 2
RABGGTA-202ENST00000399409 TPCN1Q9ULQ1 816 aa27.56■■■□□ 2
RABGGTA-202ENST00000399409 TCHHQ07283 1943 aa27.56■■■□□ 2
RABGGTA-202ENST00000399409 RPS6KB1P23443 525 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms