RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 RNF20Q5VTR2 975 aa17.22■□□□□ 0.35
SREBF1-205ENST00000395757 CKAP2LQ8IYA6 745 aa17.22■□□□□ 0.35
SREBF1-205ENST00000395757 DBNDD2Q9BQY9 259 aa17.22■□□□□ 0.35
SREBF1-205ENST00000395757 USP31Q70CQ4 1352 aa17.22■□□□□ 0.35
SREBF1-205ENST00000395757 DDX21Q9NR30 783 aaKnown RBP eCLIP17.22■□□□□ 0.35
SREBF1-205ENST00000395757 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-205ENST00000395757 SYT1P21579 422 aa17.21■□□□□ 0.35
SREBF1-205ENST00000395757 A0A0D9SFI3 127 aa17.2■□□□□ 0.34
SREBF1-205ENST00000395757 FAM13BQ9NYF5 915 aa17.2■□□□□ 0.34
SREBF1-205ENST00000395757 MBD3O95983 291 aa17.2■□□□□ 0.34
SREBF1-205ENST00000395757 CCDC173Q0VFZ6 552 aa17.2■□□□□ 0.34
SREBF1-205ENST00000395757 PI4K2BQ8TCG2 481 aa17.2■□□□□ 0.34
SREBF1-205ENST00000395757 C19orf44Q9H6X5 657 aa17.2■□□□□ 0.34
SREBF1-205ENST00000395757 ERBB4Q15303 1308 aa17.2■□□□□ 0.34
SREBF1-205ENST00000395757 PLCD3Q8N3E9 789 aa17.2■□□□□ 0.34
SREBF1-205ENST00000395757 FMNL2Q96PY5 1086 aa17.2■□□□□ 0.34
SREBF1-205ENST00000395757 SNRPA1P09661 255 aaKnown RBP17.19■□□□□ 0.34
SREBF1-205ENST00000395757 TTLL7Q6ZT98 887 aa17.19■□□□□ 0.34
SREBF1-205ENST00000395757 EVI5LQ96CN4 794 aa17.19■□□□□ 0.34
SREBF1-205ENST00000395757 RUFY3Q7L099 469 aa17.18■□□□□ 0.34
SREBF1-205ENST00000395757 CREB3L3Q68CJ9 461 aa17.18■□□□□ 0.34
SREBF1-205ENST00000395757 OSBPL3Q9H4L5 887 aa17.18■□□□□ 0.34
SREBF1-205ENST00000395757 KIF24Q5T7B8 1368 aa17.18■□□□□ 0.34
SREBF1-205ENST00000395757 SASH1O94885 1247 aa17.18■□□□□ 0.34
SREBF1-205ENST00000395757 HSPA4P34932 840 aa17.18■□□□□ 0.34
SREBF1-205ENST00000395757 AGLP35573 1532 aa17.17■□□□□ 0.34
SREBF1-205ENST00000395757 RAD50Q92878 1312 aa17.17■□□□□ 0.34
SREBF1-205ENST00000395757 SLC52A2Q9HAB3 445 aa17.17■□□□□ 0.34
SREBF1-205ENST00000395757 ATP6V1DQ9Y5K8 247 aa17.17■□□□□ 0.34
SREBF1-205ENST00000395757 TAF6LQ9Y6J9 622 aa17.17■□□□□ 0.34
SREBF1-205ENST00000395757 GCKRQ14397 625 aa17.16■□□□□ 0.34
SREBF1-205ENST00000395757 BRF1Q92994 677 aa17.16■□□□□ 0.34
SREBF1-205ENST00000395757 ALDH1L1O75891 902 aa17.16■□□□□ 0.34
SREBF1-205ENST00000395757 IGKV5-2P06315 115 aa17.16■□□□□ 0.34
SREBF1-205ENST00000395757 ZNF589Q86UQ0 364 aaPredicted RBP17.16■□□□□ 0.34
SREBF1-205ENST00000395757 KDRP35968 1356 aa17.16■□□□□ 0.34
SREBF1-205ENST00000395757 ZSCAN22P10073 491 aaPredicted RBP17.16■□□□□ 0.34
SREBF1-205ENST00000395757 C17orf53Q8N3J3 647 aaPredicted RBP17.16■□□□□ 0.34
SREBF1-205ENST00000395757 ADCY9O60503 1353 aa17.15■□□□□ 0.34
SREBF1-205ENST00000395757 NPHP3Q7Z494 1330 aa17.15■□□□□ 0.34
SREBF1-205ENST00000395757 NEURL1BA8MQ27 555 aa17.15■□□□□ 0.34
SREBF1-205ENST00000395757 PHF14O94880 888 aa17.15■□□□□ 0.34
SREBF1-205ENST00000395757 COL9A3Q14050 684 aaPredicted RBP17.15■□□□□ 0.34
SREBF1-205ENST00000395757 FAM89AQ96GI7 184 aa17.15■□□□□ 0.34
SREBF1-205ENST00000395757 LSG1Q9H089 658 aaKnown RBP17.15■□□□□ 0.34
SREBF1-205ENST00000395757 PSMA5P28066 241 aa17.15■□□□□ 0.34
SREBF1-205ENST00000395757 DDIT3P35638 169 aa17.15■□□□□ 0.34
SREBF1-205ENST00000395757 KIAA2012Q0VF49 1180 aa17.15■□□□□ 0.34
SREBF1-205ENST00000395757 TECPR2O15040 1411 aa17.15■□□□□ 0.34
SREBF1-205ENST00000395757 ZRSR1Q15695 479 aaKnown RBP17.15■□□□□ 0.34
SREBF1-205ENST00000395757 CCDC171Q6TFL3 1326 aa17.14■□□□□ 0.33
SREBF1-205ENST00000395757 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.14■□□□□ 0.33
SREBF1-205ENST00000395757 ME3Q16798 604 aa17.14■□□□□ 0.33
SREBF1-205ENST00000395757 HELBQ8NG08 1087 aaPredicted RBP17.14■□□□□ 0.33
SREBF1-205ENST00000395757 STAP2Q9UGK3 403 aa17.14■□□□□ 0.33
SREBF1-205ENST00000395757 NPHP1O15259 732 aa17.14■□□□□ 0.33
SREBF1-205ENST00000395757 JAK2O60674 1132 aa17.14■□□□□ 0.33
SREBF1-205ENST00000395757 BRD1O95696 1058 aa17.14■□□□□ 0.33
SREBF1-205ENST00000395757 PHKG2P15735 406 aa17.14■□□□□ 0.33
SREBF1-205ENST00000395757 GNL2Q13823 731 aaKnown RBP17.14■□□□□ 0.33
SREBF1-205ENST00000395757 CCDC57Q2TAC2 916 aa17.14■□□□□ 0.33
SREBF1-205ENST00000395757 DLG5Q8TDM6 1919 aa17.13■□□□□ 0.33
SREBF1-205ENST00000395757 ERBB3P21860 1342 aa17.13■□□□□ 0.33
SREBF1-205ENST00000395757 IFIT1P09914 478 aaKnown RBP17.13■□□□□ 0.33
SREBF1-205ENST00000395757 ANAPC15P60006 121 aa17.13■□□□□ 0.33
SREBF1-205ENST00000395757 SF3A1Q15459 793 aaKnown RBP17.13■□□□□ 0.33
SREBF1-205ENST00000395757 LRSAM1Q6UWE0 723 aa17.13■□□□□ 0.33
SREBF1-205ENST00000395757 NUTM2BA6NNL0 878 aaPredicted RBP17.13■□□□□ 0.33
SREBF1-205ENST00000395757 NUTM2EB1AL46 878 aaPredicted RBP17.13■□□□□ 0.33
SREBF1-205ENST00000395757 CYP27B1O15528 508 aa17.13■□□□□ 0.33
SREBF1-205ENST00000395757 ZSCAN30Q86W11 494 aa17.13■□□□□ 0.33
SREBF1-205ENST00000395757 NUTM2AQ8IVF1 878 aaPredicted RBP17.13■□□□□ 0.33
SREBF1-205ENST00000395757 CEP126Q9P2H0 1117 aa17.13■□□□□ 0.33
SREBF1-205ENST00000395757 ADAMTS2O95450 1211 aa17.12■□□□□ 0.33
SREBF1-205ENST00000395757 TTC12Q9H892 705 aaPredicted RBP17.12■□□□□ 0.33
SREBF1-205ENST00000395757 ATP2B1P20020 1258 aa17.12■□□□□ 0.33
SREBF1-205ENST00000395757 NCOA5Q9HCD5 579 aaKnown RBP17.12■□□□□ 0.33
SREBF1-205ENST00000395757 CNNM1Q9NRU3 951 aa17.12■□□□□ 0.33
SREBF1-205ENST00000395757 IDH1O75874 414 aaKnown RBP17.12■□□□□ 0.33
SREBF1-205ENST00000395757 POLA2Q14181 598 aa17.12■□□□□ 0.33
SREBF1-205ENST00000395757 TTC39AQ5SRH9 613 aa17.12■□□□□ 0.33
SREBF1-205ENST00000395757 CCDC82Q8N4S0 544 aa17.12■□□□□ 0.33
SREBF1-205ENST00000395757 DIP2AQ14689 1571 aa17.12■□□□□ 0.33
SREBF1-205ENST00000395757 SLC27A2O14975 620 aa17.11■□□□□ 0.33
SREBF1-205ENST00000395757 F13A1P00488 732 aa17.11■□□□□ 0.33
SREBF1-205ENST00000395757 CCDC144CPQ8IYA2 1237 aa17.11■□□□□ 0.33
SREBF1-205ENST00000395757 ZCRB1Q8TBF4 217 aaKnown RBP17.11■□□□□ 0.33
SREBF1-205ENST00000395757 SPATA32Q96LK8 384 aa17.11■□□□□ 0.33
SREBF1-205ENST00000395757 TPCN1Q9ULQ1 816 aa17.11■□□□□ 0.33
SREBF1-205ENST00000395757 RRP12Q5JTH9 1297 aaKnown RBP17.11■□□□□ 0.33
SREBF1-205ENST00000395757 METTL22Q9BUU2 404 aaPredicted RBP17.11■□□□□ 0.33
SREBF1-205ENST00000395757 DBNLQ9UJU6 430 aaKnown RBP17.11■□□□□ 0.33
SREBF1-205ENST00000395757 IQSEC3Q9UPP2 1182 aaPredicted RBP17.11■□□□□ 0.33
SREBF1-205ENST00000395757 LRRC24Q50LG9 513 aa17.11■□□□□ 0.33
SREBF1-205ENST00000395757 CDC37L1Q7L3B6 337 aa17.11■□□□□ 0.33
SREBF1-205ENST00000395757 PUS3Q9BZE2 481 aaKnown RBP17.11■□□□□ 0.33
SREBF1-205ENST00000395757 KRT85P78386 507 aa17.1■□□□□ 0.33
SREBF1-205ENST00000395757 ITSN1Q15811 1721 aa17.1■□□□□ 0.33
SREBF1-205ENST00000395757 Q6ZUG5 572 aa17.1■□□□□ 0.33
SREBF1-205ENST00000395757 SYNE4Q8N205 404 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms