RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 RNF123Q5XPI4 1314 aa17.22■□□□□ 0.35
HLA-DMA-202ENST00000395303 GOLGA2Q08379 1002 aa17.22■□□□□ 0.35
HLA-DMA-202ENST00000395303 STYK1Q6J9G0 422 aa17.22■□□□□ 0.35
HLA-DMA-202ENST00000395303 PPP1R42Q7Z4L9 355 aa17.22■□□□□ 0.35
HLA-DMA-202ENST00000395303 TTLL6Q8N841 843 aa17.22■□□□□ 0.35
HLA-DMA-202ENST00000395303 PHAXQ9H814 394 aaKnown RBP17.22■□□□□ 0.35
HLA-DMA-202ENST00000395303 ABCC12Q96J65 1359 aa17.22■□□□□ 0.35
HLA-DMA-202ENST00000395303 VAMP4O75379 141 aa17.21■□□□□ 0.35
HLA-DMA-202ENST00000395303 TOMM70O94826 608 aa17.21■□□□□ 0.35
HLA-DMA-202ENST00000395303 C9orf131Q5VYM1 1079 aa17.21■□□□□ 0.35
HLA-DMA-202ENST00000395303 MIER1Q8N108 512 aa17.21■□□□□ 0.35
HLA-DMA-202ENST00000395303 MASTLQ96GX5 879 aa17.21■□□□□ 0.35
HLA-DMA-202ENST00000395303 ISCA1Q9BUE6 129 aa17.21■□□□□ 0.35
HLA-DMA-202ENST00000395303 MYH16Q9H6N6 1097 aa17.21■□□□□ 0.35
HLA-DMA-202ENST00000395303 FAM177BA6PVY3 158 aa17.2■□□□□ 0.34
HLA-DMA-202ENST00000395303 EXOSC9Q06265 439 aaKnown RBP17.2■□□□□ 0.34
HLA-DMA-202ENST00000395303 CRY2Q49AN0 593 aa17.2■□□□□ 0.34
HLA-DMA-202ENST00000395303 ERFEQ4G0M1 354 aa17.2■□□□□ 0.34
HLA-DMA-202ENST00000395303 SLC10A5Q5PT55 438 aa17.2■□□□□ 0.34
HLA-DMA-202ENST00000395303 NLRP10Q86W26 655 aa17.2■□□□□ 0.34
HLA-DMA-202ENST00000395303 MYH3P11055 1940 aa17.19■□□□□ 0.34
HLA-DMA-202ENST00000395303 APLP1P51693 650 aa17.19■□□□□ 0.34
HLA-DMA-202ENST00000395303 TRIM28Q13263 835 aaKnown RBP17.19■□□□□ 0.34
HLA-DMA-202ENST00000395303 NUTM1Q86Y26 1132 aa17.19■□□□□ 0.34
HLA-DMA-202ENST00000395303 CNKSR1Q969H4 720 aa17.19■□□□□ 0.34
HLA-DMA-202ENST00000395303 UTP14AQ9BVJ6 771 aaKnown RBP17.19■□□□□ 0.34
HLA-DMA-202ENST00000395303 TAF1P21675 1872 aa17.18■□□□□ 0.34
HLA-DMA-202ENST00000395303 NPR1P16066 1061 aa17.18■□□□□ 0.34
HLA-DMA-202ENST00000395303 GTF2E1P29083 439 aaPredicted RBP17.18■□□□□ 0.34
HLA-DMA-202ENST00000395303 ZNF622Q969S3 477 aaKnown RBP eCLIP17.18■□□□□ 0.34
HLA-DMA-202ENST00000395303 STK31Q9BXU1 1019 aa17.18■□□□□ 0.34
HLA-DMA-202ENST00000395303 WDR90Q96KV7 1748 aa17.18■□□□□ 0.34
HLA-DMA-202ENST00000395303 DNAJC5GQ8N7S2 189 aa17.17■□□□□ 0.34
HLA-DMA-202ENST00000395303 DDX58O95786 925 aaKnown RBP17.16■□□□□ 0.34
HLA-DMA-202ENST00000395303 RIC3Q7Z5B4 369 aa17.16■□□□□ 0.34
HLA-DMA-202ENST00000395303 RNF181Q9P0P0 153 aa17.16■□□□□ 0.34
HLA-DMA-202ENST00000395303 E9PSI1 815 aa17.15■□□□□ 0.34
HLA-DMA-202ENST00000395303 SLC4A2P04920 1241 aa17.15■□□□□ 0.34
HLA-DMA-202ENST00000395303 HOXA10P31260 410 aaPredicted RBP17.15■□□□□ 0.34
HLA-DMA-202ENST00000395303 SLFN5Q08AF3 891 aa17.15■□□□□ 0.34
HLA-DMA-202ENST00000395303 PRPF40BQ6NWY9 871 aaKnown RBP17.15■□□□□ 0.34
HLA-DMA-202ENST00000395303 G2E3Q7L622 706 aa17.15■□□□□ 0.34
HLA-DMA-202ENST00000395303 TRMT2AQ8IZ69 625 aaKnown RBP17.15■□□□□ 0.34
HLA-DMA-202ENST00000395303 RBM46Q8TBY0 533 aaKnown RBP17.15■□□□□ 0.34
HLA-DMA-202ENST00000395303 C7orf43Q8WVR3 580 aa17.15■□□□□ 0.34
HLA-DMA-202ENST00000395303 KSR2Q6VAB6 950 aa17.14■□□□□ 0.33
HLA-DMA-202ENST00000395303 METTL22Q9BUU2 404 aaPredicted RBP17.14■□□□□ 0.33
HLA-DMA-202ENST00000395303 TRMT112Q9UI30 125 aaKnown RBP17.14■□□□□ 0.33
HLA-DMA-202ENST00000395303 SH3TC1Q8TE82 1336 aa17.14■□□□□ 0.33
HLA-DMA-202ENST00000395303 TIAM2Q8IVF5 1701 aa17.13■□□□□ 0.33
HLA-DMA-202ENST00000395303 ATP5J2-PTCD1G3V325 749 aa17.13■□□□□ 0.33
HLA-DMA-202ENST00000395303 TCERG1O14776 1098 aaKnown RBP17.13■□□□□ 0.33
HLA-DMA-202ENST00000395303 ALDH1B1P30837 517 aa17.13■□□□□ 0.33
HLA-DMA-202ENST00000395303 PRELPP51888 382 aa17.13■□□□□ 0.33
HLA-DMA-202ENST00000395303 C3orf67Q6ZVT6 689 aa17.13■□□□□ 0.33
HLA-DMA-202ENST00000395303 CCDC191Q8NCU4 936 aa17.13■□□□□ 0.33
HLA-DMA-202ENST00000395303 CRAMP1Q96RY5 1269 aa17.13■□□□□ 0.33
HLA-DMA-202ENST00000395303 SNED1Q8TER0 1413 aa17.13■□□□□ 0.33
HLA-DMA-202ENST00000395303 PI4KAP2A4QPH2 592 aa17.12■□□□□ 0.33
HLA-DMA-202ENST00000395303 C21orf2O43822 256 aa17.12■□□□□ 0.33
HLA-DMA-202ENST00000395303 RASSF7Q02833 373 aa17.12■□□□□ 0.33
HLA-DMA-202ENST00000395303 FLIIQ13045 1269 aa17.12■□□□□ 0.33
HLA-DMA-202ENST00000395303 SOGA3Q5TF21 947 aa17.12■□□□□ 0.33
HLA-DMA-202ENST00000395303 SYNE4Q8N205 404 aa17.12■□□□□ 0.33
HLA-DMA-202ENST00000395303 PI4KAP1Q8N8J0 262 aa17.12■□□□□ 0.33
HLA-DMA-202ENST00000395303 NLRP3Q96P20 1036 aa17.12■□□□□ 0.33
HLA-DMA-202ENST00000395303 MYD88Q99836 296 aa17.12■□□□□ 0.33
HLA-DMA-202ENST00000395303 MAP3K2Q9Y2U5 619 aa17.12■□□□□ 0.33
HLA-DMA-202ENST00000395303 KDM2BQ8NHM5 1336 aa17.12■□□□□ 0.33
HLA-DMA-202ENST00000395303 LTBP3Q9NS15 1303 aa17.12■□□□□ 0.33
HLA-DMA-202ENST00000395303 NFKBIEO00221 500 aa17.11■□□□□ 0.33
HLA-DMA-202ENST00000395303 LRRC37AA6NMS7 1700 aa17.1■□□□□ 0.33
HLA-DMA-202ENST00000395303 FSTL1Q12841 308 aa17.1■□□□□ 0.33
HLA-DMA-202ENST00000395303 ZBTB38Q8NAP3 1195 aaPredicted RBP17.1■□□□□ 0.33
HLA-DMA-202ENST00000395303 RPGRQ92834 1020 aaKnown RBP17.1■□□□□ 0.33
HLA-DMA-202ENST00000395303 CDCA7LQ96GN5 454 aa17.1■□□□□ 0.33
HLA-DMA-202ENST00000395303 ZC3H4Q9UPT8 1303 aaKnown RBP17.1■□□□□ 0.33
HLA-DMA-202ENST00000395303 PCCAP05165 728 aaPredicted RBP17.09■□□□□ 0.33
HLA-DMA-202ENST00000395303 IGKV5-2P06315 115 aa17.09■□□□□ 0.33
HLA-DMA-202ENST00000395303 HCLS1P14317 486 aaPredicted RBP17.09■□□□□ 0.33
HLA-DMA-202ENST00000395303 SF3B3Q15393 1217 aaKnown RBP17.09■□□□□ 0.33
HLA-DMA-202ENST00000395303 ZNF428Q96B54 188 aa17.09■□□□□ 0.33
HLA-DMA-202ENST00000395303 RBM17Q96I25 401 aaKnown RBP17.09■□□□□ 0.33
HLA-DMA-202ENST00000395303 RRAGCQ9HB90 399 aa17.09■□□□□ 0.33
HLA-DMA-202ENST00000395303 LMNB1P20700 586 aa17.08■□□□□ 0.32
HLA-DMA-202ENST00000395303 HTRA3P83110 453 aa17.08■□□□□ 0.32
HLA-DMA-202ENST00000395303 CCDC93Q567U6 631 aa17.08■□□□□ 0.32
HLA-DMA-202ENST00000395303 C16orf71Q8IYS4 520 aaPredicted RBP17.08■□□□□ 0.32
HLA-DMA-202ENST00000395303 FAM89AQ96GI7 184 aa17.08■□□□□ 0.32
HLA-DMA-202ENST00000395303 CWC25Q9NXE8 425 aaPredicted RBP17.08■□□□□ 0.32
HLA-DMA-202ENST00000395303 CDHR2Q9BYE9 1310 aa17.07■□□□□ 0.32
HLA-DMA-202ENST00000395303 FKBP5Q13451 457 aaPredicted RBP17.07■□□□□ 0.32
HLA-DMA-202ENST00000395303 CC2D2BQ6DHV5 1058 aa17.07■□□□□ 0.32
HLA-DMA-202ENST00000395303 DNAAF4Q8WXU2 420 aa17.07■□□□□ 0.32
HLA-DMA-202ENST00000395303 ZNF219Q9P2Y4 722 aaPredicted RBP17.07■□□□□ 0.32
HLA-DMA-202ENST00000395303 ABCC4O15439 1325 aa17.06■□□□□ 0.32
HLA-DMA-202ENST00000395303 NEURL1BA8MQ27 555 aa17.06■□□□□ 0.32
HLA-DMA-202ENST00000395303 IRS4O14654 1257 aaPredicted RBP17.06■□□□□ 0.32
HLA-DMA-202ENST00000395303 CT47B1P0C2W7 299 aaPredicted RBP17.06■□□□□ 0.32
HLA-DMA-202ENST00000395303 NEXNQ0ZGT2 675 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms