RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 PARP10Q53GL7 1025 aa29.83■■■□□ 2.37
TSPAN4-203ENST00000397397 CCDC191Q8NCU4 936 aa29.83■■■□□ 2.37
TSPAN4-203ENST00000397397 CWC25Q9NXE8 425 aaPredicted RBP29.83■■■□□ 2.37
TSPAN4-203ENST00000397397 TM4SF1P30408 202 aa29.82■■■□□ 2.36
TSPAN4-203ENST00000397397 ITPRIPQ8IWB1 547 aa29.82■■■□□ 2.36
TSPAN4-203ENST00000397397 SGIP1Q9BQI5 828 aa29.82■■■□□ 2.36
TSPAN4-203ENST00000397397 FAM177BA6PVY3 158 aa29.81■■■□□ 2.36
TSPAN4-203ENST00000397397 PPP1R1BQ9UD71 204 aaPredicted RBP29.81■■■□□ 2.36
TSPAN4-203ENST00000397397 COG6Q9Y2V7 657 aa29.81■■■□□ 2.36
TSPAN4-203ENST00000397397 GCKRQ14397 625 aa29.8■■■□□ 2.36
TSPAN4-203ENST00000397397 COL24A1Q17RW2 1714 aa29.8■■■□□ 2.36
TSPAN4-203ENST00000397397 SUSD4Q5VX71 490 aa29.79■■■□□ 2.36
TSPAN4-203ENST00000397397 PPP1R42Q7Z4L9 355 aa29.79■■■□□ 2.36
TSPAN4-203ENST00000397397 CARMIL3Q8ND23 1372 aa29.79■■■□□ 2.36
TSPAN4-203ENST00000397397 MMP10P09238 476 aa29.79■■■□□ 2.36
TSPAN4-203ENST00000397397 MVPQ14764 893 aaKnown RBP29.79■■■□□ 2.36
TSPAN4-203ENST00000397397 DDR1Q08345 913 aa29.78■■■□□ 2.36
TSPAN4-203ENST00000397397 UTP14AQ9BVJ6 771 aaKnown RBP29.78■■■□□ 2.36
TSPAN4-203ENST00000397397 NBPF5PQ86XG9 351 aaPredicted RBP29.77■■■□□ 2.36
TSPAN4-203ENST00000397397 C9orf78Q9NZ63 289 aaPredicted RBP29.77■■■□□ 2.36
TSPAN4-203ENST00000397397 TRMT112Q9UI30 125 aaKnown RBP29.77■■■□□ 2.36
TSPAN4-203ENST00000397397 POLRMTO00411 1230 aaKnown RBP29.76■■■□□ 2.35
TSPAN4-203ENST00000397397 PARP3Q9Y6F1 533 aa29.76■■■□□ 2.35
TSPAN4-203ENST00000397397 IBTKQ9P2D0 1353 aaPredicted RBP29.75■■■□□ 2.35
TSPAN4-203ENST00000397397 SERPINB2P05120 415 aa29.75■■■□□ 2.35
TSPAN4-203ENST00000397397 IRX6P78412 446 aaPredicted RBP29.75■■■□□ 2.35
TSPAN4-203ENST00000397397 NYXQ9GZU5 481 aa29.75■■■□□ 2.35
TSPAN4-203ENST00000397397 GRM8O00222 908 aa29.74■■■□□ 2.35
TSPAN4-203ENST00000397397 NTSR2O95665 410 aa29.74■■■□□ 2.35
TSPAN4-203ENST00000397397 JARID2Q92833 1246 aaPredicted RBP29.74■■■□□ 2.35
TSPAN4-203ENST00000397397 CRBNQ96SW2 442 aa29.74■■■□□ 2.35
TSPAN4-203ENST00000397397 RTL5Q5HYW3 569 aaPredicted RBP29.73■■■□□ 2.35
TSPAN4-203ENST00000397397 ZBTB38Q8NAP3 1195 aaPredicted RBP29.73■■■□□ 2.35
TSPAN4-203ENST00000397397 USP44Q9H0E7 712 aa29.73■■■□□ 2.35
TSPAN4-203ENST00000397397 DDX19BQ9UMR2 479 aa29.73■■■□□ 2.35
TSPAN4-203ENST00000397397 NPHP1O15259 732 aa29.72■■■□□ 2.35
TSPAN4-203ENST00000397397 PCCAP05165 728 aaPredicted RBP29.72■■■□□ 2.35
TSPAN4-203ENST00000397397 TPTE2Q6XPS3 522 aa29.72■■■□□ 2.35
TSPAN4-203ENST00000397397 FAM89AQ96GI7 184 aa29.72■■■□□ 2.35
TSPAN4-203ENST00000397397 H7C1W4 665 aa29.71■■■□□ 2.35
TSPAN4-203ENST00000397397 GTF2E1P29083 439 aaPredicted RBP29.71■■■□□ 2.35
TSPAN4-203ENST00000397397 UBE3BQ7Z3V4 1068 aa29.71■■■□□ 2.35
TSPAN4-203ENST00000397397 NUTM1Q86Y26 1132 aa29.71■■■□□ 2.35
TSPAN4-203ENST00000397397 MEIS3Q99687 375 aa29.71■■■□□ 2.35
TSPAN4-203ENST00000397397 CNBD1Q8NA66 436 aa29.71■■■□□ 2.35
TSPAN4-203ENST00000397397 SH3TC1Q8TE82 1336 aa29.7■■■□□ 2.35
TSPAN4-203ENST00000397397 ZBTB7BO15156 539 aaPredicted RBP29.7■■■□□ 2.34
TSPAN4-203ENST00000397397 NBPF7P0C2Y1 421 aaPredicted RBP29.7■■■□□ 2.34
TSPAN4-203ENST00000397397 POLD1P28340 1107 aa29.7■■■□□ 2.34
TSPAN4-203ENST00000397397 SYNE4Q8N205 404 aa29.7■■■□□ 2.34
TSPAN4-203ENST00000397397 GNAI3P08754 354 aa29.69■■■□□ 2.34
TSPAN4-203ENST00000397397 ERFEQ4G0M1 354 aa29.69■■■□□ 2.34
TSPAN4-203ENST00000397397 NRXN2Q9P2S2 1712 aa29.69■■■□□ 2.34
TSPAN4-203ENST00000397397 UTYO14607 1347 aa29.69■■■□□ 2.34
TSPAN4-203ENST00000397397 UBTFL1P0CB47 393 aaPredicted RBP29.68■■■□□ 2.34
TSPAN4-203ENST00000397397 CASP7P55210 303 aa29.68■■■□□ 2.34
TSPAN4-203ENST00000397397 PRR5LQ6MZQ0 368 aa29.68■■■□□ 2.34
TSPAN4-203ENST00000397397 NEFLP07196 543 aa29.67■■■□□ 2.34
TSPAN4-203ENST00000397397 CCDC24Q8N4L8 307 aa29.67■■■□□ 2.34
TSPAN4-203ENST00000397397 CHMP4BQ9H444 224 aaKnown RBP29.67■■■□□ 2.34
TSPAN4-203ENST00000397397 IRS4O14654 1257 aaPredicted RBP29.66■■■□□ 2.34
TSPAN4-203ENST00000397397 ST5P78524 1137 aa29.66■■■□□ 2.34
TSPAN4-203ENST00000397397 CDHR2Q9BYE9 1310 aa29.66■■■□□ 2.34
TSPAN4-203ENST00000397397 FHDC1Q9C0D6 1143 aaPredicted RBP29.66■■■□□ 2.34
TSPAN4-203ENST00000397397 ABCC12Q96J65 1359 aa29.64■■■□□ 2.34
TSPAN4-203ENST00000397397 EXOC6Q8TAG9 804 aa29.64■■■□□ 2.34
TSPAN4-203ENST00000397397 DDX60Q8IY21 1712 aaKnown RBP29.63■■■□□ 2.33
TSPAN4-203ENST00000397397 HCLS1P14317 486 aaPredicted RBP29.63■■■□□ 2.33
TSPAN4-203ENST00000397397 SUCLG2Q96I99 432 aa29.63■■■□□ 2.33
TSPAN4-203ENST00000397397 HDAC5Q9UQL6 1122 aa29.63■■■□□ 2.33
TSPAN4-203ENST00000397397 SLC10A5Q5PT55 438 aa29.62■■■□□ 2.33
TSPAN4-203ENST00000397397 LAMB2P55268 1798 aa29.62■■■□□ 2.33
TSPAN4-203ENST00000397397 GNAI2P04899 355 aa29.62■■■□□ 2.33
TSPAN4-203ENST00000397397 HSP90B1P14625 803 aaKnown RBP29.62■■■□□ 2.33
TSPAN4-203ENST00000397397 SYT17Q9BSW7 474 aa29.62■■■□□ 2.33
TSPAN4-203ENST00000397397 ZBTB40Q9NUA8 1239 aa29.62■■■□□ 2.33
TSPAN4-203ENST00000397397 LRRFIP2Q9Y608 721 aaKnown RBP29.61■■■□□ 2.33
TSPAN4-203ENST00000397397 PDE8AO60658 829 aa29.6■■■□□ 2.33
TSPAN4-203ENST00000397397 C1orf115Q9H7X2 142 aa29.6■■■□□ 2.33
TSPAN4-203ENST00000397397 PLA2G12BQ9BX93 195 aa29.59■■■□□ 2.33
TSPAN4-203ENST00000397397 MYH3P11055 1940 aa29.58■■■□□ 2.33
TSPAN4-203ENST00000397397 KAZALD1Q96I82 304 aa29.58■■■□□ 2.33
TSPAN4-203ENST00000397397 RIC1Q4ADV7 1423 aa29.57■■■□□ 2.32
TSPAN4-203ENST00000397397 TNRC6CQ9HCJ0 1690 aaKnown RBP29.57■■■□□ 2.32
TSPAN4-203ENST00000397397 EPHA10Q5JZY3 1008 aa29.57■■■□□ 2.32
TSPAN4-203ENST00000397397 NLRP3Q96P20 1036 aa29.57■■■□□ 2.32
TSPAN4-203ENST00000397397 BICC1Q9H694 974 aaKnown RBP29.57■■■□□ 2.32
TSPAN4-203ENST00000397397 ANKRD31Q8N7Z5 1873 aa29.57■■■□□ 2.32
TSPAN4-203ENST00000397397 FOXO4P98177 505 aa29.56■■■□□ 2.32
TSPAN4-203ENST00000397397 KLHL34Q8N239 644 aa29.56■■■□□ 2.32
TSPAN4-203ENST00000397397 BRIP1Q9BX63 1249 aa29.56■■■□□ 2.32
TSPAN4-203ENST00000397397 C10orf71Q711Q0 1435 aa29.55■■■□□ 2.32
TSPAN4-203ENST00000397397 CTSWP56202 376 aa29.54■■■□□ 2.32
TSPAN4-203ENST00000397397 C3orf67Q6ZVT6 689 aa29.54■■■□□ 2.32
TSPAN4-203ENST00000397397 AAMPQ13685 434 aa29.54■■■□□ 2.32
TSPAN4-203ENST00000397397 ANKRD44Q8N8A2 993 aa29.54■■■□□ 2.32
TSPAN4-203ENST00000397397 PDE6BP35913 854 aa29.53■■■□□ 2.32
TSPAN4-203ENST00000397397 LMBR1LQ6UX01 489 aa29.53■■■□□ 2.32
TSPAN4-203ENST00000397397 TTLL11Q8NHH1 800 aa29.52■■■□□ 2.32
TSPAN4-203ENST00000397397 CCDC85AQ96PX6 553 aaPredicted RBP29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms