RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 TSPAN6O43657 245 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 KIF20AO95235 890 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 XRCC5P13010 732 aaKnown RBP5.1□□□□□ -1.59
HERC4-204ENST00000395198 ADD2P35612 726 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 GEMIN4P57678 1058 aaKnown RBP5.1□□□□□ -1.59
HERC4-204ENST00000395198 SLC10A5Q5PT55 438 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 KCNV1Q6PIU1 500 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 UNC5DQ6UXZ4 953 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.1□□□□□ -1.59
HERC4-204ENST00000395198 SAMD14Q8IZD0 417 aaPredicted RBP5.1□□□□□ -1.59
HERC4-204ENST00000395198 SMARCC1Q92922 1105 aaPredicted RBP5.1□□□□□ -1.59
HERC4-204ENST00000395198 ZNF496Q96IT1 587 aaPredicted RBP5.1□□□□□ -1.59
HERC4-204ENST00000395198 TMEM110-MUSTN1A8MSY1 372 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 IPO7O95373 1038 aaKnown RBP5.1□□□□□ -1.59
HERC4-204ENST00000395198 SLC7A5Q01650 507 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 SLC4A8Q2Y0W8 1093 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 C11orf91Q3C1V1 193 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 SOGA3Q5TF21 947 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 ARHGEF25Q86VW2 580 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 SNX32Q86XE0 403 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 ZNF713Q8N859 430 aaPredicted RBP5.1□□□□□ -1.59
HERC4-204ENST00000395198 LZTS2Q9BRK4 669 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 DHX36Q9H2U1 1008 aaKnown RBP5.1□□□□□ -1.59
HERC4-204ENST00000395198 RIC8AQ9NPQ8 531 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 NLRP2Q9NX02 1062 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 DCAF16Q9NXF7 216 aa5.1□□□□□ -1.59
HERC4-204ENST00000395198 NPHP1O15259 732 aa5.09□□□□□ -1.59
HERC4-204ENST00000395198 CTHP32929 405 aa5.09□□□□□ -1.59
HERC4-204ENST00000395198 ECM1Q16610 540 aa5.09□□□□□ -1.59
HERC4-204ENST00000395198 DALRD3Q5D0E6 543 aaKnown RBP5.09□□□□□ -1.59
HERC4-204ENST00000395198 FAM83BQ5T0W9 1011 aa5.09□□□□□ -1.59
HERC4-204ENST00000395198 AGAP9Q5VTM2 703 aa5.09□□□□□ -1.59
HERC4-204ENST00000395198 CDCA2Q69YH5 1023 aaPredicted RBP5.09□□□□□ -1.59
HERC4-204ENST00000395198 E2F7Q96AV8 911 aa5.09□□□□□ -1.59
HERC4-204ENST00000395198 MAP3K14Q99558 947 aa5.09□□□□□ -1.59
HERC4-204ENST00000395198 N6AMT1Q9Y5N5 214 aa5.09□□□□□ -1.59
HERC4-204ENST00000395198 WASHC2AQ641Q2 1341 aa5.09□□□□□ -1.59
HERC4-204ENST00000395198 SHROOM1Q2M3G4 852 aaPredicted RBP5.09□□□□□ -1.59
HERC4-204ENST00000395198 ZNF449Q6P9G9 518 aa5.09□□□□□ -1.59
HERC4-204ENST00000395198 MILR1Q7Z6M3 343 aa5.09□□□□□ -1.59
HERC4-204ENST00000395198 IPCEF1Q8WWN9 437 aaPredicted RBP5.09□□□□□ -1.59
HERC4-204ENST00000395198 VPS33BQ9H267 617 aa5.09□□□□□ -1.59
HERC4-204ENST00000395198 IL16Q14005 1332 aa5.09□□□□□ -1.59
HERC4-204ENST00000395198 SMARCA4P51532 1647 aa5.09□□□□□ -1.59
HERC4-204ENST00000395198 BRDTQ58F21 947 aaPredicted RBP5.09□□□□□ -1.59
HERC4-204ENST00000395198 PLBD1Q6P4A8 553 aa5.09□□□□□ -1.59
HERC4-204ENST00000395198 HDGFL2Q7Z4V5 671 aaPredicted RBP5.09□□□□□ -1.59
HERC4-204ENST00000395198 PRPF38AQ8NAV1 312 aaKnown RBP5.09□□□□□ -1.59
HERC4-204ENST00000395198 SMCR8Q8TEV9 937 aaPredicted RBP5.09□□□□□ -1.59
HERC4-204ENST00000395198 TMUB1Q9BVT8 246 aa5.09□□□□□ -1.59
HERC4-204ENST00000395198 TGIF2Q9GZN2 237 aa5.09□□□□□ -1.59
HERC4-204ENST00000395198 ABCG4Q9H172 646 aa5.09□□□□□ -1.59
HERC4-204ENST00000395198 TSPYL2Q9H2G4 693 aaPredicted RBP5.09□□□□□ -1.59
HERC4-204ENST00000395198 NGRNQ9NPE2 291 aaKnown RBP5.09□□□□□ -1.59
HERC4-204ENST00000395198 ZNF853P0CG23 659 aa5.09□□□□□ -1.6
HERC4-204ENST00000395198 XBP1P17861 261 aa5.09□□□□□ -1.6
HERC4-204ENST00000395198 STIP1P31948 543 aaKnown RBP5.09□□□□□ -1.6
HERC4-204ENST00000395198 ITM2BQ9Y287 266 aa5.09□□□□□ -1.6
HERC4-204ENST00000395198 PLEKHG4Q58EX7 1191 aa5.08□□□□□ -1.6
HERC4-204ENST00000395198 MCM10Q7L590 875 aa5.08□□□□□ -1.6
HERC4-204ENST00000395198 PAWRQ96IZ0 340 aaKnown RBP5.08□□□□□ -1.6
HERC4-204ENST00000395198 USP25Q9UHP3 1055 aa5.08□□□□□ -1.6
HERC4-204ENST00000395198 OATP04181 439 aa5.08□□□□□ -1.6
HERC4-204ENST00000395198 SMARCA1P28370 1054 aa5.08□□□□□ -1.6
HERC4-204ENST00000395198 NUBP1P53384 320 aa5.08□□□□□ -1.6
HERC4-204ENST00000395198 UTP6Q9NYH9 597 aaKnown RBP5.08□□□□□ -1.6
HERC4-204ENST00000395198 BIN2Q9UBW5 565 aaPredicted RBP5.08□□□□□ -1.6
HERC4-204ENST00000395198 PRRT4C9JH25 899 aa5.08□□□□□ -1.6
HERC4-204ENST00000395198 RHOBTB3O94955 611 aa5.08□□□□□ -1.6
HERC4-204ENST00000395198 EPB42P16452 691 aa5.08□□□□□ -1.6
HERC4-204ENST00000395198 SERINC3Q13530 473 aa5.08□□□□□ -1.6
HERC4-204ENST00000395198 GIMAP8Q8ND71 665 aaPredicted RBP5.08□□□□□ -1.6
HERC4-204ENST00000395198 SH3TC2Q8TF17 1288 aa5.08□□□□□ -1.6
HERC4-204ENST00000395198 RWDD1Q9H446 243 aaPredicted RBP5.08□□□□□ -1.6
HERC4-204ENST00000395198 ESF1Q9H501 851 aaKnown RBP5.08□□□□□ -1.6
HERC4-204ENST00000395198 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.08□□□□□ -1.6
HERC4-204ENST00000395198 MAFBQ9Y5Q3 323 aaPredicted RBP5.08□□□□□ -1.6
HERC4-204ENST00000395198 FAM221BA6H8Z2 402 aa5.07□□□□□ -1.6
HERC4-204ENST00000395198 ELL2O00472 640 aaPredicted RBP5.07□□□□□ -1.6
HERC4-204ENST00000395198 DIAPH1O60610 1272 aaKnown RBP5.07□□□□□ -1.6
HERC4-204ENST00000395198 NCAM1P13591 858 aa5.07□□□□□ -1.6
HERC4-204ENST00000395198 CAMK2BQ13554 666 aa5.07□□□□□ -1.6
HERC4-204ENST00000395198 PKN2Q16513 984 aaKnown RBP5.07□□□□□ -1.6
HERC4-204ENST00000395198 GRAMD1BQ3KR37 738 aa5.07□□□□□ -1.6
HERC4-204ENST00000395198 CCDC73Q6ZRK6 1079 aa5.07□□□□□ -1.6
HERC4-204ENST00000395198 METTL3Q86U44 580 aaKnown RBP5.07□□□□□ -1.6
HERC4-204ENST00000395198 IFNL3Q8IZI9 196 aa5.07□□□□□ -1.6
HERC4-204ENST00000395198 TEX19Q8NA77 164 aa5.07□□□□□ -1.6
HERC4-204ENST00000395198 MIGA1Q8NAN2 632 aa5.07□□□□□ -1.6
HERC4-204ENST00000395198 NLRP7Q8WX94 980 aa5.07□□□□□ -1.6
HERC4-204ENST00000395198 PGBD4Q96DM1 585 aa5.07□□□□□ -1.6
HERC4-204ENST00000395198 PHOX2BQ99453 314 aa5.07□□□□□ -1.6
HERC4-204ENST00000395198 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.07□□□□□ -1.63e-7■■■□□ 18.5
HERC4-204ENST00000395198 ZSWIM6Q9HCJ5 1215 aa5.07□□□□□ -1.6
HERC4-204ENST00000395198 CHCHD3Q9NX63 227 aaKnown RBP5.07□□□□□ -1.6
HERC4-204ENST00000395198 RABGAP1Q9Y3P9 1069 aa5.07□□□□□ -1.6
HERC4-204ENST00000395198 MYL3P08590 195 aa5.07□□□□□ -1.6
HERC4-204ENST00000395198 FAM69CQ0P6D2 419 aa5.07□□□□□ -1.6
HERC4-204ENST00000395198 KLHL10Q6JEL2 608 aa5.07□□□□□ -1.6
HERC4-204ENST00000395198 JPH3Q8WXH2 748 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms