RNA–Protein interactions for RNA: ENST00000397337.6

NEB-202, Transcript of nebulin, humanhuman

TSL 5

Gene NEB, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-202ENST00000397337 TAF1P21675 1872 aa6.79□□□□□ -1.32
NEB-202ENST00000397337 NBR1Q14596 966 aa6.78□□□□□ -1.32
NEB-202ENST00000397337 INTS3Q68E01 1043 aaKnown RBP6.78□□□□□ -1.32
NEB-202ENST00000397337 KRT27Q7Z3Y8 459 aa6.78□□□□□ -1.32
NEB-202ENST00000397337 ILDR1Q86SU0 546 aaPredicted RBP6.78□□□□□ -1.32
NEB-202ENST00000397337 FAM89AQ96GI7 184 aa6.78□□□□□ -1.32
NEB-202ENST00000397337 PDZRN3Q9UPQ7 1066 aa6.78□□□□□ -1.32
NEB-202ENST00000397337 SBF2Q86WG5 1849 aa6.78□□□□□ -1.32
NEB-202ENST00000397337 ATRNO75882 1429 aa6.78□□□□□ -1.32
NEB-202ENST00000397337 KSR2Q6VAB6 950 aa6.78□□□□□ -1.32
NEB-202ENST00000397337 FBXO22Q8NEZ5 403 aa6.78□□□□□ -1.32
NEB-202ENST00000397337 KAZALD1Q96I82 304 aa6.78□□□□□ -1.32
NEB-202ENST00000397337 SRCIN1Q9C0H9 1055 aa6.78□□□□□ -1.32
NEB-202ENST00000397337 PDGFDQ9GZP0 370 aaPredicted RBP6.78□□□□□ -1.32
NEB-202ENST00000397337 IL1RAPL2Q9NP60 686 aa6.78□□□□□ -1.32
NEB-202ENST00000397337 C9orf78Q9NZ63 289 aaPredicted RBP6.78□□□□□ -1.32
NEB-202ENST00000397337 PTPRCP08575 1304 aa6.77□□□□□ -1.32
NEB-202ENST00000397337 AFDNP55196 1824 aaKnown RBP6.77□□□□□ -1.33
NEB-202ENST00000397337 CD44P16070 742 aaKnown RBP6.77□□□□□ -1.33
NEB-202ENST00000397337 PDE4AP27815 886 aa6.77□□□□□ -1.33
NEB-202ENST00000397337 BRPF1P55201 1214 aaPredicted RBP6.77□□□□□ -1.33
NEB-202ENST00000397337 ANKRD45Q5TZF3 282 aa6.77□□□□□ -1.33
NEB-202ENST00000397337 CEP85Q6P2H3 762 aa6.77□□□□□ -1.33
NEB-202ENST00000397337 INTS5Q6P9B9 1019 aaKnown RBP6.77□□□□□ -1.33
NEB-202ENST00000397337 NUTM1Q86Y26 1132 aa6.77□□□□□ -1.33
NEB-202ENST00000397337 FBXO41Q8TF61 875 aa6.77□□□□□ -1.33
NEB-202ENST00000397337 SUCLG2Q96I99 432 aa6.77□□□□□ -1.33
NEB-202ENST00000397337 CHMP3Q9Y3E7 222 aa6.77□□□□□ -1.33
NEB-202ENST00000397337 DEFB132Q7Z7B7 95 aa6.77□□□□□ -1.33
NEB-202ENST00000397337 KCNV2Q8TDN2 545 aa6.77□□□□□ -1.33
NEB-202ENST00000397337 ARHGAP45Q92619 1136 aa6.77□□□□□ -1.33
NEB-202ENST00000397337 HYPKQ9NX55 129 aa6.77□□□□□ -1.33
NEB-202ENST00000397337 CCNL1Q9UK58 526 aaPredicted RBP6.77□□□□□ -1.33
NEB-202ENST00000397337 WWC3Q9ULE0 1092 aa6.77□□□□□ -1.33
NEB-202ENST00000397337 ATP10DQ9P241 1426 aa6.76□□□□□ -1.33
NEB-202ENST00000397337 THSD7AQ9UPZ6 1657 aa6.76□□□□□ -1.33
NEB-202ENST00000397337 A0A087WZG4 1122 aa6.76□□□□□ -1.33
NEB-202ENST00000397337 NEURL1BA8MQ27 555 aa6.76□□□□□ -1.33
NEB-202ENST00000397337 GNPATO15228 680 aa6.76□□□□□ -1.33
NEB-202ENST00000397337 UBTFL1P0CB47 393 aaPredicted RBP6.76□□□□□ -1.33
NEB-202ENST00000397337 RXRBP28702 533 aa6.76□□□□□ -1.33
NEB-202ENST00000397337 PPP1R42Q7Z4L9 355 aa6.76□□□□□ -1.33
NEB-202ENST00000397337 ZNF594Q96JF6 807 aaPredicted RBP6.76□□□□□ -1.33
NEB-202ENST00000397337 BICC1Q9H694 974 aaKnown RBP6.76□□□□□ -1.33
NEB-202ENST00000397337 ARFGEF2Q9Y6D5 1785 aa6.76□□□□□ -1.33
NEB-202ENST00000397337 TJP1Q07157 1748 aa6.76□□□□□ -1.33
NEB-202ENST00000397337 PAPPAQ13219 1627 aa6.76□□□□□ -1.33
NEB-202ENST00000397337 SRGAP3O43295 1099 aa6.76□□□□□ -1.33
NEB-202ENST00000397337 DZIP3Q86Y13 1208 aaKnown RBP6.76□□□□□ -1.33
NEB-202ENST00000397337 CDCA7Q9BWT1 371 aaPredicted RBP6.76□□□□□ -1.33
NEB-202ENST00000397337 BABAM1Q9NWV8 329 aa6.76□□□□□ -1.33
NEB-202ENST00000397337 NDUFB9Q9Y6M9 179 aa6.76□□□□□ -1.33
NEB-202ENST00000397337 SOS1Q07889 1333 aaPredicted RBP6.75□□□□□ -1.33
NEB-202ENST00000397337 NUP98P52948 1817 aa6.75□□□□□ -1.33
NEB-202ENST00000397337 SNAP23O00161 211 aa6.75□□□□□ -1.33
NEB-202ENST00000397337 STARD3NLO95772 234 aa6.75□□□□□ -1.33
NEB-202ENST00000397337 HCLS1P14317 486 aaPredicted RBP6.75□□□□□ -1.33
NEB-202ENST00000397337 RBM6P78332 1123 aaKnown RBP6.75□□□□□ -1.33
NEB-202ENST00000397337 NPM2Q86SE8 214 aaKnown RBP6.75□□□□□ -1.33
NEB-202ENST00000397337 MS4A4AQ96JQ5 239 aa6.75□□□□□ -1.33
NEB-202ENST00000397337 UBN2Q6ZU65 1347 aa6.75□□□□□ -1.33
NEB-202ENST00000397337 WTIPA6NIX2 430 aaPredicted RBP6.75□□□□□ -1.33
NEB-202ENST00000397337 ONECUT3O60422 494 aaPredicted RBP6.75□□□□□ -1.33
NEB-202ENST00000397337 MAP4K4O95819 1239 aaPredicted RBP6.75□□□□□ -1.33
NEB-202ENST00000397337 APBA3O96018 575 aa6.75□□□□□ -1.33
NEB-202ENST00000397337 HOXB7P09629 217 aa6.75□□□□□ -1.33
NEB-202ENST00000397337 CCT4P50991 539 aaKnown RBP6.75□□□□□ -1.33
NEB-202ENST00000397337 EN1Q05925 392 aaPredicted RBP6.75□□□□□ -1.33
NEB-202ENST00000397337 GCKRQ14397 625 aa6.75□□□□□ -1.33
NEB-202ENST00000397337 FAM196AQ6ZSG2 479 aa6.75□□□□□ -1.33
NEB-202ENST00000397337 CENPFP49454 3210 aa6.75□□□□□ -1.33
NEB-202ENST00000397337 LAMB4A4D0S4 1761 aa6.74□□□□□ -1.33
NEB-202ENST00000397337 GRM8O00222 908 aa6.74□□□□□ -1.33
NEB-202ENST00000397337 SEC24BO95487 1268 aa6.74□□□□□ -1.33
NEB-202ENST00000397337 GNAI2P04899 355 aa6.74□□□□□ -1.33
NEB-202ENST00000397337 MSL1Q68DK7 614 aa6.74□□□□□ -1.33
NEB-202ENST00000397337 CENPQQ7L2Z9 268 aaPredicted RBP6.74□□□□□ -1.33
NEB-202ENST00000397337 METTL22Q9BUU2 404 aaPredicted RBP6.74□□□□□ -1.33
NEB-202ENST00000397337 CCDC87Q9NVE4 849 aa6.74□□□□□ -1.33
NEB-202ENST00000397337 SURF6O75683 361 aaKnown RBP6.74□□□□□ -1.33
NEB-202ENST00000397337 USPL1Q5W0Q7 1092 aa6.74□□□□□ -1.33
NEB-202ENST00000397337 C3orf67Q6ZVT6 689 aa6.74□□□□□ -1.33
NEB-202ENST00000397337 PLBD2Q8NHP8 589 aa6.74□□□□□ -1.33
NEB-202ENST00000397337 RWDD1Q9H446 243 aaPredicted RBP6.74□□□□□ -1.33
NEB-202ENST00000397337 DDX58O95786 925 aaKnown RBP6.73□□□□□ -1.33
NEB-202ENST00000397337 NEXNQ0ZGT2 675 aa6.73□□□□□ -1.33
NEB-202ENST00000397337 ERICH6BQ5W0A0 696 aa6.73□□□□□ -1.33
NEB-202ENST00000397337 ZNF772Q68DY9 489 aaPredicted RBP6.73□□□□□ -1.33
NEB-202ENST00000397337 LMBR1LQ6UX01 489 aa6.73□□□□□ -1.33
NEB-202ENST00000397337 LINS1Q8NG48 757 aa6.73□□□□□ -1.33
NEB-202ENST00000397337 MS4A3Q96HJ5 214 aa6.73□□□□□ -1.33
NEB-202ENST00000397337 COL4A1P02462 1669 aa6.73□□□□□ -1.33
NEB-202ENST00000397337 CHGBP05060 677 aa6.72□□□□□ -1.33
NEB-202ENST00000397337 EIF5P55010 431 aaKnown RBP6.72□□□□□ -1.33
NEB-202ENST00000397337 EZH2Q15910 746 aaKnown RBP6.72□□□□□ -1.33
NEB-202ENST00000397337 ZNF827Q17R98 1081 aa6.72□□□□□ -1.33
NEB-202ENST00000397337 ANKRD44Q8N8A2 993 aa6.72□□□□□ -1.33
NEB-202ENST00000397337 PUS3Q9BZE2 481 aaKnown RBP6.72□□□□□ -1.33
NEB-202ENST00000397337 NIP7Q9Y221 180 aaKnown RBP eCLIP6.72□□□□□ -1.33
NEB-202ENST00000397337 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms