RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 ATP5J2-PTCD1G3V325 749 aa18.58■□□□□ 0.57
TM9SF1-202ENST00000396854 DEKP35659 375 aaKnown RBP18.58■□□□□ 0.57
TM9SF1-202ENST00000396854 GCKRQ14397 625 aa18.58■□□□□ 0.57
TM9SF1-202ENST00000396854 CCDC191Q8NCU4 936 aa18.58■□□□□ 0.57
TM9SF1-202ENST00000396854 FLAD1Q8NFF5 587 aa18.58■□□□□ 0.57
TM9SF1-202ENST00000396854 UTYO14607 1347 aa18.58■□□□□ 0.56
TM9SF1-202ENST00000396854 ZPR1O75312 459 aa18.58■□□□□ 0.56
TM9SF1-202ENST00000396854 SLC15A2Q16348 729 aa18.58■□□□□ 0.56
TM9SF1-202ENST00000396854 ZNF34Q8IZ26 560 aa18.58■□□□□ 0.56
TM9SF1-202ENST00000396854 BCL2L12Q9HB09 334 aa18.58■□□□□ 0.56
TM9SF1-202ENST00000396854 GNAI3P08754 354 aa18.57■□□□□ 0.56
TM9SF1-202ENST00000396854 USPL1Q5W0Q7 1092 aa18.57■□□□□ 0.56
TM9SF1-202ENST00000396854 STK32BQ9NY57 414 aa18.57■□□□□ 0.56
TM9SF1-202ENST00000396854 SRP68Q9UHB9 627 aaKnown RBP18.57■□□□□ 0.56
TM9SF1-202ENST00000396854 GRM8O00222 908 aa18.56■□□□□ 0.56
TM9SF1-202ENST00000396854 ILDR2Q71H61 639 aa18.56■□□□□ 0.56
TM9SF1-202ENST00000396854 SKAP1Q86WV1 359 aa18.56■□□□□ 0.56
TM9SF1-202ENST00000396854 CWC25Q9NXE8 425 aaPredicted RBP18.56■□□□□ 0.56
TM9SF1-202ENST00000396854 UBN2Q6ZU65 1347 aa18.55■□□□□ 0.56
TM9SF1-202ENST00000396854 PNPLA7Q6ZV29 1317 aa18.55■□□□□ 0.56
TM9SF1-202ENST00000396854 NLRP10Q86W26 655 aa18.55■□□□□ 0.56
TM9SF1-202ENST00000396854 C9orf78Q9NZ63 289 aaPredicted RBP18.55■□□□□ 0.56
TM9SF1-202ENST00000396854 LAMB2P55268 1798 aa18.55■□□□□ 0.56
TM9SF1-202ENST00000396854 NBPF7P0C2Y1 421 aaPredicted RBP18.54■□□□□ 0.56
TM9SF1-202ENST00000396854 GPTP24298 496 aa18.54■□□□□ 0.56
TM9SF1-202ENST00000396854 PARP10Q53GL7 1025 aa18.54■□□□□ 0.56
TM9SF1-202ENST00000396854 COL23A1Q86Y22 540 aaPredicted RBP18.54■□□□□ 0.56
TM9SF1-202ENST00000396854 DDRGK1Q96HY6 314 aa18.54■□□□□ 0.56
TM9SF1-202ENST00000396854 UBTFL1P0CB47 393 aaPredicted RBP18.53■□□□□ 0.56
TM9SF1-202ENST00000396854 MYH3P11055 1940 aa18.53■□□□□ 0.56
TM9SF1-202ENST00000396854 GYS1P13807 737 aa18.53■□□□□ 0.56
TM9SF1-202ENST00000396854 NIP7Q9Y221 180 aaKnown RBP eCLIP18.53■□□□□ 0.56
TM9SF1-202ENST00000396854 H7C1W4 665 aa18.52■□□□□ 0.56
TM9SF1-202ENST00000396854 GNAI2P04899 355 aa18.52■□□□□ 0.56
TM9SF1-202ENST00000396854 CASP7P55210 303 aa18.52■□□□□ 0.56
TM9SF1-202ENST00000396854 RTL5Q5HYW3 569 aaPredicted RBP18.52■□□□□ 0.56
TM9SF1-202ENST00000396854 DDX60Q8IY21 1712 aaKnown RBP18.52■□□□□ 0.55
TM9SF1-202ENST00000396854 TBC1D9BQ66K14 1250 aa18.51■□□□□ 0.55
TM9SF1-202ENST00000396854 HDAC5Q9UQL6 1122 aa18.51■□□□□ 0.55
TM9SF1-202ENST00000396854 PCDHB15Q9Y5E8 787 aa18.51■□□□□ 0.55
TM9SF1-202ENST00000396854 CASZ1Q86V15 1759 aa18.51■□□□□ 0.55
TM9SF1-202ENST00000396854 PCCAP05165 728 aaPredicted RBP18.51■□□□□ 0.55
TM9SF1-202ENST00000396854 C1orf115Q9H7X2 142 aa18.51■□□□□ 0.55
TM9SF1-202ENST00000396854 FAM161AQ3B820 660 aa18.5■□□□□ 0.55
TM9SF1-202ENST00000396854 UBE3BQ7Z3V4 1068 aa18.5■□□□□ 0.55
TM9SF1-202ENST00000396854 ZBTB38Q8NAP3 1195 aaPredicted RBP18.5■□□□□ 0.55
TM9SF1-202ENST00000396854 LRRFIP2Q9Y608 721 aaKnown RBP18.5■□□□□ 0.55
TM9SF1-202ENST00000396854 SUSD4Q5VX71 490 aa18.5■□□□□ 0.55
TM9SF1-202ENST00000396854 PPP1R42Q7Z4L9 355 aa18.49■□□□□ 0.55
TM9SF1-202ENST00000396854 CDHR2Q9BYE9 1310 aa18.49■□□□□ 0.55
TM9SF1-202ENST00000396854 NRXN2Q9P2S2 1712 aa18.48■□□□□ 0.55
TM9SF1-202ENST00000396854 NTSR2O95665 410 aa18.48■□□□□ 0.55
TM9SF1-202ENST00000396854 SETDB2Q96T68 719 aa18.48■□□□□ 0.55
TM9SF1-202ENST00000396854 CARMIL3Q8ND23 1372 aa18.48■□□□□ 0.55
TM9SF1-202ENST00000396854 C8orf34Q49A92 452 aa18.48■□□□□ 0.55
TM9SF1-202ENST00000396854 KAZALD1Q96I82 304 aa18.48■□□□□ 0.55
TM9SF1-202ENST00000396854 SUCLG2Q96I99 432 aa18.48■□□□□ 0.55
TM9SF1-202ENST00000396854 UTP14AQ9BVJ6 771 aaKnown RBP18.48■□□□□ 0.55
TM9SF1-202ENST00000396854 NFIXQ14938 502 aa18.47■□□□□ 0.55
TM9SF1-202ENST00000396854 CEP85Q6P2H3 762 aa18.47■□□□□ 0.55
TM9SF1-202ENST00000396854 RPAP2Q8IXW5 612 aaPredicted RBP18.47■□□□□ 0.55
TM9SF1-202ENST00000396854 TRMT112Q9UI30 125 aaKnown RBP18.47■□□□□ 0.55
TM9SF1-202ENST00000396854 TM4SF1P30408 202 aa18.46■□□□□ 0.55
TM9SF1-202ENST00000396854 BICDL1Q6ZP65 573 aa18.46■□□□□ 0.55
TM9SF1-202ENST00000396854 NLGN1Q8N2Q7 840 aa18.46■□□□□ 0.55
TM9SF1-202ENST00000396854 ANKRD44Q8N8A2 993 aa18.46■□□□□ 0.55
TM9SF1-202ENST00000396854 FAM89AQ96GI7 184 aa18.46■□□□□ 0.55
TM9SF1-202ENST00000396854 SH3TC1Q8TE82 1336 aa18.46■□□□□ 0.55
TM9SF1-202ENST00000396854 JARID2Q92833 1246 aaPredicted RBP18.46■□□□□ 0.55
TM9SF1-202ENST00000396854 PLA2G12BQ9BX93 195 aa18.46■□□□□ 0.55
TM9SF1-202ENST00000396854 MTX1Q13505 466 aa18.45■□□□□ 0.54
TM9SF1-202ENST00000396854 NYXQ9GZU5 481 aa18.45■□□□□ 0.54
TM9SF1-202ENST00000396854 HDAC1Q13547 482 aaPredicted RBP18.45■□□□□ 0.54
TM9SF1-202ENST00000396854 SIRT2Q8IXJ6 389 aa18.45■□□□□ 0.54
TM9SF1-202ENST00000396854 BICC1Q9H694 974 aaKnown RBP18.45■□□□□ 0.54
TM9SF1-202ENST00000396854 RABL6Q3YEC7 729 aaPredicted RBP18.44■□□□□ 0.54
TM9SF1-202ENST00000396854 IGHDP01880 384 aa18.43■□□□□ 0.54
TM9SF1-202ENST00000396854 ATP8B2P98198 1209 aa18.43■□□□□ 0.54
TM9SF1-202ENST00000396854 EPHA10Q5JZY3 1008 aa18.43■□□□□ 0.54
TM9SF1-202ENST00000396854 IRS4O14654 1257 aaPredicted RBP18.43■□□□□ 0.54
TM9SF1-202ENST00000396854 FOXO4P98177 505 aa18.43■□□□□ 0.54
TM9SF1-202ENST00000396854 NBPF5PQ86XG9 351 aaPredicted RBP18.43■□□□□ 0.54
TM9SF1-202ENST00000396854 SYNE4Q8N205 404 aa18.43■□□□□ 0.54
TM9SF1-202ENST00000396854 SLC16A10Q8TF71 515 aa18.43■□□□□ 0.54
TM9SF1-202ENST00000396854 FAM177BA6PVY3 158 aa18.42■□□□□ 0.54
TM9SF1-202ENST00000396854 TPTE2Q6XPS3 522 aa18.42■□□□□ 0.54
TM9SF1-202ENST00000396854 RWDD1Q9H446 243 aaPredicted RBP18.42■□□□□ 0.54
TM9SF1-202ENST00000396854 RIC1Q4ADV7 1423 aa18.42■□□□□ 0.54
TM9SF1-202ENST00000396854 POLRMTO00411 1230 aaKnown RBP18.42■□□□□ 0.54
TM9SF1-202ENST00000396854 HSP90B1P14625 803 aaKnown RBP18.42■□□□□ 0.54
TM9SF1-202ENST00000396854 DDR1Q08345 913 aa18.42■□□□□ 0.54
TM9SF1-202ENST00000396854 NUTM1Q86Y26 1132 aa18.42■□□□□ 0.54
TM9SF1-202ENST00000396854 TNRC6CQ9HCJ0 1690 aaKnown RBP18.41■□□□□ 0.54
TM9SF1-202ENST00000396854 PNMA6EA0A0J9YXQ4 647 aa18.41■□□□□ 0.54
TM9SF1-202ENST00000396854 PDE8AO60658 829 aa18.41■□□□□ 0.54
TM9SF1-202ENST00000396854 HMMRO75330 724 aa18.41■□□□□ 0.54
TM9SF1-202ENST00000396854 SLC10A5Q5PT55 438 aa18.41■□□□□ 0.54
TM9SF1-202ENST00000396854 ABCC12Q96J65 1359 aa18.4■□□□□ 0.54
TM9SF1-202ENST00000396854 POLA2Q14181 598 aa18.4■□□□□ 0.54
TM9SF1-202ENST00000396854 ERFEQ4G0M1 354 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms