RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 PDRG1Q9NUG6 133 aa19.08■□□□□ 0.65
SMARCD1-202ENST00000394963 BABAM1Q9NWV8 329 aa19.08■□□□□ 0.65
SMARCD1-202ENST00000394963 CYP46A1Q9Y6A2 500 aa19.08■□□□□ 0.65
SMARCD1-202ENST00000394963 ADCY9O60503 1353 aa19.08■□□□□ 0.65
SMARCD1-202ENST00000394963 PTMAP06454 111 aaKnown RBP19.08■□□□□ 0.64
SMARCD1-202ENST00000394963 MPHOSPH8Q99549 860 aa19.08■□□□□ 0.64
SMARCD1-202ENST00000394963 IL25Q9H293 177 aa19.08■□□□□ 0.64
SMARCD1-202ENST00000394963 LRRC24Q50LG9 513 aa19.07■□□□□ 0.64
SMARCD1-202ENST00000394963 IBTKQ9P2D0 1353 aaPredicted RBP19.07■□□□□ 0.64
SMARCD1-202ENST00000394963 RNF20Q5VTR2 975 aa19.07■□□□□ 0.64
SMARCD1-202ENST00000394963 VPS37DQ86XT2 251 aa19.07■□□□□ 0.64
SMARCD1-202ENST00000394963 FBXW7Q969H0 707 aa19.07■□□□□ 0.64
SMARCD1-202ENST00000394963 PIGBQ92521 554 aa19.06■□□□□ 0.64
SMARCD1-202ENST00000394963 CCDC158Q5M9N0 1113 aa19.06■□□□□ 0.64
SMARCD1-202ENST00000394963 RBM27Q9P2N5 1060 aaKnown RBP19.06■□□□□ 0.64
SMARCD1-202ENST00000394963 SNAP23O00161 211 aa19.06■□□□□ 0.64
SMARCD1-202ENST00000394963 PTH1RQ03431 593 aa19.06■□□□□ 0.64
SMARCD1-202ENST00000394963 SASH1O94885 1247 aa19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 RRP12Q5JTH9 1297 aaKnown RBP19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 FAM184AQ8NB25 1140 aa19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 RBM8AQ9Y5S9 174 aaKnown RBP19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 H3BQV1 296 aa19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 IFFO2Q5TF58 517 aa19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 BLOC1S2Q6QNY1 142 aa19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 NRKQ7Z2Y5 1582 aa19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 PLBD2Q8NHP8 589 aa19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 ABCF2Q9UG63 623 aa19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 MTMR7Q9Y216 660 aa19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 ATP10DQ9P241 1426 aa19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 NBPF26B4DH59 902 aa19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 SLC4A8Q2Y0W8 1093 aa19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 NBPF14Q5TI25 921 aa19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 NBPF10Q6P3W6 841 aaKnown RBP19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 NBPF15Q8N660 670 aa19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 EVI5LQ96CN4 794 aa19.05■□□□□ 0.64
SMARCD1-202ENST00000394963 L1TD1Q5T7N2 865 aaKnown RBP19.04■□□□□ 0.64
SMARCD1-202ENST00000394963 DZIP3Q86Y13 1208 aaKnown RBP19.04■□□□□ 0.64
SMARCD1-202ENST00000394963 PANK2Q9BZ23 570 aa19.04■□□□□ 0.64
SMARCD1-202ENST00000394963 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.04■□□□□ 0.64
SMARCD1-202ENST00000394963 RASEFQ8IZ41 740 aa19.04■□□□□ 0.64
SMARCD1-202ENST00000394963 ZBTB1Q9Y2K1 713 aa19.04■□□□□ 0.64
SMARCD1-202ENST00000394963 JAG2Q9Y219 1238 aa19.04■□□□□ 0.64
SMARCD1-202ENST00000394963 KIF24Q5T7B8 1368 aa19.03■□□□□ 0.64
SMARCD1-202ENST00000394963 GUCY1B3Q02153 619 aa19.03■□□□□ 0.64
SMARCD1-202ENST00000394963 CCT2P78371 535 aaKnown RBP19.03■□□□□ 0.64
SMARCD1-202ENST00000394963 BAG4O95429 457 aaKnown RBP19.02■□□□□ 0.64
SMARCD1-202ENST00000394963 KIF2CQ99661 725 aa19.02■□□□□ 0.64
SMARCD1-202ENST00000394963 AK2P54819 239 aa19.02■□□□□ 0.63
SMARCD1-202ENST00000394963 A0A0D9SFI3 127 aa19.01■□□□□ 0.63
SMARCD1-202ENST00000394963 TAF5LO75529 589 aa19.01■□□□□ 0.63
SMARCD1-202ENST00000394963 PI16Q6UXB8 463 aa19.01■□□□□ 0.63
SMARCD1-202ENST00000394963 TNNI3KQ59H18 835 aa19.01■□□□□ 0.63
SMARCD1-202ENST00000394963 FPGT-TNNI3KV9GXZ4 949 aa19.01■□□□□ 0.63
SMARCD1-202ENST00000394963 PDIA6Q15084 440 aa19.01■□□□□ 0.63
SMARCD1-202ENST00000394963 CARD10Q9BWT7 1032 aa19.01■□□□□ 0.63
SMARCD1-202ENST00000394963 A0A1B0GUL7 405 aa19■□□□□ 0.63
SMARCD1-202ENST00000394963 PEAK1Q9H792 1746 aa19■□□□□ 0.63
SMARCD1-202ENST00000394963 HLFQ16534 295 aa19■□□□□ 0.63
SMARCD1-202ENST00000394963 ANTXR1Q9H6X2 564 aa19■□□□□ 0.63
SMARCD1-202ENST00000394963 DBNLQ9UJU6 430 aaKnown RBP19■□□□□ 0.63
SMARCD1-202ENST00000394963 NIP7Q9Y221 180 aaKnown RBP eCLIP19■□□□□ 0.63
SMARCD1-202ENST00000394963 RGS12O14924 1447 aa19■□□□□ 0.63
SMARCD1-202ENST00000394963 CEMIPQ8WUJ3 1361 aa19■□□□□ 0.63
SMARCD1-202ENST00000394963 SGSM2O43147 1006 aa18.99■□□□□ 0.63
SMARCD1-202ENST00000394963 ADCK5Q3MIX3 580 aa18.99■□□□□ 0.63
SMARCD1-202ENST00000394963 FAM173BQ6P4H8 233 aa18.99■□□□□ 0.63
SMARCD1-202ENST00000394963 CCDC82Q8N4S0 544 aa18.99■□□□□ 0.63
SMARCD1-202ENST00000394963 SNX21Q969T3 373 aa18.99■□□□□ 0.63
SMARCD1-202ENST00000394963 IRS4O14654 1257 aaPredicted RBP18.99■□□□□ 0.63
SMARCD1-202ENST00000394963 GNL2Q13823 731 aaKnown RBP18.99■□□□□ 0.63
SMARCD1-202ENST00000394963 TNS3Q68CZ2 1445 aa18.99■□□□□ 0.63
SMARCD1-202ENST00000394963 TOM1O60784 492 aa18.98■□□□□ 0.63
SMARCD1-202ENST00000394963 LARP1BQ659C4 914 aaKnown RBP18.98■□□□□ 0.63
SMARCD1-202ENST00000394963 ISY1Q9ULR0 285 aaKnown RBP18.98■□□□□ 0.63
SMARCD1-202ENST00000394963 KCNQ2O43526 872 aa18.98■□□□□ 0.63
SMARCD1-202ENST00000394963 PI4K2BQ8TCG2 481 aa18.98■□□□□ 0.63
SMARCD1-202ENST00000394963 TFIP11Q9UBB9 837 aaKnown RBP18.98■□□□□ 0.63
SMARCD1-202ENST00000394963 MEGF6O75095 1541 aa18.98■□□□□ 0.63
SMARCD1-202ENST00000394963 SNX14Q9Y5W7 946 aa18.98■□□□□ 0.63
SMARCD1-202ENST00000394963 SYCE3A1L190 88 aa18.96■□□□□ 0.63
SMARCD1-202ENST00000394963 ANKRD18BA2A2Z9 1011 aa18.96■□□□□ 0.63
SMARCD1-202ENST00000394963 KAZALD1Q96I82 304 aa18.96■□□□□ 0.63
SMARCD1-202ENST00000394963 MST1RQ04912 1400 aa18.96■□□□□ 0.63
SMARCD1-202ENST00000394963 PTPN12Q05209 780 aaKnown RBP18.96■□□□□ 0.63
SMARCD1-202ENST00000394963 RALYLQ86SE5 291 aaKnown RBP18.96■□□□□ 0.63
SMARCD1-202ENST00000394963 CCDC144CPQ8IYA2 1237 aa18.96■□□□□ 0.63
SMARCD1-202ENST00000394963 DLG5Q8TDM6 1919 aa18.96■□□□□ 0.63
SMARCD1-202ENST00000394963 ITGA6P23229 1130 aa18.96■□□□□ 0.63
SMARCD1-202ENST00000394963 PSMA5P28066 241 aa18.96■□□□□ 0.63
SMARCD1-202ENST00000394963 POLA2Q14181 598 aa18.96■□□□□ 0.63
SMARCD1-202ENST00000394963 ERVV-2B6SEH9 535 aa18.95■□□□□ 0.62
SMARCD1-202ENST00000394963 ADORA1P30542 326 aa18.95■□□□□ 0.62
SMARCD1-202ENST00000394963 CHAF1AQ13111 956 aaPredicted RBP18.95■□□□□ 0.62
SMARCD1-202ENST00000394963 ZNF589Q86UQ0 364 aaPredicted RBP18.95■□□□□ 0.62
SMARCD1-202ENST00000394963 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.95■□□□□ 0.623e-6■■□□□ 12.2
SMARCD1-202ENST00000394963 CPLX1O14810 134 aa18.95■□□□□ 0.62
SMARCD1-202ENST00000394963 NFXL1Q6ZNB6 911 aa18.95■□□□□ 0.62
SMARCD1-202ENST00000394963 BRF1Q92994 677 aa18.95■□□□□ 0.62
SMARCD1-202ENST00000394963 LIMCH1Q9UPQ0 1083 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms