RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 NUP98P52948 1817 aa18.82■□□□□ 0.6
SCAF11-204ENST00000395454 GIGYF2Q6Y7W6 1299 aaKnown RBP18.82■□□□□ 0.6
SCAF11-204ENST00000395454 PDGFDQ9GZP0 370 aaPredicted RBP18.82■□□□□ 0.6
SCAF11-204ENST00000395454 BCORQ6W2J9 1755 aa18.82■□□□□ 0.6
SCAF11-204ENST00000395454 SCN7AQ01118 1682 aa18.82■□□□□ 0.6
SCAF11-204ENST00000395454 IBTKQ9P2D0 1353 aaPredicted RBP18.81■□□□□ 0.6
SCAF11-204ENST00000395454 MYD88Q99836 296 aa18.81■□□□□ 0.6
SCAF11-204ENST00000395454 NEXNQ0ZGT2 675 aa18.8■□□□□ 0.6
SCAF11-204ENST00000395454 PSDA5PKW4 1024 aaPredicted RBP18.8■□□□□ 0.6
SCAF11-204ENST00000395454 ATP5J2-PTCD1G3V325 749 aa18.8■□□□□ 0.6
SCAF11-204ENST00000395454 GNAI3P08754 354 aa18.8■□□□□ 0.6
SCAF11-204ENST00000395454 CLEC4GQ6UXB4 293 aa18.8■□□□□ 0.6
SCAF11-204ENST00000395454 METTL22Q9BUU2 404 aaPredicted RBP18.8■□□□□ 0.6
SCAF11-204ENST00000395454 BCL2L12Q9HB09 334 aa18.8■□□□□ 0.6
SCAF11-204ENST00000395454 GYS1P13807 737 aa18.79■□□□□ 0.6
SCAF11-204ENST00000395454 HSP90AB3PQ58FF7 597 aa18.79■□□□□ 0.6
SCAF11-204ENST00000395454 GPTP24298 496 aa18.78■□□□□ 0.6
SCAF11-204ENST00000395454 TCIRG1Q13488 830 aa18.78■□□□□ 0.6
SCAF11-204ENST00000395454 BICDL1Q6ZP65 573 aa18.78■□□□□ 0.6
SCAF11-204ENST00000395454 LNPKQ9C0E8 428 aa18.78■□□□□ 0.6
SCAF11-204ENST00000395454 NIP7Q9Y221 180 aaKnown RBP eCLIP18.78■□□□□ 0.6
SCAF11-204ENST00000395454 GNAI2P04899 355 aa18.77■□□□□ 0.6
SCAF11-204ENST00000395454 CWF19L2Q2TBE0 894 aaKnown RBP18.77■□□□□ 0.6
SCAF11-204ENST00000395454 TBC1D9BQ66K14 1250 aa18.77■□□□□ 0.6
SCAF11-204ENST00000395454 BEND3Q5T5X7 828 aa18.76■□□□□ 0.59
SCAF11-204ENST00000395454 MSL1Q68DK7 614 aa18.76■□□□□ 0.59
SCAF11-204ENST00000395454 SRCIN1Q9C0H9 1055 aa18.76■□□□□ 0.59
SCAF11-204ENST00000395454 ANKRD36CQ5JPF3 1778 aa18.76■□□□□ 0.59
SCAF11-204ENST00000395454 RGL2O15211 777 aa18.76■□□□□ 0.59
SCAF11-204ENST00000395454 HMMRO75330 724 aa18.76■□□□□ 0.59
SCAF11-204ENST00000395454 IGKV5-2P06315 115 aa18.76■□□□□ 0.59
SCAF11-204ENST00000395454 BMP2KLQ5H9B9 411 aa18.76■□□□□ 0.59
SCAF11-204ENST00000395454 ANKRD45Q5TZF3 282 aa18.76■□□□□ 0.59
SCAF11-204ENST00000395454 LINS1Q8NG48 757 aa18.76■□□□□ 0.59
SCAF11-204ENST00000395454 USP44Q9H0E7 712 aa18.76■□□□□ 0.59
SCAF11-204ENST00000395454 SETDB2Q96T68 719 aa18.75■□□□□ 0.59
SCAF11-204ENST00000395454 AFDNP55196 1824 aaKnown RBP18.75■□□□□ 0.59
SCAF11-204ENST00000395454 NEURL1BA8MQ27 555 aa18.74■□□□□ 0.59
SCAF11-204ENST00000395454 ZNF34Q8IZ26 560 aa18.74■□□□□ 0.59
SCAF11-204ENST00000395454 NLGN1Q8N2Q7 840 aa18.74■□□□□ 0.59
SCAF11-204ENST00000395454 ISCA1Q9BUE6 129 aa18.74■□□□□ 0.59
SCAF11-204ENST00000395454 UBN2Q6ZU65 1347 aa18.74■□□□□ 0.59
SCAF11-204ENST00000395454 FAM177BA6PVY3 158 aa18.74■□□□□ 0.59
SCAF11-204ENST00000395454 GOLGB1Q14789 3259 aaKnown RBP18.74■□□□□ 0.59
SCAF11-204ENST00000395454 NFIXQ14938 502 aa18.73■□□□□ 0.59
SCAF11-204ENST00000395454 SLC16A10Q8TF71 515 aa18.73■□□□□ 0.59
SCAF11-204ENST00000395454 ZBTB7AO95365 584 aa18.72■□□□□ 0.59
SCAF11-204ENST00000395454 NLRP10Q86W26 655 aa18.72■□□□□ 0.59
SCAF11-204ENST00000395454 CCDC191Q8NCU4 936 aa18.72■□□□□ 0.59
SCAF11-204ENST00000395454 DDRGK1Q96HY6 314 aa18.72■□□□□ 0.59
SCAF11-204ENST00000395454 CWC25Q9NXE8 425 aaPredicted RBP18.72■□□□□ 0.59
SCAF11-204ENST00000395454 NOP58Q9Y2X3 529 aaKnown RBP18.72■□□□□ 0.59
SCAF11-204ENST00000395454 ALDH1L1O75891 902 aa18.72■□□□□ 0.59
SCAF11-204ENST00000395454 SEC24BO95487 1268 aa18.72■□□□□ 0.59
SCAF11-204ENST00000395454 TRIM28Q13263 835 aaKnown RBP18.72■□□□□ 0.59
SCAF11-204ENST00000395454 CASZ1Q86V15 1759 aa18.72■□□□□ 0.59
SCAF11-204ENST00000395454 ATP8B2P98198 1209 aa18.71■□□□□ 0.59
SCAF11-204ENST00000395454 GCKRQ14397 625 aa18.71■□□□□ 0.59
SCAF11-204ENST00000395454 PARP10Q53GL7 1025 aa18.71■□□□□ 0.59
SCAF11-204ENST00000395454 CARMIL3Q8ND23 1372 aa18.71■□□□□ 0.59
SCAF11-204ENST00000395454 MMP10P09238 476 aa18.7■□□□□ 0.58
SCAF11-204ENST00000395454 RTL5Q5HYW3 569 aaPredicted RBP18.7■□□□□ 0.58
SCAF11-204ENST00000395454 SUSD4Q5VX71 490 aa18.7■□□□□ 0.58
SCAF11-204ENST00000395454 C9orf78Q9NZ63 289 aaPredicted RBP18.7■□□□□ 0.58
SCAF11-204ENST00000395454 NPHP1O15259 732 aa18.7■□□□□ 0.58
SCAF11-204ENST00000395454 TM4SF1P30408 202 aa18.7■□□□□ 0.58
SCAF11-204ENST00000395454 PPP1R42Q7Z4L9 355 aa18.7■□□□□ 0.58
SCAF11-204ENST00000395454 UBTFL1P0CB47 393 aaPredicted RBP18.69■□□□□ 0.58
SCAF11-204ENST00000395454 NBPF5PQ86XG9 351 aaPredicted RBP18.69■□□□□ 0.58
SCAF11-204ENST00000395454 MTFR1LQ9H019 292 aa18.69■□□□□ 0.58
SCAF11-204ENST00000395454 TRMT112Q9UI30 125 aaKnown RBP18.69■□□□□ 0.58
SCAF11-204ENST00000395454 DDR1Q08345 913 aa18.68■□□□□ 0.58
SCAF11-204ENST00000395454 PLEKHM2Q8IWE5 1019 aa18.68■□□□□ 0.58
SCAF11-204ENST00000395454 JARID2Q92833 1246 aaPredicted RBP18.68■□□□□ 0.58
SCAF11-204ENST00000395454 UTP14AQ9BVJ6 771 aaKnown RBP18.68■□□□□ 0.58
SCAF11-204ENST00000395454 ATF5Q9Y2D1 282 aaPredicted RBP18.68■□□□□ 0.58
SCAF11-204ENST00000395454 GRM8O00222 908 aa18.68■□□□□ 0.58
SCAF11-204ENST00000395454 POLRMTO00411 1230 aaKnown RBP18.68■□□□□ 0.58
SCAF11-204ENST00000395454 GTF2E1P29083 439 aaPredicted RBP18.68■□□□□ 0.58
SCAF11-204ENST00000395454 SSH3Q8TE77 659 aa18.68■□□□□ 0.58
SCAF11-204ENST00000395454 FAM89AQ96GI7 184 aa18.68■□□□□ 0.58
SCAF11-204ENST00000395454 TBC1D32Q96NH3 1257 aa18.68■□□□□ 0.58
SCAF11-204ENST00000395454 LRRFIP2Q9Y608 721 aaKnown RBP18.68■□□□□ 0.58
SCAF11-204ENST00000395454 UTYO14607 1347 aa18.67■□□□□ 0.58
SCAF11-204ENST00000395454 COL24A1Q17RW2 1714 aa18.67■□□□□ 0.58
SCAF11-204ENST00000395454 NBPF7P0C2Y1 421 aaPredicted RBP18.67■□□□□ 0.58
SCAF11-204ENST00000395454 UBE3BQ7Z3V4 1068 aa18.67■□□□□ 0.58
SCAF11-204ENST00000395454 NUTM1Q86Y26 1132 aa18.67■□□□□ 0.58
SCAF11-204ENST00000395454 ZBTB38Q8NAP3 1195 aaPredicted RBP18.67■□□□□ 0.58
SCAF11-204ENST00000395454 PARP3Q9Y6F1 533 aa18.67■□□□□ 0.58
SCAF11-204ENST00000395454 NTSR2O95665 410 aa18.66■□□□□ 0.58
SCAF11-204ENST00000395454 SERPINB2P05120 415 aa18.66■□□□□ 0.58
SCAF11-204ENST00000395454 POLA2Q14181 598 aa18.66■□□□□ 0.58
SCAF11-204ENST00000395454 TPTE2Q6XPS3 522 aa18.66■□□□□ 0.58
SCAF11-204ENST00000395454 NYXQ9GZU5 481 aa18.66■□□□□ 0.58
SCAF11-204ENST00000395454 ZBTB47Q9UFB7 747 aaPredicted RBP18.66■□□□□ 0.58
SCAF11-204ENST00000395454 PNMA6EA0A0J9YXQ4 647 aa18.66■□□□□ 0.58
SCAF11-204ENST00000395454 MTX1Q13505 466 aa18.66■□□□□ 0.58
SCAF11-204ENST00000395454 CNBD1Q8NA66 436 aa18.66■□□□□ 0.58
SCAF11-204ENST00000395454 SH3TC1Q8TE82 1336 aa18.66■□□□□ 0.58
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