RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 NLRP10Q86W26 655 aa15.82■□□□□ 0.12
TRIM39-204ENST00000396548 CCNL1Q9UK58 526 aaPredicted RBP15.82■□□□□ 0.12
TRIM39-204ENST00000396548 ZNF330Q9Y3S2 320 aaPredicted RBP15.82■□□□□ 0.12
TRIM39-204ENST00000396548 MYH3P11055 1940 aa15.82■□□□□ 0.12
TRIM39-204ENST00000396548 RGL2O15211 777 aa15.82■□□□□ 0.12
TRIM39-204ENST00000396548 RFX5P48382 616 aaPredicted RBP15.82■□□□□ 0.12
TRIM39-204ENST00000396548 JARID2Q92833 1246 aaPredicted RBP15.82■□□□□ 0.12
TRIM39-204ENST00000396548 BACH2Q9BYV9 841 aa15.82■□□□□ 0.12
TRIM39-204ENST00000396548 EXOC6BQ9Y2D4 811 aa15.82■□□□□ 0.12
TRIM39-204ENST00000396548 UBN2Q6ZU65 1347 aa15.82■□□□□ 0.12
TRIM39-204ENST00000396548 HSP90AB3PQ58FF7 597 aa15.81■□□□□ 0.12
TRIM39-204ENST00000396548 CASZ1Q86V15 1759 aa15.81■□□□□ 0.12
TRIM39-204ENST00000396548 AMIGO3Q86WK7 504 aa15.81■□□□□ 0.12
TRIM39-204ENST00000396548 PCCAP05165 728 aaPredicted RBP15.81■□□□□ 0.12
TRIM39-204ENST00000396548 PLA2G12BQ9BX93 195 aa15.81■□□□□ 0.12
TRIM39-204ENST00000396548 RPS6KA4O75676 772 aa15.8■□□□□ 0.12
TRIM39-204ENST00000396548 TRIM37O94972 964 aa15.8■□□□□ 0.12
TRIM39-204ENST00000396548 C16orf71Q8IYS4 520 aaPredicted RBP15.8■□□□□ 0.12
TRIM39-204ENST00000396548 SMARCA5O60264 1052 aaPredicted RBP15.8■□□□□ 0.12
TRIM39-204ENST00000396548 PLEKHM2Q8IWE5 1019 aa15.8■□□□□ 0.12
TRIM39-204ENST00000396548 ZBTB38Q8NAP3 1195 aaPredicted RBP15.8■□□□□ 0.12
TRIM39-204ENST00000396548 CDHR2Q9BYE9 1310 aa15.8■□□□□ 0.12
TRIM39-204ENST00000396548 RAB11FIP3O75154 756 aa15.79■□□□□ 0.12
TRIM39-204ENST00000396548 PROM2Q8N271 834 aa15.79■□□□□ 0.12
TRIM39-204ENST00000396548 SLC27A3Q5K4L6 730 aa15.78■□□□□ 0.12
TRIM39-204ENST00000396548 LRRCC1Q9C099 1032 aa15.78■□□□□ 0.12
TRIM39-204ENST00000396548 OTUD7AQ8TE49 926 aaPredicted RBP15.78■□□□□ 0.12
TRIM39-204ENST00000396548 FAM161AQ3B820 660 aa15.77■□□□□ 0.12
TRIM39-204ENST00000396548 CLEC4GQ6UXB4 293 aa15.77■□□□□ 0.12
TRIM39-204ENST00000396548 BCL2L12Q9HB09 334 aa15.77■□□□□ 0.12
TRIM39-204ENST00000396548 OSBPL3Q9H4L5 887 aa15.77■□□□□ 0.12
TRIM39-204ENST00000396548 COPRSQ9NQ92 184 aa15.77■□□□□ 0.12
TRIM39-204ENST00000396548 SURF6O75683 361 aaKnown RBP15.77■□□□□ 0.11
TRIM39-204ENST00000396548 PA2G4Q9UQ80 394 aaKnown RBP15.77■□□□□ 0.11
TRIM39-204ENST00000396548 CSF1RP07333 972 aa15.76■□□□□ 0.11
TRIM39-204ENST00000396548 PTPN12Q05209 780 aaKnown RBP15.76■□□□□ 0.11
TRIM39-204ENST00000396548 SMIM5Q71RC9 77 aa15.76■□□□□ 0.11
TRIM39-204ENST00000396548 PLSCR1O15162 318 aa15.76■□□□□ 0.11
TRIM39-204ENST00000396548 GPTP24298 496 aa15.76■□□□□ 0.11
TRIM39-204ENST00000396548 SYNE4Q8N205 404 aa15.75■□□□□ 0.11
TRIM39-204ENST00000396548 RHPN1Q8TCX5 695 aa15.75■□□□□ 0.11
TRIM39-204ENST00000396548 FAM89AQ96GI7 184 aa15.75■□□□□ 0.11
TRIM39-204ENST00000396548 NARFQ9UHQ1 456 aa15.75■□□□□ 0.11
TRIM39-204ENST00000396548 SUSD4Q5VX71 490 aa15.75■□□□□ 0.11
TRIM39-204ENST00000396548 LMBR1LQ6UX01 489 aa15.75■□□□□ 0.11
TRIM39-204ENST00000396548 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.75■□□□□ 0.11
TRIM39-204ENST00000396548 SASH1O94885 1247 aa15.75■□□□□ 0.11
TRIM39-204ENST00000396548 HSP90AB4PQ58FF6 505 aa15.75■□□□□ 0.11
TRIM39-204ENST00000396548 BMP2KLQ5H9B9 411 aa15.75■□□□□ 0.11
TRIM39-204ENST00000396548 RBM19Q9Y4C8 960 aaKnown RBP15.75■□□□□ 0.11
TRIM39-204ENST00000396548 LRP5O75197 1615 aa15.74■□□□□ 0.11
TRIM39-204ENST00000396548 APBB1O00213 710 aa15.74■□□□□ 0.11
TRIM39-204ENST00000396548 GNPATO15228 680 aa15.74■□□□□ 0.11
TRIM39-204ENST00000396548 KIF1BPQ96EK5 621 aa15.74■□□□□ 0.11
TRIM39-204ENST00000396548 ARXQ96QS3 562 aa15.74■□□□□ 0.11
TRIM39-204ENST00000396548 STAP2Q9UGK3 403 aa15.74■□□□□ 0.11
TRIM39-204ENST00000396548 NTSR2O95665 410 aa15.74■□□□□ 0.11
TRIM39-204ENST00000396548 GSPT1P15170 499 aaKnown RBP15.74■□□□□ 0.11
TRIM39-204ENST00000396548 PARP10Q53GL7 1025 aa15.73■□□□□ 0.11
TRIM39-204ENST00000396548 RTL5Q5HYW3 569 aaPredicted RBP15.73■□□□□ 0.11
TRIM39-204ENST00000396548 KLHDC4Q8TBB5 520 aa15.73■□□□□ 0.11
TRIM39-204ENST00000396548 ARHGEF1Q92888 912 aaKnown RBP15.73■□□□□ 0.11
TRIM39-204ENST00000396548 USP42Q9H9J4 1324 aaKnown RBP15.73■□□□□ 0.11
TRIM39-204ENST00000396548 NPM2Q86SE8 214 aaKnown RBP15.73■□□□□ 0.11
TRIM39-204ENST00000396548 AK7Q96M32 723 aa15.73■□□□□ 0.11
TRIM39-204ENST00000396548 RTCBQ9Y3I0 505 aaKnown RBP15.73■□□□□ 0.11
TRIM39-204ENST00000396548 TXNRD1Q16881 649 aa15.72■□□□□ 0.11
TRIM39-204ENST00000396548 TTC22Q5TAA0 569 aa15.72■□□□□ 0.11
TRIM39-204ENST00000396548 PDE1AP54750 535 aa15.72■□□□□ 0.11
TRIM39-204ENST00000396548 ERC1Q8IUD2 1116 aa15.71■□□□□ 0.11
TRIM39-204ENST00000396548 ZNF652Q9Y2D9 606 aa15.71■□□□□ 0.11
TRIM39-204ENST00000396548 ADRA2BP18089 450 aa15.71■□□□□ 0.11
TRIM39-204ENST00000396548 USPL1Q5W0Q7 1092 aa15.71■□□□□ 0.11
TRIM39-204ENST00000396548 TTLL11Q8NHH1 800 aa15.71■□□□□ 0.11
TRIM39-204ENST00000396548 SRP68Q9UHB9 627 aaKnown RBP15.71■□□□□ 0.11
TRIM39-204ENST00000396548 TRMT112Q9UI30 125 aaKnown RBP15.71■□□□□ 0.11
TRIM39-204ENST00000396548 ATG9AQ7Z3C6 839 aa15.71■□□□□ 0.1
TRIM39-204ENST00000396548 IL1RAPL2Q9NP60 686 aa15.71■□□□□ 0.1
TRIM39-204ENST00000396548 AOX1Q06278 1338 aa15.7■□□□□ 0.1
TRIM39-204ENST00000396548 IRS4O14654 1257 aaPredicted RBP15.7■□□□□ 0.1
TRIM39-204ENST00000396548 TBC1D9BQ66K14 1250 aa15.7■□□□□ 0.1
TRIM39-204ENST00000396548 UTP14AQ9BVJ6 771 aaKnown RBP15.7■□□□□ 0.1
TRIM39-204ENST00000396548 NIP7Q9Y221 180 aaKnown RBP eCLIP15.7■□□□□ 0.1
TRIM39-204ENST00000396548 CTSWP56202 376 aa15.7■□□□□ 0.1
TRIM39-204ENST00000396548 PDE8AO60658 829 aa15.69■□□□□ 0.1
TRIM39-204ENST00000396548 COL4A1P02462 1669 aa15.69■□□□□ 0.1
TRIM39-204ENST00000396548 QSER1Q2KHR3 1735 aa15.69■□□□□ 0.1
TRIM39-204ENST00000396548 AKT1S1Q96B36 256 aa15.69■□□□□ 0.1
TRIM39-204ENST00000396548 SEC24BO95487 1268 aa15.69■□□□□ 0.1
TRIM39-204ENST00000396548 MX1P20591 662 aa15.69■□□□□ 0.1
TRIM39-204ENST00000396548 SH3TC1Q8TE82 1336 aa15.68■□□□□ 0.1
TRIM39-204ENST00000396548 CIAO1O76071 339 aa15.68■□□□□ 0.1
TRIM39-204ENST00000396548 APBA3O96018 575 aa15.68■□□□□ 0.1
TRIM39-204ENST00000396548 SSFA2P28290 1259 aa15.68■□□□□ 0.1
TRIM39-204ENST00000396548 G3BP1Q13283 466 aaKnown RBP eCLIP15.68■□□□□ 0.1
TRIM39-204ENST00000396548 TRAPPC3LQ5T215 181 aa15.68■□□□□ 0.1
TRIM39-204ENST00000396548 PI4K2BQ8TCG2 481 aa15.68■□□□□ 0.1
TRIM39-204ENST00000396548 SIL1Q9H173 461 aa15.68■□□□□ 0.1
TRIM39-204ENST00000396548 ZBTB47Q9UFB7 747 aaPredicted RBP15.68■□□□□ 0.1
TRIM39-204ENST00000396548 RTL9Q8NET4 1388 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms