RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 ROBO1Q9Y6N7 1651 aa13.59□□□□□ -0.23
RAE1-203ENST00000395841 PLBD2Q8NHP8 589 aa13.59□□□□□ -0.23
RAE1-203ENST00000395841 ZNF445P59923 1031 aa13.59□□□□□ -0.23
RAE1-203ENST00000395841 PTH1RQ03431 593 aa13.59□□□□□ -0.23
RAE1-203ENST00000395841 RABL6Q3YEC7 729 aaPredicted RBP13.59□□□□□ -0.23
RAE1-203ENST00000395841 KLHDC4Q8TBB5 520 aa13.59□□□□□ -0.23
RAE1-203ENST00000395841 ZCRB1Q8TBF4 217 aaKnown RBP13.59□□□□□ -0.23
RAE1-203ENST00000395841 TLR7Q9NYK1 1049 aaKnown RBP13.59□□□□□ -0.23
RAE1-203ENST00000395841 NCLP19338 710 aaKnown RBP13.58□□□□□ -0.24
RAE1-203ENST00000395841 RFX5P48382 616 aaPredicted RBP13.58□□□□□ -0.24
RAE1-203ENST00000395841 AK2P54819 239 aa13.58□□□□□ -0.24
RAE1-203ENST00000395841 CAVIN1Q6NZI2 390 aaKnown RBP13.58□□□□□ -0.24
RAE1-203ENST00000395841 SNRKQ9NRH2 765 aa13.58□□□□□ -0.24
RAE1-203ENST00000395841 LIMCH1Q9UPQ0 1083 aa13.58□□□□□ -0.24
RAE1-203ENST00000395841 ERVV-2B6SEH9 535 aa13.58□□□□□ -0.24
RAE1-203ENST00000395841 FOXD4L5Q5VV16 416 aaPredicted RBP13.58□□□□□ -0.24
RAE1-203ENST00000395841 FOXD4L4Q8WXT5 416 aaPredicted RBP13.58□□□□□ -0.24
RAE1-203ENST00000395841 TM6SF1Q9BZW5 370 aa13.58□□□□□ -0.24
RAE1-203ENST00000395841 LAMB4A4D0S4 1761 aa13.58□□□□□ -0.24
RAE1-203ENST00000395841 CCDC171Q6TFL3 1326 aa13.57□□□□□ -0.24
RAE1-203ENST00000395841 PTCD1O75127 700 aaKnown RBP13.57□□□□□ -0.24
RAE1-203ENST00000395841 RUFY3Q7L099 469 aa13.57□□□□□ -0.24
RAE1-203ENST00000395841 UBE3BQ7Z3V4 1068 aa13.57□□□□□ -0.24
RAE1-203ENST00000395841 GPT2Q8TD30 523 aa13.57□□□□□ -0.24
RAE1-203ENST00000395841 WDR33Q9C0J8 1336 aaKnown RBP13.57□□□□□ -0.24
RAE1-203ENST00000395841 A0A087WZG4 1122 aa13.57□□□□□ -0.24
RAE1-203ENST00000395841 CASTP20810 708 aaKnown RBP13.57□□□□□ -0.24
RAE1-203ENST00000395841 PTPN12Q05209 780 aaKnown RBP13.57□□□□□ -0.24
RAE1-203ENST00000395841 NMIQ13287 307 aaPredicted RBP13.57□□□□□ -0.24
RAE1-203ENST00000395841 NECTIN1Q15223 517 aa13.57□□□□□ -0.24
RAE1-203ENST00000395841 ZSCAN23Q3MJ62 389 aa13.57□□□□□ -0.24
RAE1-203ENST00000395841 PRPF40BQ6NWY9 871 aaKnown RBP13.57□□□□□ -0.24
RAE1-203ENST00000395841 KAT6BQ8WYB5 2073 aa13.56□□□□□ -0.24
RAE1-203ENST00000395841 IL2RBP14784 551 aa13.56□□□□□ -0.24
RAE1-203ENST00000395841 CASP7P55210 303 aa13.56□□□□□ -0.24
RAE1-203ENST00000395841 NKX1-1Q15270 411 aaPredicted RBP13.56□□□□□ -0.24
RAE1-203ENST00000395841 BOLA2Q9H3K6 86 aa13.56□□□□□ -0.24
RAE1-203ENST00000395841 ARFGEF2Q9Y6D5 1785 aa13.56□□□□□ -0.24
RAE1-203ENST00000395841 ATP5J2-PTCD1G3V325 749 aa13.56□□□□□ -0.24
RAE1-203ENST00000395841 VPS53Q5VIR6 699 aa13.56□□□□□ -0.24
RAE1-203ENST00000395841 JARID2Q92833 1246 aaPredicted RBP13.56□□□□□ -0.24
RAE1-203ENST00000395841 MAP4K1Q92918 833 aa13.56□□□□□ -0.24
RAE1-203ENST00000395841 FAM227BQ96M60 508 aa13.56□□□□□ -0.24
RAE1-203ENST00000395841 FSD1Q9BTV5 496 aa13.56□□□□□ -0.24
RAE1-203ENST00000395841 ZSWIM6Q9HCJ5 1215 aa13.56□□□□□ -0.24
RAE1-203ENST00000395841 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.56□□□□□ -0.24
RAE1-203ENST00000395841 LTBP4Q8N2S1 1624 aa13.56□□□□□ -0.24
RAE1-203ENST00000395841 ABCA3Q99758 1704 aa13.55□□□□□ -0.24
RAE1-203ENST00000395841 NHSL1Q5SYE7 1610 aa13.55□□□□□ -0.24
RAE1-203ENST00000395841 A0A0G2JS52 829 aa13.55□□□□□ -0.24
RAE1-203ENST00000395841 NBPF26B4DH59 902 aa13.55□□□□□ -0.24
RAE1-203ENST00000395841 MBD3O95983 291 aa13.55□□□□□ -0.24
RAE1-203ENST00000395841 ZKSCAN1P17029 563 aaPredicted RBP13.55□□□□□ -0.24
RAE1-203ENST00000395841 NBPF14Q5TI25 921 aa13.55□□□□□ -0.24
RAE1-203ENST00000395841 NBPF10Q6P3W6 841 aaKnown RBP13.55□□□□□ -0.24
RAE1-203ENST00000395841 NBPF15Q8N660 670 aa13.55□□□□□ -0.24
RAE1-203ENST00000395841 CHAMP1Q96JM3 812 aa13.55□□□□□ -0.24
RAE1-203ENST00000395841 JAKMIP1Q96N16 626 aaKnown RBP13.55□□□□□ -0.24
RAE1-203ENST00000395841 CARD10Q9BWT7 1032 aa13.55□□□□□ -0.24
RAE1-203ENST00000395841 ATP5JP18859 108 aa13.55□□□□□ -0.24
RAE1-203ENST00000395841 TNNI3KQ59H18 835 aa13.55□□□□□ -0.24
RAE1-203ENST00000395841 PDRG1Q9NUG6 133 aa13.55□□□□□ -0.24
RAE1-203ENST00000395841 RBM8AQ9Y5S9 174 aaKnown RBP13.55□□□□□ -0.24
RAE1-203ENST00000395841 CYP46A1Q9Y6A2 500 aa13.55□□□□□ -0.24
RAE1-203ENST00000395841 FPGT-TNNI3KV9GXZ4 949 aa13.55□□□□□ -0.24
RAE1-203ENST00000395841 TFCP2Q12800 502 aa13.54□□□□□ -0.24
RAE1-203ENST00000395841 ADCK5Q3MIX3 580 aa13.54□□□□□ -0.24
RAE1-203ENST00000395841 RPAP1Q9BWH6 1393 aaPredicted RBP13.54□□□□□ -0.24
RAE1-203ENST00000395841 CPA1P15085 419 aa13.54□□□□□ -0.24
RAE1-203ENST00000395841 CREB3L3Q68CJ9 461 aa13.54□□□□□ -0.24
RAE1-203ENST00000395841 ZSCAN31Q96LW9 406 aaPredicted RBP13.54□□□□□ -0.24
RAE1-203ENST00000395841 DBNLQ9UJU6 430 aaKnown RBP13.54□□□□□ -0.24
RAE1-203ENST00000395841 MED23Q9ULK4 1368 aa13.53□□□□□ -0.24
RAE1-203ENST00000395841 A0A0D9SFI3 127 aa13.53□□□□□ -0.24
RAE1-203ENST00000395841 H7C1W4 665 aa13.53□□□□□ -0.24
RAE1-203ENST00000395841 KCNJ4P48050 445 aa13.53□□□□□ -0.24
RAE1-203ENST00000395841 NASPP49321 788 aaPredicted RBP13.53□□□□□ -0.24
RAE1-203ENST00000395841 SH2B1Q9NRF2 756 aaPredicted RBP13.53□□□□□ -0.24
RAE1-203ENST00000395841 KCPQ6ZWJ8 1503 aa13.53□□□□□ -0.24
RAE1-203ENST00000395841 AFDNP55196 1824 aaKnown RBP13.53□□□□□ -0.24
RAE1-203ENST00000395841 UBAP1LF5GYI3 381 aa13.53□□□□□ -0.24
RAE1-203ENST00000395841 RRAGDQ9NQL2 400 aaPredicted RBP13.53□□□□□ -0.24
RAE1-203ENST00000395841 UBR2Q8IWV8 1755 aa13.52□□□□□ -0.24
RAE1-203ENST00000395841 FOXO4P98177 505 aa13.52□□□□□ -0.24
RAE1-203ENST00000395841 LMBR1LQ6UX01 489 aa13.52□□□□□ -0.24
RAE1-203ENST00000395841 CWC25Q9NXE8 425 aaPredicted RBP13.52□□□□□ -0.24
RAE1-203ENST00000395841 SMC3Q9UQE7 1217 aa13.52□□□□□ -0.24
RAE1-203ENST00000395841 PAPPAQ13219 1627 aa13.52□□□□□ -0.25
RAE1-203ENST00000395841 SLC27A2O14975 620 aa13.52□□□□□ -0.25
RAE1-203ENST00000395841 PSMA5P28066 241 aa13.52□□□□□ -0.25
RAE1-203ENST00000395841 RNF20Q5VTR2 975 aa13.52□□□□□ -0.25
RAE1-203ENST00000395841 TTLL7Q6ZT98 887 aa13.52□□□□□ -0.25
RAE1-203ENST00000395841 RBM27Q9P2N5 1060 aaKnown RBP13.52□□□□□ -0.25
RAE1-203ENST00000395841 RFX7Q2KHR2 1363 aa13.52□□□□□ -0.25
RAE1-203ENST00000395841 JCADQ9P266 1359 aa13.52□□□□□ -0.25
RAE1-203ENST00000395841 TNS2Q63HR2 1409 aa13.52□□□□□ -0.25
RAE1-203ENST00000395841 SYTL4Q96C24 671 aaPredicted RBP13.51□□□□□ -0.25
RAE1-203ENST00000395841 LARP6Q9BRS8 491 aaKnown RBP13.51□□□□□ -0.25
RAE1-203ENST00000395841 TMEM63CQ9P1W3 806 aa13.51□□□□□ -0.25
RAE1-203ENST00000395841 ZSCAN22P10073 491 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms