RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 LRRC2Q9BYS8 371 aa13.46□□□□□ -0.25
PCDHGA8-201ENST00000398604 CWC25Q9NXE8 425 aaPredicted RBP13.46□□□□□ -0.25
PCDHGA8-201ENST00000398604 CHPF2Q9P2E5 772 aa13.46□□□□□ -0.25
PCDHGA8-201ENST00000398604 STX8Q9UNK0 236 aa13.46□□□□□ -0.25
PCDHGA8-201ENST00000398604 SSR1P43307 286 aaKnown RBP13.46□□□□□ -0.25
PCDHGA8-201ENST00000398604 CENPHQ9H3R5 247 aa13.46□□□□□ -0.25
PCDHGA8-201ENST00000398604 SLC12A7Q9Y666 1083 aa13.46□□□□□ -0.25
PCDHGA8-201ENST00000398604 SBNO2Q9Y2G9 1366 aa13.46□□□□□ -0.26
PCDHGA8-201ENST00000398604 GOLGA8BA8MQT2 603 aa13.46□□□□□ -0.26
PCDHGA8-201ENST00000398604 SNRPA1P09661 255 aaKnown RBP13.46□□□□□ -0.26
PCDHGA8-201ENST00000398604 LTKP29376 864 aa13.46□□□□□ -0.26
PCDHGA8-201ENST00000398604 SETQ01105 290 aaPredicted RBP13.46□□□□□ -0.26
PCDHGA8-201ENST00000398604 FEZ1Q99689 392 aa13.46□□□□□ -0.26
PCDHGA8-201ENST00000398604 DIP2BQ9P265 1576 aa13.45□□□□□ -0.26
PCDHGA8-201ENST00000398604 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
PCDHGA8-201ENST00000398604 NBPF6Q5VWK0 638 aa13.45□□□□□ -0.26
PCDHGA8-201ENST00000398604 NBPF5PQ86XG9 351 aaPredicted RBP13.45□□□□□ -0.26
PCDHGA8-201ENST00000398604 NBPF4Q96M43 638 aa13.45□□□□□ -0.26
PCDHGA8-201ENST00000398604 ACBD3Q9H3P7 528 aa13.45□□□□□ -0.26
PCDHGA8-201ENST00000398604 LIG1P18858 919 aa13.45□□□□□ -0.26
PCDHGA8-201ENST00000398604 ZNF287Q9HBT7 754 aa13.45□□□□□ -0.26
PCDHGA8-201ENST00000398604 ZFYVE9O95405 1425 aa13.45□□□□□ -0.26
PCDHGA8-201ENST00000398604 BIN1O00499 593 aa13.45□□□□□ -0.26
PCDHGA8-201ENST00000398604 SCLT1Q96NL6 688 aa13.45□□□□□ -0.26
PCDHGA8-201ENST00000398604 ASXL1Q8IXJ9 1541 aa13.45□□□□□ -0.26
PCDHGA8-201ENST00000398604 SEC24BO95487 1268 aa13.44□□□□□ -0.26
PCDHGA8-201ENST00000398604 SSFA2P28290 1259 aa13.44□□□□□ -0.26
PCDHGA8-201ENST00000398604 ISM2Q6H9L7 571 aa13.44□□□□□ -0.26
PCDHGA8-201ENST00000398604 WASF1Q92558 559 aa13.44□□□□□ -0.26
PCDHGA8-201ENST00000398604 NPHP4O75161 1426 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA8-201ENST00000398604 HELBQ8NG08 1087 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA8-201ENST00000398604 LMTK2Q8IWU2 1503 aa13.44□□□□□ -0.26
PCDHGA8-201ENST00000398604 DNA2P51530 1060 aa13.44□□□□□ -0.26
PCDHGA8-201ENST00000398604 MAP3K11Q16584 847 aa13.44□□□□□ -0.26
PCDHGA8-201ENST00000398604 CCDC181Q5TID7 509 aa13.44□□□□□ -0.26
PCDHGA8-201ENST00000398604 LMBR1LQ6UX01 489 aa13.44□□□□□ -0.26
PCDHGA8-201ENST00000398604 DACH1Q9UI36 760 aa13.44□□□□□ -0.26
PCDHGA8-201ENST00000398604 TSPY2A6NKD2 308 aa13.44□□□□□ -0.26
PCDHGA8-201ENST00000398604 IDEP14735 1019 aa13.44□□□□□ -0.26
PCDHGA8-201ENST00000398604 C8orf58Q8NAV2 365 aa13.44□□□□□ -0.26
PCDHGA8-201ENST00000398604 ZCRB1Q8TBF4 217 aaKnown RBP13.44□□□□□ -0.26
PCDHGA8-201ENST00000398604 RLBP1P12271 317 aa13.43□□□□□ -0.26
PCDHGA8-201ENST00000398604 NFATC2IPQ8NCF5 419 aa13.43□□□□□ -0.26
PCDHGA8-201ENST00000398604 TBC1D32Q96NH3 1257 aa13.43□□□□□ -0.26
PCDHGA8-201ENST00000398604 USP16Q9Y5T5 823 aa13.43□□□□□ -0.26
PCDHGA8-201ENST00000398604 CFAP65Q6ZU64 1925 aaKnown RBP13.43□□□□□ -0.26
PCDHGA8-201ENST00000398604 GOLGA8AA7E2F4 631 aa13.43□□□□□ -0.26
PCDHGA8-201ENST00000398604 NLRP5P59047 1200 aa13.43□□□□□ -0.26
PCDHGA8-201ENST00000398604 GRM1Q13255 1194 aa13.43□□□□□ -0.26
PCDHGA8-201ENST00000398604 CDC5LQ99459 802 aaKnown RBP13.43□□□□□ -0.26
PCDHGA8-201ENST00000398604 CCDC196A0A1B0GTZ2 297 aa13.43□□□□□ -0.26
PCDHGA8-201ENST00000398604 DHX37Q8IY37 1157 aaKnown RBP13.43□□□□□ -0.26
PCDHGA8-201ENST00000398604 LMTK3Q96Q04 1460 aa13.43□□□□□ -0.26
PCDHGA8-201ENST00000398604 TBC1D9Q6ZT07 1266 aa13.43□□□□□ -0.26
PCDHGA8-201ENST00000398604 CPLX3Q8WVH0 158 aa13.43□□□□□ -0.26
PCDHGA8-201ENST00000398604 LIMCH1Q9UPQ0 1083 aa13.43□□□□□ -0.26
PCDHGA8-201ENST00000398604 CCDC194A0A1B0GVG4 234 aa13.42□□□□□ -0.26
PCDHGA8-201ENST00000398604 ANKRD62A6NC57 917 aa13.42□□□□□ -0.26
PCDHGA8-201ENST00000398604 RDXP35241 583 aaKnown RBP13.42□□□□□ -0.26
PCDHGA8-201ENST00000398604 ATP6V1AP38606 617 aa13.42□□□□□ -0.26
PCDHGA8-201ENST00000398604 CCDC112Q8NEF3 446 aa13.42□□□□□ -0.26
PCDHGA8-201ENST00000398604 PA2G4Q9UQ80 394 aaKnown RBP13.42□□□□□ -0.26
PCDHGA8-201ENST00000398604 E9PCH4 1651 aa13.42□□□□□ -0.26
PCDHGA8-201ENST00000398604 KIF1BO60333 1816 aa13.42□□□□□ -0.26
PCDHGA8-201ENST00000398604 NPC1L1Q9UHC9 1359 aa13.42□□□□□ -0.26
PCDHGA8-201ENST00000398604 RHPN1Q8TCX5 695 aa13.41□□□□□ -0.26
PCDHGA8-201ENST00000398604 INO80Q9ULG1 1556 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA8-201ENST00000398604 TAF3Q5VWG9 929 aa13.41□□□□□ -0.26
PCDHGA8-201ENST00000398604 LUC7LQ9NQ29 371 aaKnown RBP13.41□□□□□ -0.26
PCDHGA8-201ENST00000398604 CIZ1Q9ULV3 898 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA8-201ENST00000398604 JAG2Q9Y219 1238 aa13.41□□□□□ -0.26
PCDHGA8-201ENST00000398604 TMEM67Q5HYA8 995 aa13.41□□□□□ -0.26
PCDHGA8-201ENST00000398604 NECAB1Q8N987 351 aa13.41□□□□□ -0.26
PCDHGA8-201ENST00000398604 CLTCL1P53675 1640 aa13.41□□□□□ -0.26
PCDHGA8-201ENST00000398604 TAX1BP1Q86VP1 789 aa13.41□□□□□ -0.26
PCDHGA8-201ENST00000398604 C16orf71Q8IYS4 520 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA8-201ENST00000398604 ORC3Q9UBD5 711 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA8-201ENST00000398604 H0YHG0 523 aa13.4□□□□□ -0.26
PCDHGA8-201ENST00000398604 FAM193AP78312 1265 aa13.4□□□□□ -0.26
PCDHGA8-201ENST00000398604 DIP2CQ9Y2E4 1556 aa13.4□□□□□ -0.26
PCDHGA8-201ENST00000398604 A2ML1A8K2U0 1454 aa13.4□□□□□ -0.26
PCDHGA8-201ENST00000398604 PLEKHG3A1L390 1219 aa13.4□□□□□ -0.26
PCDHGA8-201ENST00000398604 ESPNB1AK53 854 aa13.4□□□□□ -0.26
PCDHGA8-201ENST00000398604 ARHGAP29Q52LW3 1261 aa13.4□□□□□ -0.26
PCDHGA8-201ENST00000398604 BRF1Q92994 677 aa13.4□□□□□ -0.26
PCDHGA8-201ENST00000398604 SPTY2D1Q68D10 685 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA8-201ENST00000398604 EPB41L2O43491 1005 aaKnown RBP13.4□□□□□ -0.27
PCDHGA8-201ENST00000398604 IARSP41252 1262 aaKnown RBP13.4□□□□□ -0.27
PCDHGA8-201ENST00000398604 DDB1Q16531 1140 aa13.4□□□□□ -0.27
PCDHGA8-201ENST00000398604 EVI5LQ96CN4 794 aa13.4□□□□□ -0.27
PCDHGA8-201ENST00000398604 TEX13AQ9BXU3 409 aaPredicted RBP13.4□□□□□ -0.27
PCDHGA8-201ENST00000398604 NIP7Q9Y221 180 aaKnown RBP eCLIP13.4□□□□□ -0.27
PCDHGA8-201ENST00000398604 CATIPQ7Z7H3 387 aa13.39□□□□□ -0.27
PCDHGA8-201ENST00000398604 TSPYL6Q8N831 410 aa13.39□□□□□ -0.27
PCDHGA8-201ENST00000398604 TSPYL1Q9H0U9 437 aa13.39□□□□□ -0.27
PCDHGA8-201ENST00000398604 PIK3C2GO75747 1445 aa13.39□□□□□ -0.27
PCDHGA8-201ENST00000398604 EIF4A2Q14240 407 aaKnown RBP13.39□□□□□ -0.27
PCDHGA8-201ENST00000398604 SCAND2PQ9GZW5 306 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA8-201ENST00000398604 POLKQ9UBT6 870 aa13.39□□□□□ -0.27
PCDHGA8-201ENST00000398604 BLMP54132 1417 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms