RNA–Protein interactions for RNA: ENST00000395131.5

PFDN6-204, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-204ENST00000395131 PCGF6Q9BYE7 350 aa18.84■□□□□ 0.61
PFDN6-204ENST00000395131 RNF186Q9NXI6 227 aa18.84■□□□□ 0.61
PFDN6-204ENST00000395131 SIPA1L3O60292 1781 aaPredicted RBP18.83■□□□□ 0.61
PFDN6-204ENST00000395131 A1BGP04217 495 aa18.83■□□□□ 0.6
PFDN6-204ENST00000395131 CRY2Q49AN0 593 aa18.83■□□□□ 0.6
PFDN6-204ENST00000395131 ZNF790Q6PG37 636 aa18.83■□□□□ 0.6
PFDN6-204ENST00000395131 HUNKP57058 714 aa18.82■□□□□ 0.6
PFDN6-204ENST00000395131 PKN2Q16513 984 aaKnown RBP18.82■□□□□ 0.6
PFDN6-204ENST00000395131 RGMBQ6NW40 437 aa18.82■□□□□ 0.6
PFDN6-204ENST00000395131 TRPA1O75762 1119 aa18.81■□□□□ 0.6
PFDN6-204ENST00000395131 KIF23Q02241 960 aaPredicted RBP18.81■□□□□ 0.6
PFDN6-204ENST00000395131 TRIM26Q12899 539 aaPredicted RBP18.81■□□□□ 0.6
PFDN6-204ENST00000395131 CCDC102AQ96A19 550 aa18.81■□□□□ 0.6
PFDN6-204ENST00000395131 VPS33BQ9H267 617 aa18.81■□□□□ 0.6
PFDN6-204ENST00000395131 ZNF408Q9H9D4 720 aa18.81■□□□□ 0.6
PFDN6-204ENST00000395131 ZNF652Q9Y2D9 606 aa18.81■□□□□ 0.6
PFDN6-204ENST00000395131 CDHR2Q9BYE9 1310 aa18.8■□□□□ 0.6
PFDN6-204ENST00000395131 HIRAP54198 1017 aaPredicted RBP18.8■□□□□ 0.6
PFDN6-204ENST00000395131 MTHFSDQ2M296 383 aaKnown RBP18.8■□□□□ 0.6
PFDN6-204ENST00000395131 NIM1KQ8IY84 436 aa18.79■□□□□ 0.6
PFDN6-204ENST00000395131 NPC1L1Q9UHC9 1359 aa18.79■□□□□ 0.6
PFDN6-204ENST00000395131 HOXA10P31260 410 aaPredicted RBP18.78■□□□□ 0.6
PFDN6-204ENST00000395131 FXR1P51114 621 aaKnown RBP eCLIP18.78■□□□□ 0.6
PFDN6-204ENST00000395131 FMNL2Q96PY5 1086 aa18.78■□□□□ 0.6
PFDN6-204ENST00000395131 POLR2AP24928 1970 aaKnown RBP18.77■□□□□ 0.6
PFDN6-204ENST00000395131 CXCL9Q07325 125 aa18.77■□□□□ 0.6
PFDN6-204ENST00000395131 NIP7Q9Y221 180 aaKnown RBP eCLIP18.77■□□□□ 0.6
PFDN6-204ENST00000395131 REM2Q8IYK8 340 aaPredicted RBP18.76■□□□□ 0.59
PFDN6-204ENST00000395131 CSRNP1Q96S65 589 aa18.76■□□□□ 0.59
PFDN6-204ENST00000395131 ZNRF3Q9ULT6 936 aa18.76■□□□□ 0.59
PFDN6-204ENST00000395131 KIF7Q2M1P5 1343 aa18.75■□□□□ 0.59
PFDN6-204ENST00000395131 GMPSP49915 693 aaPredicted RBP18.75■□□□□ 0.59
PFDN6-204ENST00000395131 RIC1Q4ADV7 1423 aa18.74■□□□□ 0.59
PFDN6-204ENST00000395131 PPIP5K2O43314 1243 aa18.73■□□□□ 0.59
PFDN6-204ENST00000395131 USP48Q86UV5 1035 aa18.73■□□□□ 0.59
PFDN6-204ENST00000395131 IL17REQ8NFR9 667 aa18.73■□□□□ 0.59
PFDN6-204ENST00000395131 GBA2Q9HCG7 927 aaPredicted RBP18.73■□□□□ 0.59
PFDN6-204ENST00000395131 USP16Q9Y5T5 823 aa18.73■□□□□ 0.59
PFDN6-204ENST00000395131 SLC10A3P09131 477 aa18.72■□□□□ 0.59
PFDN6-204ENST00000395131 ZNF157P51786 506 aaPredicted RBP18.72■□□□□ 0.59
PFDN6-204ENST00000395131 TEFQ10587 303 aa18.72■□□□□ 0.59
PFDN6-204ENST00000395131 C2orf69Q8N8R5 385 aa18.72■□□□□ 0.59
PFDN6-204ENST00000395131 TRPM4Q8TD43 1214 aa18.72■□□□□ 0.59
PFDN6-204ENST00000395131 CRAMP1Q96RY5 1269 aa18.72■□□□□ 0.59
PFDN6-204ENST00000395131 HMOX1P09601 288 aa18.71■□□□□ 0.59
PFDN6-204ENST00000395131 GTF2E1P29083 439 aaPredicted RBP18.71■□□□□ 0.59
PFDN6-204ENST00000395131 AOC3Q16853 763 aa18.71■□□□□ 0.59
PFDN6-204ENST00000395131 MORC1Q86VD1 984 aa18.71■□□□□ 0.59
PFDN6-204ENST00000395131 FAM177BA6PVY3 158 aa18.7■□□□□ 0.58
PFDN6-204ENST00000395131 RTFDC1Q9BY42 306 aaPredicted RBP18.7■□□□□ 0.58
PFDN6-204ENST00000395131 ABCC12Q96J65 1359 aa18.69■□□□□ 0.58
PFDN6-204ENST00000395131 PIP4K2AP48426 406 aaPredicted RBP18.69■□□□□ 0.58
PFDN6-204ENST00000395131 TNIP1Q15025 636 aa18.69■□□□□ 0.58
PFDN6-204ENST00000395131 NOM1Q5C9Z4 860 aaKnown RBP18.69■□□□□ 0.58
PFDN6-204ENST00000395131 FBXO46Q6PJ61 603 aaPredicted RBP18.69■□□□□ 0.58
PFDN6-204ENST00000395131 DLK2Q6UY11 383 aa18.69■□□□□ 0.58
PFDN6-204ENST00000395131 RPGRQ92834 1020 aaKnown RBP18.69■□□□□ 0.58
PFDN6-204ENST00000395131 BCL2L13Q9BXK5 485 aa18.69■□□□□ 0.58
PFDN6-204ENST00000395131 NYXQ9GZU5 481 aa18.69■□□□□ 0.58
PFDN6-204ENST00000395131 CNOT7Q9UIV1 285 aaKnown RBP18.69■□□□□ 0.58
PFDN6-204ENST00000395131 NUP98P52948 1817 aa18.68■□□□□ 0.58
PFDN6-204ENST00000395131 PPEF1O14829 653 aaPredicted RBP18.68■□□□□ 0.58
PFDN6-204ENST00000395131 HLFQ16534 295 aa18.68■□□□□ 0.58
PFDN6-204ENST00000395131 HDAC9Q9UKV0 1011 aa18.68■□□□□ 0.58
PFDN6-204ENST00000395131 MKI67P46013 3256 aaKnown RBP18.68■□□□□ 0.58
PFDN6-204ENST00000395131 SLC51AQ86UW1 340 aa18.67■□□□□ 0.58
PFDN6-204ENST00000395131 SUPT20HQ8NEM7 779 aa18.67■□□□□ 0.58
PFDN6-204ENST00000395131 ZNF296Q8WUU4 475 aaPredicted RBP18.67■□□□□ 0.58
PFDN6-204ENST00000395131 RBM17Q96I25 401 aaKnown RBP18.67■□□□□ 0.58
PFDN6-204ENST00000395131 CEMIPQ8WUJ3 1361 aa18.67■□□□□ 0.58
PFDN6-204ENST00000395131 RBBP6Q7Z6E9 1792 aaKnown RBP18.66■□□□□ 0.58
PFDN6-204ENST00000395131 GNAT3A8MTJ3 354 aa18.66■□□□□ 0.58
PFDN6-204ENST00000395131 NBPF26B4DH59 902 aa18.66■□□□□ 0.58
PFDN6-204ENST00000395131 H7C1D1 291 aa18.66■□□□□ 0.58
PFDN6-204ENST00000395131 KCNQ3O43525 872 aa18.66■□□□□ 0.58
PFDN6-204ENST00000395131 NBPF10Q6P3W6 841 aaKnown RBP18.66■□□□□ 0.58
PFDN6-204ENST00000395131 NUTM1Q86Y26 1132 aa18.66■□□□□ 0.58
PFDN6-204ENST00000395131 ATP6V0A2Q9Y487 856 aa18.66■□□□□ 0.58
PFDN6-204ENST00000395131 KRT26Q7Z3Y9 468 aa18.65■□□□□ 0.58
PFDN6-204ENST00000395131 DPF2Q92785 391 aa18.65■□□□□ 0.58
PFDN6-204ENST00000395131 PANK3Q9H999 370 aa18.65■□□□□ 0.58
PFDN6-204ENST00000395131 IBTKQ9P2D0 1353 aaPredicted RBP18.65■□□□□ 0.58
PFDN6-204ENST00000395131 KIAA2012Q0VF49 1180 aa18.64■□□□□ 0.57
PFDN6-204ENST00000395131 SHTN1A0MZ66 631 aa18.63■□□□□ 0.57
PFDN6-204ENST00000395131 PRAMEF22A3QJZ6 481 aa18.63■□□□□ 0.57
PFDN6-204ENST00000395131 BTBD11A6QL63 1104 aa18.63■□□□□ 0.57
PFDN6-204ENST00000395131 DLL1O00548 723 aa18.63■□□□□ 0.57
PFDN6-204ENST00000395131 RAD17O75943 681 aa18.63■□□□□ 0.57
PFDN6-204ENST00000395131 SNRPA1P09661 255 aaKnown RBP18.63■□□□□ 0.57
PFDN6-204ENST00000395131 MICALL2Q8IY33 904 aa18.63■□□□□ 0.57
PFDN6-204ENST00000395131 TMX4Q9H1E5 349 aaPredicted RBP18.63■□□□□ 0.57
PFDN6-204ENST00000395131 TCERG1O14776 1098 aaKnown RBP18.62■□□□□ 0.57
PFDN6-204ENST00000395131 RASAL3Q86YV0 1011 aa18.62■□□□□ 0.57
PFDN6-204ENST00000395131 GAS2L2Q8NHY3 880 aa18.62■□□□□ 0.57
PFDN6-204ENST00000395131 ERVV-1B6SEH8 477 aa18.61■□□□□ 0.57
PFDN6-204ENST00000395131 SAMD7Q7Z3H4 446 aa18.61■□□□□ 0.57
PFDN6-204ENST00000395131 DCPSQ96C86 337 aaKnown RBP18.61■□□□□ 0.57
PFDN6-204ENST00000395131 ADM5C9JUS6 153 aa18.6■□□□□ 0.57
PFDN6-204ENST00000395131 TBC1D8O95759 1140 aa18.6■□□□□ 0.57
PFDN6-204ENST00000395131 INTS3Q68E01 1043 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms