RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 TRAPPC3LQ5T215 181 aa18.92■□□□□ 0.62
PTPN20-206ENST00000395722 SUCLG2Q96I99 432 aa18.92■□□□□ 0.62
PTPN20-206ENST00000395722 EN1Q05925 392 aaPredicted RBP18.92■□□□□ 0.62
PTPN20-206ENST00000395722 ZNF827Q17R98 1081 aa18.92■□□□□ 0.62
PTPN20-206ENST00000395722 UBE3BQ7Z3V4 1068 aa18.92■□□□□ 0.62
PTPN20-206ENST00000395722 TUBGCP6Q96RT7 1819 aa18.91■□□□□ 0.62
PTPN20-206ENST00000395722 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.91■□□□□ 0.62
PTPN20-206ENST00000395722 PCCAP05165 728 aaPredicted RBP18.91■□□□□ 0.62
PTPN20-206ENST00000395722 GPTP24298 496 aa18.91■□□□□ 0.62
PTPN20-206ENST00000395722 EZH2Q15910 746 aaKnown RBP18.91■□□□□ 0.62
PTPN20-206ENST00000395722 CCDC125Q86Z20 511 aa18.91■□□□□ 0.62
PTPN20-206ENST00000395722 SMC5Q8IY18 1101 aa18.91■□□□□ 0.62
PTPN20-206ENST00000395722 SRP68Q9UHB9 627 aaKnown RBP18.91■□□□□ 0.62
PTPN20-206ENST00000395722 BAG6P46379 1132 aa18.9■□□□□ 0.62
PTPN20-206ENST00000395722 PARP10Q53GL7 1025 aa18.9■□□□□ 0.62
PTPN20-206ENST00000395722 SF3B2Q13435 895 aaKnown RBP18.9■□□□□ 0.62
PTPN20-206ENST00000395722 USPL1Q5W0Q7 1092 aa18.9■□□□□ 0.62
PTPN20-206ENST00000395722 ZBTB38Q8NAP3 1195 aaPredicted RBP18.9■□□□□ 0.62
PTPN20-206ENST00000395722 COL24A1Q17RW2 1714 aa18.9■□□□□ 0.62
PTPN20-206ENST00000395722 CDHR2Q9BYE9 1310 aa18.89■□□□□ 0.61
PTPN20-206ENST00000395722 ZPR1O75312 459 aa18.89■□□□□ 0.61
PTPN20-206ENST00000395722 HMMRO75330 724 aa18.89■□□□□ 0.61
PTPN20-206ENST00000395722 POLA2Q14181 598 aa18.89■□□□□ 0.61
PTPN20-206ENST00000395722 SSH3Q8TE77 659 aa18.89■□□□□ 0.61
PTPN20-206ENST00000395722 PNMA6EA0A0J9YXQ4 647 aa18.88■□□□□ 0.61
PTPN20-206ENST00000395722 PHF14O94880 888 aa18.88■□□□□ 0.61
PTPN20-206ENST00000395722 RFC4P35249 363 aa18.88■□□□□ 0.61
PTPN20-206ENST00000395722 RABL6Q3YEC7 729 aaPredicted RBP18.88■□□□□ 0.61
PTPN20-206ENST00000395722 EPHA10Q5JZY3 1008 aa18.88■□□□□ 0.61
PTPN20-206ENST00000395722 JARID2Q92833 1246 aaPredicted RBP18.88■□□□□ 0.61
PTPN20-206ENST00000395722 BICC1Q9H694 974 aaKnown RBP18.88■□□□□ 0.61
PTPN20-206ENST00000395722 PPP1R42Q7Z4L9 355 aa18.88■□□□□ 0.61
PTPN20-206ENST00000395722 PLA2G12BQ9BX93 195 aa18.88■□□□□ 0.61
PTPN20-206ENST00000395722 DCTPP1Q9H773 170 aa18.88■□□□□ 0.61
PTPN20-206ENST00000395722 NIP7Q9Y221 180 aaKnown RBP eCLIP18.88■□□□□ 0.61
PTPN20-206ENST00000395722 QSER1Q2KHR3 1735 aa18.87■□□□□ 0.61
PTPN20-206ENST00000395722 FOXO4P98177 505 aa18.86■□□□□ 0.61
PTPN20-206ENST00000395722 SUSD4Q5VX71 490 aa18.86■□□□□ 0.61
PTPN20-206ENST00000395722 GCC1Q96CN9 775 aa18.86■□□□□ 0.61
PTPN20-206ENST00000395722 TBC1D9BQ66K14 1250 aa18.86■□□□□ 0.61
PTPN20-206ENST00000395722 DEFB132Q7Z7B7 95 aa18.86■□□□□ 0.61
PTPN20-206ENST00000395722 FLAD1Q8NFF5 587 aa18.86■□□□□ 0.61
PTPN20-206ENST00000395722 NTSR2O95665 410 aa18.85■□□□□ 0.61
PTPN20-206ENST00000395722 FAM89AQ96GI7 184 aa18.85■□□□□ 0.61
PTPN20-206ENST00000395722 TFCP2L1Q9NZI6 479 aa18.85■□□□□ 0.61
PTPN20-206ENST00000395722 UTP14AQ9BVJ6 771 aaKnown RBP18.84■□□□□ 0.61
PTPN20-206ENST00000395722 ANO8Q9HCE9 1232 aaPredicted RBP18.84■□□□□ 0.61
PTPN20-206ENST00000395722 TRMT112Q9UI30 125 aaKnown RBP18.84■□□□□ 0.61
PTPN20-206ENST00000395722 LAMB2P55268 1798 aa18.84■□□□□ 0.61
PTPN20-206ENST00000395722 SRGAP3O43295 1099 aa18.84■□□□□ 0.61
PTPN20-206ENST00000395722 GYS1P13807 737 aa18.84■□□□□ 0.61
PTPN20-206ENST00000395722 COL23A1Q86Y22 540 aaPredicted RBP18.83■□□□□ 0.61
PTPN20-206ENST00000395722 SYNE4Q8N205 404 aa18.83■□□□□ 0.61
PTPN20-206ENST00000395722 PNPLA7Q6ZV29 1317 aa18.83■□□□□ 0.6
PTPN20-206ENST00000395722 SH3TC1Q8TE82 1336 aa18.83■□□□□ 0.6
PTPN20-206ENST00000395722 RTL5Q5HYW3 569 aaPredicted RBP18.82■□□□□ 0.6
PTPN20-206ENST00000395722 DDX60Q8IY21 1712 aaKnown RBP18.82■□□□□ 0.6
PTPN20-206ENST00000395722 SLC15A2Q16348 729 aa18.82■□□□□ 0.6
PTPN20-206ENST00000395722 IRS4O14654 1257 aaPredicted RBP18.81■□□□□ 0.6
PTPN20-206ENST00000395722 CSF1RP07333 972 aa18.81■□□□□ 0.6
PTPN20-206ENST00000395722 NUCB1Q02818 461 aa18.81■□□□□ 0.6
PTPN20-206ENST00000395722 SETDB2Q96T68 719 aa18.81■□□□□ 0.6
PTPN20-206ENST00000395722 PDZRN3Q9UPQ7 1066 aa18.81■□□□□ 0.6
PTPN20-206ENST00000395722 NOP58Q9Y2X3 529 aaKnown RBP18.81■□□□□ 0.6
PTPN20-206ENST00000395722 MYH3P11055 1940 aa18.81■□□□□ 0.6
PTPN20-206ENST00000395722 RFX5P48382 616 aaPredicted RBP18.81■□□□□ 0.6
PTPN20-206ENST00000395722 NFIXQ14938 502 aa18.81■□□□□ 0.6
PTPN20-206ENST00000395722 LMBR1LQ6UX01 489 aa18.81■□□□□ 0.6
PTPN20-206ENST00000395722 STK32BQ9NY57 414 aa18.81■□□□□ 0.6
PTPN20-206ENST00000395722 CARMIL3Q8ND23 1372 aa18.8■□□□□ 0.6
PTPN20-206ENST00000395722 TM4SF1P30408 202 aa18.79■□□□□ 0.6
PTPN20-206ENST00000395722 BICDL1Q6ZP65 573 aa18.79■□□□□ 0.6
PTPN20-206ENST00000395722 PDE8AO60658 829 aa18.79■□□□□ 0.6
PTPN20-206ENST00000395722 SLC10A5Q5PT55 438 aa18.79■□□□□ 0.6
PTPN20-206ENST00000395722 NYXQ9GZU5 481 aa18.79■□□□□ 0.6
PTPN20-206ENST00000395722 HSP90B1P14625 803 aaKnown RBP18.78■□□□□ 0.6
PTPN20-206ENST00000395722 CTSWP56202 376 aa18.78■□□□□ 0.6
PTPN20-206ENST00000395722 COPRSQ9NQ92 184 aa18.78■□□□□ 0.6
PTPN20-206ENST00000395722 FAM177BA6PVY3 158 aa18.77■□□□□ 0.6
PTPN20-206ENST00000395722 TTLL11Q8NHH1 800 aa18.77■□□□□ 0.6
PTPN20-206ENST00000395722 UPF1Q92900 1129 aaKnown RBP eCLIP18.77■□□□□ 0.6
PTPN20-206ENST00000395722 EXOC6BQ9Y2D4 811 aa18.77■□□□□ 0.6
PTPN20-206ENST00000395722 CHD1LQ86WJ1 897 aa18.77■□□□□ 0.59
PTPN20-206ENST00000395722 NUTM1Q86Y26 1132 aa18.77■□□□□ 0.59
PTPN20-206ENST00000395722 RAB11FIP3O75154 756 aa18.76■□□□□ 0.59
PTPN20-206ENST00000395722 SURF6O75683 361 aaKnown RBP18.76■□□□□ 0.59
PTPN20-206ENST00000395722 PTPN12Q05209 780 aaKnown RBP18.76■□□□□ 0.59
PTPN20-206ENST00000395722 ERFEQ4G0M1 354 aa18.76■□□□□ 0.59
PTPN20-206ENST00000395722 ANKRD45Q5TZF3 282 aa18.76■□□□□ 0.59
PTPN20-206ENST00000395722 NBPF5PQ86XG9 351 aaPredicted RBP18.76■□□□□ 0.59
PTPN20-206ENST00000395722 RIC1Q4ADV7 1423 aa18.76■□□□□ 0.59
PTPN20-206ENST00000395722 RTL9Q8NET4 1388 aa18.75■□□□□ 0.59
PTPN20-206ENST00000395722 ABCC12Q96J65 1359 aa18.75■□□□□ 0.59
PTPN20-206ENST00000395722 HCLS1P14317 486 aaPredicted RBP18.75■□□□□ 0.59
PTPN20-206ENST00000395722 HSP90AB4PQ58FF6 505 aa18.75■□□□□ 0.59
PTPN20-206ENST00000395722 TPTE2Q6XPS3 522 aa18.75■□□□□ 0.59
PTPN20-206ENST00000395722 SKAP1Q86WV1 359 aa18.75■□□□□ 0.59
PTPN20-206ENST00000395722 NLGN1Q8N2Q7 840 aa18.75■□□□□ 0.59
PTPN20-206ENST00000395722 PA2G4Q9UQ80 394 aaKnown RBP18.75■□□□□ 0.59
PTPN20-206ENST00000395722 NRXN2Q9P2S2 1712 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms