RNA–Protein interactions for RNA: ENST00000397113.6

FGFR1-209, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FGFR1, Length 3,680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-209ENST00000397113 LETM1O95202 739 aaPredicted RBP12.15□□□□□ -0.47
FGFR1-209ENST00000397113 ZNF165P49910 485 aa12.15□□□□□ -0.47
FGFR1-209ENST00000397113 TYRO3Q06418 890 aa12.15□□□□□ -0.47
FGFR1-209ENST00000397113 UVSSAQ2YD98 709 aa12.15□□□□□ -0.47
FGFR1-209ENST00000397113 CCAR2Q8N163 923 aaKnown RBP12.15□□□□□ -0.47
FGFR1-209ENST00000397113 GTPBP4Q9BZE4 634 aaKnown RBP12.15□□□□□ -0.47
FGFR1-209ENST00000397113 ZKSCAN1P17029 563 aaPredicted RBP12.14□□□□□ -0.47
FGFR1-209ENST00000397113 FLIIQ13045 1269 aa12.14□□□□□ -0.47
FGFR1-209ENST00000397113 RREB1Q92766 1687 aa12.14□□□□□ -0.47
FGFR1-209ENST00000397113 POLR3GO15318 223 aaPredicted RBP12.14□□□□□ -0.47
FGFR1-209ENST00000397113 PPP1R42Q7Z4L9 355 aa12.14□□□□□ -0.47
FGFR1-209ENST00000397113 HOMER1Q86YM7 354 aa12.14□□□□□ -0.47
FGFR1-209ENST00000397113 GNAI3P08754 354 aa12.14□□□□□ -0.47
FGFR1-209ENST00000397113 CCT4P50991 539 aaKnown RBP12.14□□□□□ -0.47
FGFR1-209ENST00000397113 GUCY1B3Q02153 619 aa12.14□□□□□ -0.47
FGFR1-209ENST00000397113 RUFY3Q7L099 469 aa12.14□□□□□ -0.47
FGFR1-209ENST00000397113 CNTROBQ8N137 903 aa12.14□□□□□ -0.47
FGFR1-209ENST00000397113 LRRC2Q9BYS8 371 aa12.14□□□□□ -0.47
FGFR1-209ENST00000397113 ST7Q9NRC1 585 aa12.14□□□□□ -0.47
FGFR1-209ENST00000397113 SNX14Q9Y5W7 946 aa12.14□□□□□ -0.47
FGFR1-209ENST00000397113 CYP46A1Q9Y6A2 500 aa12.14□□□□□ -0.47
FGFR1-209ENST00000397113 LTBP4Q8N2S1 1624 aa12.13□□□□□ -0.47
FGFR1-209ENST00000397113 RAB11FIP3O75154 756 aa12.13□□□□□ -0.47
FGFR1-209ENST00000397113 ADCK5Q3MIX3 580 aa12.13□□□□□ -0.47
FGFR1-209ENST00000397113 GTF3C6Q969F1 213 aa12.13□□□□□ -0.47
FGFR1-209ENST00000397113 TBX22Q9Y458 520 aa12.13□□□□□ -0.47
FGFR1-209ENST00000397113 INTS4Q96HW7 963 aaKnown RBP12.13□□□□□ -0.47
FGFR1-209ENST00000397113 USP16Q9Y5T5 823 aa12.13□□□□□ -0.47
FGFR1-209ENST00000397113 ISM2Q6H9L7 571 aa12.13□□□□□ -0.47
FGFR1-209ENST00000397113 IFIT2P09913 472 aaKnown RBP12.12□□□□□ -0.47
FGFR1-209ENST00000397113 CUL4AQ13619 759 aa12.12□□□□□ -0.47
FGFR1-209ENST00000397113 GNL2Q13823 731 aaKnown RBP12.12□□□□□ -0.47
FGFR1-209ENST00000397113 CDC37L1Q7L3B6 337 aa12.12□□□□□ -0.47
FGFR1-209ENST00000397113 LAMB4A4D0S4 1761 aa12.12□□□□□ -0.47
FGFR1-209ENST00000397113 EIF4A2Q14240 407 aaKnown RBP12.12□□□□□ -0.47
FGFR1-209ENST00000397113 SKIDA1Q1XH10 827 aa12.12□□□□□ -0.47
FGFR1-209ENST00000397113 CEP135Q66GS9 1140 aa12.12□□□□□ -0.47
FGFR1-209ENST00000397113 FAM200AQ8TCP9 573 aa12.12□□□□□ -0.47
FGFR1-209ENST00000397113 NCBP1Q09161 790 aaKnown RBP12.12□□□□□ -0.47
FGFR1-209ENST00000397113 CBX8Q9HC52 389 aa12.12□□□□□ -0.47
FGFR1-209ENST00000397113 SCN11AQ9UI33 1791 aa12.11□□□□□ -0.47
FGFR1-209ENST00000397113 TNNT3P45378 269 aaPredicted RBP12.11□□□□□ -0.47
FGFR1-209ENST00000397113 AIMP1Q12904 312 aaKnown RBP12.11□□□□□ -0.47
FGFR1-209ENST00000397113 PTPN14Q15678 1187 aa12.11□□□□□ -0.47
FGFR1-209ENST00000397113 ELF2Q15723 593 aa12.11□□□□□ -0.47
FGFR1-209ENST00000397113 HDGFL1Q5TGJ6 251 aa12.11□□□□□ -0.47
FGFR1-209ENST00000397113 TTC6Q86TZ1 520 aa12.11□□□□□ -0.47
FGFR1-209ENST00000397113 PHAXQ9H814 394 aaKnown RBP12.11□□□□□ -0.47
FGFR1-209ENST00000397113 KIF20AO95235 890 aa12.11□□□□□ -0.47
FGFR1-209ENST00000397113 STK11IPQ8N1F8 1099 aa12.11□□□□□ -0.47
FGFR1-209ENST00000397113 USHBP1Q8N6Y0 703 aa12.11□□□□□ -0.47
FGFR1-209ENST00000397113 CCDC8Q9H0W5 538 aaPredicted RBP12.11□□□□□ -0.47
FGFR1-209ENST00000397113 PA2G4Q9UQ80 394 aaKnown RBP12.11□□□□□ -0.47
FGFR1-209ENST00000397113 GTF2F1P35269 517 aaKnown RBP eCLIP12.1□□□□□ -0.471e-5■□□□□ 9
FGFR1-209ENST00000397113 NUDT16Q96DE0 195 aaKnown RBP12.1□□□□□ -0.47
FGFR1-209ENST00000397113 C9orf78Q9NZ63 289 aaPredicted RBP12.1□□□□□ -0.47
FGFR1-209ENST00000397113 ZNF215Q9UL58 517 aaPredicted RBP12.1□□□□□ -0.47
FGFR1-209ENST00000397113 ROBO2Q9HCK4 1378 aa12.1□□□□□ -0.47
FGFR1-209ENST00000397113 SMC2O95347 1197 aa12.1□□□□□ -0.47
FGFR1-209ENST00000397113 ZNF853P0CG23 659 aa12.1□□□□□ -0.47
FGFR1-209ENST00000397113 PTH1RQ03431 593 aa12.1□□□□□ -0.47
FGFR1-209ENST00000397113 BIN1O00499 593 aa12.09□□□□□ -0.47
FGFR1-209ENST00000397113 SKILP12757 684 aa12.09□□□□□ -0.47
FGFR1-209ENST00000397113 UTP14CQ5TAP6 766 aaKnown RBP12.09□□□□□ -0.47
FGFR1-209ENST00000397113 RHPN1Q8TCX5 695 aa12.09□□□□□ -0.47
FGFR1-209ENST00000397113 BOLA2Q9H3K6 86 aa12.09□□□□□ -0.47
FGFR1-209ENST00000397113 TAF7Q15545 349 aaPredicted RBP12.09□□□□□ -0.47
FGFR1-209ENST00000397113 CACTINQ8WUQ7 758 aaKnown RBP12.09□□□□□ -0.47
FGFR1-209ENST00000397113 NWD2Q9ULI1 1742 aa12.09□□□□□ -0.47
FGFR1-209ENST00000397113 NDUFB9Q9Y6M9 179 aa12.09□□□□□ -0.47
FGFR1-209ENST00000397113 LRP6O75581 1613 aa12.09□□□□□ -0.47
FGFR1-209ENST00000397113 PTPN21Q16825 1174 aa12.09□□□□□ -0.47
FGFR1-209ENST00000397113 CLASRPQ8N2M8 674 aaKnown RBP12.09□□□□□ -0.47
FGFR1-209ENST00000397113 SDF4Q9BRK5 362 aa12.09□□□□□ -0.47
FGFR1-209ENST00000397113 FSD1Q9BTV5 496 aa12.09□□□□□ -0.47
FGFR1-209ENST00000397113 USP27XA6NNY8 438 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 NR1I2O75469 434 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 HSPA4P34932 840 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 ANAPC15P60006 121 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 ME3Q16798 604 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 MTHFSDQ2M296 383 aaKnown RBP12.08□□□□□ -0.48
FGFR1-209ENST00000397113 HSP90AA4PQ58FG1 418 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 CCDC30Q5VVM6 783 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 OGFRQ9NZT2 677 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 MTMR6Q9Y217 621 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 PHLPP1O60346 1717 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 PTPRCP08575 1304 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 NPHP4O75161 1426 aaPredicted RBP12.08□□□□□ -0.48
FGFR1-209ENST00000397113 ZSCAN25Q6NSZ9 544 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 LMOD2Q6P5Q4 547 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 AACSQ86V21 672 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 ESF1Q9H501 851 aaKnown RBP12.08□□□□□ -0.48
FGFR1-209ENST00000397113 PXDNQ92626 1479 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 RGPD2P0DJD1 1756 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 OVOS2A0A0G2JMS6 1433 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 TPM3P06753 285 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 LARP1Q6PKG0 1096 aaKnown RBP12.08□□□□□ -0.48
FGFR1-209ENST00000397113 USP6P35125 1406 aa12.08□□□□□ -0.48
FGFR1-209ENST00000397113 CHL1O00533 1208 aa12.07□□□□□ -0.48
FGFR1-209ENST00000397113 ATP8B2P98198 1209 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms