RNA–Protein interactions for RNA: ENST00000398652.7

FAM3B-204, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM3B, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-204ENST00000398652 TPTE2Q6XPS3 522 aa18.68■□□□□ 0.58
FAM3B-204ENST00000398652 USP50Q70EL3 339 aaPredicted RBP18.67■□□□□ 0.58
FAM3B-204ENST00000398652 EPS15P42566 896 aa18.66■□□□□ 0.58
FAM3B-204ENST00000398652 BRPF1P55201 1214 aaPredicted RBP18.66■□□□□ 0.58
FAM3B-204ENST00000398652 DGKZQ13574 1117 aa18.66■□□□□ 0.58
FAM3B-204ENST00000398652 IL17REQ8NFR9 667 aa18.66■□□□□ 0.58
FAM3B-204ENST00000398652 RGL2O15211 777 aa18.65■□□□□ 0.58
FAM3B-204ENST00000398652 SAPCD2Q86UD0 394 aa18.65■□□□□ 0.58
FAM3B-204ENST00000398652 GNAT3A8MTJ3 354 aa18.64■□□□□ 0.57
FAM3B-204ENST00000398652 CC2D2BQ6DHV5 1058 aa18.64■□□□□ 0.57
FAM3B-204ENST00000398652 HHIPL1Q96JK4 782 aa18.64■□□□□ 0.57
FAM3B-204ENST00000398652 NIP7Q9Y221 180 aaKnown RBP eCLIP18.64■□□□□ 0.57
FAM3B-204ENST00000398652 KNSTRNQ9Y448 316 aa18.64■□□□□ 0.57
FAM3B-204ENST00000398652 PIP4K2AP48426 406 aaPredicted RBP18.63■□□□□ 0.57
FAM3B-204ENST00000398652 DIAPH1O60610 1272 aaKnown RBP18.62■□□□□ 0.57
FAM3B-204ENST00000398652 LARGE2Q8N3Y3 721 aa18.62■□□□□ 0.57
FAM3B-204ENST00000398652 GAS2L2Q8NHY3 880 aa18.62■□□□□ 0.57
FAM3B-204ENST00000398652 USP16Q9Y5T5 823 aa18.62■□□□□ 0.57
FAM3B-204ENST00000398652 CEMIPQ8WUJ3 1361 aa18.62■□□□□ 0.57
FAM3B-204ENST00000398652 CELF2O95319 508 aaKnown RBP18.61■□□□□ 0.57
FAM3B-204ENST00000398652 CRY2Q49AN0 593 aa18.61■□□□□ 0.57
FAM3B-204ENST00000398652 NUP98P52948 1817 aa18.6■□□□□ 0.57
FAM3B-204ENST00000398652 FAM177BA6PVY3 158 aa18.6■□□□□ 0.57
FAM3B-204ENST00000398652 KCNQ3O43525 872 aa18.6■□□□□ 0.57
FAM3B-204ENST00000398652 GRIPAP1Q4V328 841 aa18.6■□□□□ 0.57
FAM3B-204ENST00000398652 AMER1Q5JTC6 1135 aaPredicted RBP18.6■□□□□ 0.57
FAM3B-204ENST00000398652 ADARB2Q9NS39 739 aaKnown RBP18.6■□□□□ 0.57
FAM3B-204ENST00000398652 BTBD11A6QL63 1104 aa18.59■□□□□ 0.57
FAM3B-204ENST00000398652 GTF2E1P29083 439 aaPredicted RBP18.59■□□□□ 0.57
FAM3B-204ENST00000398652 CIAPIN1Q6FI81 312 aa18.59■□□□□ 0.57
FAM3B-204ENST00000398652 GPRC5DQ9NZD1 345 aa18.59■□□□□ 0.57
FAM3B-204ENST00000398652 TIMELESSQ9UNS1 1208 aa18.59■□□□□ 0.57
FAM3B-204ENST00000398652 LAMB4A4D0S4 1761 aa18.58■□□□□ 0.57
FAM3B-204ENST00000398652 ABCC12Q96J65 1359 aa18.58■□□□□ 0.57
FAM3B-204ENST00000398652 RIC1Q4ADV7 1423 aa18.57■□□□□ 0.56
FAM3B-204ENST00000398652 AKAP11Q9UKA4 1901 aa18.57■□□□□ 0.56
FAM3B-204ENST00000398652 PRAMEF22A3QJZ6 481 aa18.57■□□□□ 0.56
FAM3B-204ENST00000398652 NIM1KQ8IY84 436 aa18.57■□□□□ 0.56
FAM3B-204ENST00000398652 COL3A1P02461 1466 aaPredicted RBP18.57■□□□□ 0.56
FAM3B-204ENST00000398652 SNRPA1P09661 255 aaKnown RBP18.56■□□□□ 0.56
FAM3B-204ENST00000398652 EIF4G2P78344 907 aaKnown RBP eCLIP18.56■□□□□ 0.56
FAM3B-204ENST00000398652 NOGQ13253 232 aa18.56■□□□□ 0.56
FAM3B-204ENST00000398652 PRPF38BQ5VTL8 546 aaKnown RBP18.56■□□□□ 0.56
FAM3B-204ENST00000398652 GLIS2Q9BZE0 524 aaPredicted RBP18.56■□□□□ 0.56
FAM3B-204ENST00000398652 NBPF26B4DH59 902 aa18.55■□□□□ 0.56
FAM3B-204ENST00000398652 HSPA5P11021 654 aaKnown RBP18.55■□□□□ 0.56
FAM3B-204ENST00000398652 HOXA10P31260 410 aaPredicted RBP18.55■□□□□ 0.56
FAM3B-204ENST00000398652 SOX10P56693 466 aa18.55■□□□□ 0.56
FAM3B-204ENST00000398652 NBPF10Q6P3W6 841 aaKnown RBP18.55■□□□□ 0.56
FAM3B-204ENST00000398652 NBPF15Q8N660 670 aa18.55■□□□□ 0.56
FAM3B-204ENST00000398652 RPGRQ92834 1020 aaKnown RBP18.55■□□□□ 0.56
FAM3B-204ENST00000398652 NYXQ9GZU5 481 aa18.55■□□□□ 0.56
FAM3B-204ENST00000398652 PGAP2Q9UHJ9 254 aa18.55■□□□□ 0.56
FAM3B-204ENST00000398652 KIF7Q2M1P5 1343 aa18.54■□□□□ 0.56
FAM3B-204ENST00000398652 HLFQ16534 295 aa18.54■□□□□ 0.56
FAM3B-204ENST00000398652 ZNF408Q9H9D4 720 aa18.54■□□□□ 0.56
FAM3B-204ENST00000398652 NPC1L1Q9UHC9 1359 aa18.54■□□□□ 0.56
FAM3B-204ENST00000398652 PPIP5K2O43314 1243 aa18.53■□□□□ 0.56
FAM3B-204ENST00000398652 NUTM1Q86Y26 1132 aa18.53■□□□□ 0.56
FAM3B-204ENST00000398652 CDHR2Q9BYE9 1310 aa18.52■□□□□ 0.56
FAM3B-204ENST00000398652 PPEF1O14829 653 aaPredicted RBP18.52■□□□□ 0.56
FAM3B-204ENST00000398652 U2SURPO15042 1029 aaKnown RBP18.52■□□□□ 0.56
FAM3B-204ENST00000398652 ZC3H15Q8WU90 426 aaKnown RBP18.52■□□□□ 0.56
FAM3B-204ENST00000398652 ZIC5Q96T25 663 aa18.52■□□□□ 0.56
FAM3B-204ENST00000398652 IBTKQ9P2D0 1353 aaPredicted RBP18.52■□□□□ 0.55
FAM3B-204ENST00000398652 GMPSP49915 693 aaPredicted RBP18.51■□□□□ 0.55
FAM3B-204ENST00000398652 AOC3Q16853 763 aa18.51■□□□□ 0.55
FAM3B-204ENST00000398652 CDC37L1Q7L3B6 337 aa18.51■□□□□ 0.55
FAM3B-204ENST00000398652 SLC51AQ86UW1 340 aa18.51■□□□□ 0.55
FAM3B-204ENST00000398652 CRAMP1Q96RY5 1269 aa18.51■□□□□ 0.55
FAM3B-204ENST00000398652 VPS33BQ9H267 617 aa18.51■□□□□ 0.55
FAM3B-204ENST00000398652 SAGE1Q9NXZ1 904 aa18.51■□□□□ 0.55
FAM3B-204ENST00000398652 POLR2AP24928 1970 aaKnown RBP18.51■□□□□ 0.55
FAM3B-204ENST00000398652 CXCL9Q07325 125 aa18.5■□□□□ 0.55
FAM3B-204ENST00000398652 RBM17Q96I25 401 aaKnown RBP18.5■□□□□ 0.55
FAM3B-204ENST00000398652 ZNRF3Q9ULT6 936 aa18.5■□□□□ 0.55
FAM3B-204ENST00000398652 TCERG1O14776 1098 aaKnown RBP18.49■□□□□ 0.55
FAM3B-204ENST00000398652 HUNKP57058 714 aa18.49■□□□□ 0.55
FAM3B-204ENST00000398652 HIRAP54198 1017 aaPredicted RBP18.48■□□□□ 0.55
FAM3B-204ENST00000398652 ERVV-1B6SEH8 477 aa18.47■□□□□ 0.55
FAM3B-204ENST00000398652 PHACTR3Q96KR7 559 aa18.47■□□□□ 0.55
FAM3B-204ENST00000398652 TMX4Q9H1E5 349 aaPredicted RBP18.47■□□□□ 0.55
FAM3B-204ENST00000398652 LAMB2P55268 1798 aa18.46■□□□□ 0.55
FAM3B-204ENST00000398652 FAM155AB1AL88 458 aaPredicted RBP18.46■□□□□ 0.55
FAM3B-204ENST00000398652 RGMBQ6NW40 437 aa18.46■□□□□ 0.55
FAM3B-204ENST00000398652 SUPT20HQ8NEM7 779 aa18.46■□□□□ 0.55
FAM3B-204ENST00000398652 TRPM4Q8TD43 1214 aa18.46■□□□□ 0.55
FAM3B-204ENST00000398652 BCL2L13Q9BXK5 485 aa18.46■□□□□ 0.55
FAM3B-204ENST00000398652 ATP6V0A2Q9Y487 856 aa18.46■□□□□ 0.55
FAM3B-204ENST00000398652 RTFDC1Q9BY42 306 aaPredicted RBP18.45■□□□□ 0.54
FAM3B-204ENST00000398652 MAP3K15Q6ZN16 1313 aa18.45■□□□□ 0.54
FAM3B-204ENST00000398652 UBN2Q6ZU65 1347 aa18.45■□□□□ 0.54
FAM3B-204ENST00000398652 ANKRD36CQ5JPF3 1778 aa18.45■□□□□ 0.54
FAM3B-204ENST00000398652 PRKAR2BP31323 418 aa18.44■□□□□ 0.54
FAM3B-204ENST00000398652 TNIP1Q15025 636 aa18.44■□□□□ 0.54
FAM3B-204ENST00000398652 CC2D1BQ5T0F9 858 aaKnown RBP18.44■□□□□ 0.54
FAM3B-204ENST00000398652 RTF1Q92541 710 aaKnown RBP18.44■□□□□ 0.54
FAM3B-204ENST00000398652 CCDC102AQ96A19 550 aa18.44■□□□□ 0.54
FAM3B-204ENST00000398652 RNF186Q9NXI6 227 aa18.44■□□□□ 0.54
FAM3B-204ENST00000398652 KDM3BQ7LBC6 1761 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms