RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 NCBP1Q09161 790 aaKnown RBP10.4□□□□□ -0.74
TRPM1-202ENST00000397795 MICAL1Q8TDZ2 1067 aa10.4□□□□□ -0.74
TRPM1-202ENST00000397795 IQCGQ9H095 443 aaKnown RBP10.4□□□□□ -0.74
TRPM1-202ENST00000397795 ANKRD7Q92527 254 aa10.4□□□□□ -0.74
TRPM1-202ENST00000397795 GPRASP1Q5JY77 1395 aa10.4□□□□□ -0.74
TRPM1-202ENST00000397795 CEBPZQ03701 1054 aaKnown RBP10.4□□□□□ -0.74
TRPM1-202ENST00000397795 EXOSC9Q06265 439 aaKnown RBP10.4□□□□□ -0.74
TRPM1-202ENST00000397795 CTAGE5O15320 804 aa10.4□□□□□ -0.75
TRPM1-202ENST00000397795 RAD21O60216 631 aa10.4□□□□□ -0.75
TRPM1-202ENST00000397795 MYCNP04198 464 aaPredicted RBP10.4□□□□□ -0.75
TRPM1-202ENST00000397795 SLFN14P0C7P3 912 aa10.4□□□□□ -0.75
TRPM1-202ENST00000397795 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.4□□□□□ -0.75
TRPM1-202ENST00000397795 NUF2Q9BZD4 464 aa10.4□□□□□ -0.75
TRPM1-202ENST00000397795 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.4□□□□□ -0.75
TRPM1-202ENST00000397795 CETN3O15182 167 aa10.39□□□□□ -0.75
TRPM1-202ENST00000397795 ZNF165P49910 485 aa10.39□□□□□ -0.75
TRPM1-202ENST00000397795 ZNF710Q8N1W2 664 aa10.39□□□□□ -0.75
TRPM1-202ENST00000397795 EIF2AQ9BY44 585 aaKnown RBP10.39□□□□□ -0.75
TRPM1-202ENST00000397795 SENP3Q9H4L4 574 aaPredicted RBP10.39□□□□□ -0.75
TRPM1-202ENST00000397795 SPTLC3Q9NUV7 552 aa10.39□□□□□ -0.75
TRPM1-202ENST00000397795 PTPN23Q9H3S7 1636 aa10.39□□□□□ -0.75
TRPM1-202ENST00000397795 CCDC196A0A1B0GTZ2 297 aa10.39□□□□□ -0.75
TRPM1-202ENST00000397795 SSBP05455 408 aaKnown RBP eCLIP10.39□□□□□ -0.75
TRPM1-202ENST00000397795 G3BP1Q13283 466 aaKnown RBP eCLIP10.39□□□□□ -0.75
TRPM1-202ENST00000397795 SYT10Q6XYQ8 523 aa10.39□□□□□ -0.75
TRPM1-202ENST00000397795 UIMC1Q96RL1 719 aa10.39□□□□□ -0.75
TRPM1-202ENST00000397795 PRC1O43663 620 aa10.39□□□□□ -0.75
TRPM1-202ENST00000397795 PSMC4P43686 418 aa10.39□□□□□ -0.75
TRPM1-202ENST00000397795 VCX3AQ9NNX9 186 aa10.39□□□□□ -0.75
TRPM1-202ENST00000397795 DDX19AQ9NUU7 478 aaKnown RBP10.39□□□□□ -0.75
TRPM1-202ENST00000397795 THEGQ9P2T0 379 aa10.39□□□□□ -0.75
TRPM1-202ENST00000397795 MACROD2A1Z1Q3 448 aa10.39□□□□□ -0.75
TRPM1-202ENST00000397795 CEP85LQ5SZL2 805 aa10.39□□□□□ -0.75
TRPM1-202ENST00000397795 INTS8Q75QN2 995 aaKnown RBP10.39□□□□□ -0.75
TRPM1-202ENST00000397795 GOLGA1Q92805 767 aa10.39□□□□□ -0.75
TRPM1-202ENST00000397795 TAF7Q15545 349 aaPredicted RBP10.38□□□□□ -0.75
TRPM1-202ENST00000397795 CCDC12Q8WUD4 166 aaPredicted RBP10.38□□□□□ -0.75
TRPM1-202ENST00000397795 ZSCAN31Q96LW9 406 aaPredicted RBP10.38□□□□□ -0.75
TRPM1-202ENST00000397795 ZNF215Q9UL58 517 aaPredicted RBP10.38□□□□□ -0.75
TRPM1-202ENST00000397795 PPP6R1Q9UPN7 881 aa10.38□□□□□ -0.75
TRPM1-202ENST00000397795 GIGYF1O75420 1035 aaPredicted RBP10.38□□□□□ -0.75
TRPM1-202ENST00000397795 SLC8A1P32418 973 aa10.38□□□□□ -0.75
TRPM1-202ENST00000397795 PIK3R5Q8WYR1 880 aa10.38□□□□□ -0.75
TRPM1-202ENST00000397795 NUCKS1Q9H1E3 243 aaKnown RBP10.38□□□□□ -0.75
TRPM1-202ENST00000397795 ALDH3A1P30838 453 aa10.38□□□□□ -0.75
TRPM1-202ENST00000397795 PPP2R5AQ15172 486 aa10.38□□□□□ -0.75
TRPM1-202ENST00000397795 TMEM132AQ24JP5 1023 aa10.38□□□□□ -0.75
TRPM1-202ENST00000397795 GPT2Q8TD30 523 aa10.38□□□□□ -0.75
TRPM1-202ENST00000397795 BMP2KQ9NSY1 1161 aaPredicted RBP10.38□□□□□ -0.75
TRPM1-202ENST00000397795 ANKRD36BQ8N2N9 1353 aa10.38□□□□□ -0.75
TRPM1-202ENST00000397795 POLA1P09884 1462 aaPredicted RBP10.38□□□□□ -0.75
TRPM1-202ENST00000397795 OAS2P29728 719 aaKnown RBP10.38□□□□□ -0.75
TRPM1-202ENST00000397795 COG7P83436 770 aa10.38□□□□□ -0.75
TRPM1-202ENST00000397795 CAMK4Q16566 473 aa10.38□□□□□ -0.75
TRPM1-202ENST00000397795 TMX3Q96JJ7 454 aa10.38□□□□□ -0.75
TRPM1-202ENST00000397795 LARSQ9P2J5 1176 aaKnown RBP10.38□□□□□ -0.75
TRPM1-202ENST00000397795 KIAA1107Q9UPP5 1409 aa10.38□□□□□ -0.75
TRPM1-202ENST00000397795 CCDC57Q2TAC2 916 aa10.38□□□□□ -0.75
TRPM1-202ENST00000397795 TMEM57Q8N5G2 664 aa10.38□□□□□ -0.75
TRPM1-202ENST00000397795 RNF10Q8N5U6 811 aaKnown RBP10.38□□□□□ -0.75
TRPM1-202ENST00000397795 CHMP7Q8WUX9 453 aaPredicted RBP10.38□□□□□ -0.75
TRPM1-202ENST00000397795 ATP8B1O43520 1251 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 SF3B2Q13435 895 aaKnown RBP10.37□□□□□ -0.75
TRPM1-202ENST00000397795 HSP90AA5PQ58FG0 334 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 NLRP5P59047 1200 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 TRPC3Q13507 836 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 SLC4A8Q2Y0W8 1093 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 WDR78Q5VTH9 848 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 LARP1BQ659C4 914 aaKnown RBP10.37□□□□□ -0.75
TRPM1-202ENST00000397795 MCTP2Q6DN12 878 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 CLEC17AQ6ZS10 378 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 HDXQ7Z353 690 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 ARHGAP24Q8N264 748 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 CTNNBL1Q8WYA6 563 aaPredicted RBP10.37□□□□□ -0.75
TRPM1-202ENST00000397795 JARID2Q92833 1246 aaPredicted RBP10.37□□□□□ -0.75
TRPM1-202ENST00000397795 TPX2Q9ULW0 747 aaKnown RBP10.37□□□□□ -0.75
TRPM1-202ENST00000397795 ZMYM4Q5VZL5 1548 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 PIP4K2BP78356 416 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 SATB1Q01826 763 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 ZGPATQ8N5A5 531 aaKnown RBP10.37□□□□□ -0.75
TRPM1-202ENST00000397795 VEZTQ9HBM0 779 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 CYP46A1Q9Y6A2 500 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 RAD50Q92878 1312 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 PEX19P40855 299 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 GNG11P61952 73 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 SCAND2PQ9GZW5 306 aaPredicted RBP10.37□□□□□ -0.75
TRPM1-202ENST00000397795 XAB2Q9HCS7 855 aaKnown RBP10.37□□□□□ -0.75
TRPM1-202ENST00000397795 RASAL2Q9UJF2 1139 aa10.37□□□□□ -0.75
TRPM1-202ENST00000397795 LRRD1A4D1F6 860 aa10.36□□□□□ -0.75
TRPM1-202ENST00000397795 GUCY2CP25092 1073 aa10.36□□□□□ -0.75
TRPM1-202ENST00000397795 MAGEA9P43362 315 aa10.36□□□□□ -0.75
TRPM1-202ENST00000397795 IFI16Q16666 785 aaKnown RBP10.36□□□□□ -0.75
TRPM1-202ENST00000397795 SOX12O15370 315 aa10.36□□□□□ -0.75
TRPM1-202ENST00000397795 CYP2C19P33261 490 aa10.36□□□□□ -0.75
TRPM1-202ENST00000397795 AFAP1L1Q8TED9 768 aa10.36□□□□□ -0.75
TRPM1-202ENST00000397795 PYCARDQ9ULZ3 195 aa10.36□□□□□ -0.75
TRPM1-202ENST00000397795 ELP1O95163 1332 aa10.36□□□□□ -0.75
TRPM1-202ENST00000397795 CACNA2D4Q7Z3S7 1137 aa10.36□□□□□ -0.75
TRPM1-202ENST00000397795 GFAPP14136 432 aa10.36□□□□□ -0.75
TRPM1-202ENST00000397795 ATP2B1P20020 1258 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms