RNA–Protein interactions for RNA: ENST00000397495.8

PPM1F-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2 BASIC

Gene PPM1F, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-202ENST00000397495 RTL5Q5HYW3 569 aaPredicted RBP18.98■□□□□ 0.63
PPM1F-202ENST00000397495 PNMA6EA0A0J9YXQ4 647 aa18.98■□□□□ 0.63
PPM1F-202ENST00000397495 CAMTA2O94983 1202 aa18.98■□□□□ 0.63
PPM1F-202ENST00000397495 ATP8B2P98198 1209 aa18.98■□□□□ 0.63
PPM1F-202ENST00000397495 HSP90AB3PQ58FF7 597 aa18.98■□□□□ 0.63
PPM1F-202ENST00000397495 PLEKHM2Q8IWE5 1019 aa18.98■□□□□ 0.63
PPM1F-202ENST00000397495 PROM2Q8N271 834 aa18.98■□□□□ 0.63
PPM1F-202ENST00000397495 AK7Q96M32 723 aa18.98■□□□□ 0.63
PPM1F-202ENST00000397495 DAXXQ9UER7 740 aaPredicted RBP18.98■□□□□ 0.63
PPM1F-202ENST00000397495 HDAC5Q9UQL6 1122 aa18.98■□□□□ 0.63
PPM1F-202ENST00000397495 RTCBQ9Y3I0 505 aaKnown RBP18.98■□□□□ 0.63
PPM1F-202ENST00000397495 PLSCR1O15162 318 aa18.97■□□□□ 0.63
PPM1F-202ENST00000397495 AMIGO3Q86WK7 504 aa18.97■□□□□ 0.63
PPM1F-202ENST00000397495 BCORQ6W2J9 1755 aa18.97■□□□□ 0.63
PPM1F-202ENST00000397495 EIF5BO60841 1220 aaKnown RBP18.96■□□□□ 0.63
PPM1F-202ENST00000397495 TRIM28Q13263 835 aaKnown RBP18.96■□□□□ 0.63
PPM1F-202ENST00000397495 BECN1Q14457 450 aa18.96■□□□□ 0.63
PPM1F-202ENST00000397495 KAZALD1Q96I82 304 aa18.96■□□□□ 0.63
PPM1F-202ENST00000397495 PHF14O94880 888 aa18.96■□□□□ 0.63
PPM1F-202ENST00000397495 RBM25P49756 843 aaKnown RBP18.96■□□□□ 0.63
PPM1F-202ENST00000397495 SF3B2Q13435 895 aaKnown RBP18.96■□□□□ 0.63
PPM1F-202ENST00000397495 PPP1R42Q7Z4L9 355 aa18.96■□□□□ 0.63
PPM1F-202ENST00000397495 C22orf23Q9BZE7 217 aa18.96■□□□□ 0.63
PPM1F-202ENST00000397495 BICC1Q9H694 974 aaKnown RBP18.96■□□□□ 0.63
PPM1F-202ENST00000397495 H7C1W4 665 aa18.95■□□□□ 0.62
PPM1F-202ENST00000397495 NLRP10Q86W26 655 aa18.95■□□□□ 0.62
PPM1F-202ENST00000397495 SRGAP3O43295 1099 aa18.94■□□□□ 0.62
PPM1F-202ENST00000397495 CASP7P55210 303 aa18.94■□□□□ 0.62
PPM1F-202ENST00000397495 UBR3Q6ZT12 1888 aa18.94■□□□□ 0.62
PPM1F-202ENST00000397495 EPHA10Q5JZY3 1008 aa18.93■□□□□ 0.62
PPM1F-202ENST00000397495 ZNF34Q8IZ26 560 aa18.93■□□□□ 0.62
PPM1F-202ENST00000397495 ARHGEF1Q92888 912 aaKnown RBP18.93■□□□□ 0.62
PPM1F-202ENST00000397495 OSBPL3Q9H4L5 887 aa18.93■□□□□ 0.62
PPM1F-202ENST00000397495 SCN7AQ01118 1682 aa18.93■□□□□ 0.62
PPM1F-202ENST00000397495 C4AP0C0L4 1744 aa18.93■□□□□ 0.62
PPM1F-202ENST00000397495 SSH3Q8TE77 659 aa18.93■□□□□ 0.62
PPM1F-202ENST00000397495 SRP68Q9UHB9 627 aaKnown RBP18.93■□□□□ 0.62
PPM1F-202ENST00000397495 ZNF652Q9Y2D9 606 aa18.93■□□□□ 0.62
PPM1F-202ENST00000397495 UBN2Q6ZU65 1347 aa18.93■□□□□ 0.62
PPM1F-202ENST00000397495 TRAPPC3LQ5T215 181 aa18.92■□□□□ 0.62
PPM1F-202ENST00000397495 USPL1Q5W0Q7 1092 aa18.92■□□□□ 0.62
PPM1F-202ENST00000397495 FAM89AQ96GI7 184 aa18.92■□□□□ 0.62
PPM1F-202ENST00000397495 NARFQ9UHQ1 456 aa18.92■□□□□ 0.62
PPM1F-202ENST00000397495 APBB1O00213 710 aa18.91■□□□□ 0.62
PPM1F-202ENST00000397495 ZPR1O75312 459 aa18.91■□□□□ 0.62
PPM1F-202ENST00000397495 SLC4A3P48751 1232 aa18.91■□□□□ 0.62
PPM1F-202ENST00000397495 MTX1Q13505 466 aa18.91■□□□□ 0.62
PPM1F-202ENST00000397495 POLA2Q14181 598 aa18.91■□□□□ 0.62
PPM1F-202ENST00000397495 TTC22Q5TAA0 569 aa18.91■□□□□ 0.62
PPM1F-202ENST00000397495 EXOC6BQ9Y2D4 811 aa18.91■□□□□ 0.62
PPM1F-202ENST00000397495 FAM177BA6PVY3 158 aa18.91■□□□□ 0.62
PPM1F-202ENST00000397495 PCCAP05165 728 aaPredicted RBP18.91■□□□□ 0.62
PPM1F-202ENST00000397495 RFC4P35249 363 aa18.91■□□□□ 0.62
PPM1F-202ENST00000397495 ZBTB38Q8NAP3 1195 aaPredicted RBP18.91■□□□□ 0.62
PPM1F-202ENST00000397495 BCL11AQ9H165 835 aa18.91■□□□□ 0.62
PPM1F-202ENST00000397495 TRMT112Q9UI30 125 aaKnown RBP18.91■□□□□ 0.62
PPM1F-202ENST00000397495 NIP7Q9Y221 180 aaKnown RBP eCLIP18.91■□□□□ 0.62
PPM1F-202ENST00000397495 RGPD3A6NKT7 1758 aaPredicted RBP18.91■□□□□ 0.62
PPM1F-202ENST00000397495 RGPD4Q7Z3J3 1758 aa18.91■□□□□ 0.62
PPM1F-202ENST00000397495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.9■□□□□ 0.62
PPM1F-202ENST00000397495 GSPT1P15170 499 aaKnown RBP18.9■□□□□ 0.62
PPM1F-202ENST00000397495 CLEC4GQ6UXB4 293 aa18.9■□□□□ 0.62
PPM1F-202ENST00000397495 SYNE4Q8N205 404 aa18.9■□□□□ 0.62
PPM1F-202ENST00000397495 CDC45O75419 566 aa18.89■□□□□ 0.61
PPM1F-202ENST00000397495 MFAP1P55081 439 aaKnown RBP18.89■□□□□ 0.61
PPM1F-202ENST00000397495 SUSD4Q5VX71 490 aa18.89■□□□□ 0.61
PPM1F-202ENST00000397495 BCL2L12Q9HB09 334 aa18.89■□□□□ 0.61
PPM1F-202ENST00000397495 HMGB2P26583 209 aaKnown RBP18.88■□□□□ 0.61
PPM1F-202ENST00000397495 FOXO4P98177 505 aa18.88■□□□□ 0.61
PPM1F-202ENST00000397495 EN1Q05925 392 aaPredicted RBP18.88■□□□□ 0.61
PPM1F-202ENST00000397495 BICDL1Q6ZP65 573 aa18.88■□□□□ 0.61
PPM1F-202ENST00000397495 TBC1D9Q6ZT07 1266 aa18.88■□□□□ 0.61
PPM1F-202ENST00000397495 SURF6O75683 361 aaKnown RBP18.88■□□□□ 0.61
PPM1F-202ENST00000397495 ADRA2BP18089 450 aa18.88■□□□□ 0.61
PPM1F-202ENST00000397495 PARP10Q53GL7 1025 aa18.88■□□□□ 0.61
PPM1F-202ENST00000397495 LMBR1LQ6UX01 489 aa18.88■□□□□ 0.61
PPM1F-202ENST00000397495 SALL3Q9BXA9 1300 aa18.88■□□□□ 0.61
PPM1F-202ENST00000397495 TUBGCP6Q96RT7 1819 aa18.87■□□□□ 0.61
PPM1F-202ENST00000397495 EZH2Q15910 746 aaKnown RBP18.87■□□□□ 0.61
PPM1F-202ENST00000397495 ZNF827Q17R98 1081 aa18.87■□□□□ 0.61
PPM1F-202ENST00000397495 RABL6Q3YEC7 729 aaPredicted RBP18.87■□□□□ 0.61
PPM1F-202ENST00000397495 TBC1D9BQ66K14 1250 aa18.87■□□□□ 0.61
PPM1F-202ENST00000397495 CCDC125Q86Z20 511 aa18.87■□□□□ 0.61
PPM1F-202ENST00000397495 TBC1D2Q9BYX2 928 aa18.87■□□□□ 0.61
PPM1F-202ENST00000397495 CHMP3Q9Y3E7 222 aa18.87■□□□□ 0.61
PPM1F-202ENST00000397495 USP42Q9H9J4 1324 aaKnown RBP18.87■□□□□ 0.61
PPM1F-202ENST00000397495 SSFA2P28290 1259 aa18.86■□□□□ 0.61
PPM1F-202ENST00000397495 C16orf71Q8IYS4 520 aaPredicted RBP18.86■□□□□ 0.61
PPM1F-202ENST00000397495 UTP14AQ9BVJ6 771 aaKnown RBP18.86■□□□□ 0.61
PPM1F-202ENST00000397495 TFCP2L1Q9NZI6 479 aa18.86■□□□□ 0.61
PPM1F-202ENST00000397495 PA2G4Q9UQ80 394 aaKnown RBP18.86■□□□□ 0.61
PPM1F-202ENST00000397495 CDHR2Q9BYE9 1310 aa18.86■□□□□ 0.61
PPM1F-202ENST00000397495 SMARCA5O60264 1052 aaPredicted RBP18.86■□□□□ 0.61
PPM1F-202ENST00000397495 BAG6P46379 1132 aa18.86■□□□□ 0.61
PPM1F-202ENST00000397495 NBR1Q14596 966 aa18.86■□□□□ 0.61
PPM1F-202ENST00000397495 UPF1Q92900 1129 aaKnown RBP eCLIP18.86■□□□□ 0.612e-13■■■■■ 28.8
PPM1F-202ENST00000397495 MYH3P11055 1940 aa18.85■□□□□ 0.61
PPM1F-202ENST00000397495 IRS4O14654 1257 aaPredicted RBP18.85■□□□□ 0.61
PPM1F-202ENST00000397495 RGL2O15211 777 aa18.85■□□□□ 0.61
PPM1F-202ENST00000397495 SNX21Q969T3 373 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms