RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 PLCH1Q4KWH8 1693 aa24.83■■□□□ 1.57
PRKCD-202ENST00000394729 TNS2Q63HR2 1409 aa24.83■■□□□ 1.57
PRKCD-202ENST00000394729 LOC102724428A0A0B4J2F2 783 aa24.83■■□□□ 1.57
PRKCD-202ENST00000394729 FRAT2O75474 233 aaPredicted RBP24.83■■□□□ 1.57
PRKCD-202ENST00000394729 CASP7P55210 303 aa24.83■■□□□ 1.57
PRKCD-202ENST00000394729 SIK1P57059 783 aa24.83■■□□□ 1.57
PRKCD-202ENST00000394729 TIMM10P62072 90 aa24.83■■□□□ 1.57
PRKCD-202ENST00000394729 FOXO4P98177 505 aa24.83■■□□□ 1.57
PRKCD-202ENST00000394729 TCIRG1Q13488 830 aa24.83■■□□□ 1.57
PRKCD-202ENST00000394729 ITPK1Q13572 414 aa24.83■■□□□ 1.57
PRKCD-202ENST00000394729 ESYT1Q9BSJ8 1104 aa24.82■■□□□ 1.56
PRKCD-202ENST00000394729 STAP2Q9UGK3 403 aa24.82■■□□□ 1.56
PRKCD-202ENST00000394729 ECHDC1Q9NTX5 307 aa24.82■■□□□ 1.56
PRKCD-202ENST00000394729 ITGB4P16144 1822 aa24.82■■□□□ 1.56
PRKCD-202ENST00000394729 AFDNP55196 1824 aaKnown RBP24.82■■□□□ 1.56
PRKCD-202ENST00000394729 PALD1Q9ULE6 856 aa24.81■■□□□ 1.56
PRKCD-202ENST00000394729 DNAJC2Q99543 621 aaKnown RBP24.81■■□□□ 1.56
PRKCD-202ENST00000394729 H7C1W4 665 aa24.81■■□□□ 1.56
PRKCD-202ENST00000394729 CRKLP46109 303 aaKnown RBP24.81■■□□□ 1.56
PRKCD-202ENST00000394729 RFX5P48382 616 aaPredicted RBP24.8■■□□□ 1.56
PRKCD-202ENST00000394729 NFKBIBQ15653 356 aa24.8■■□□□ 1.56
PRKCD-202ENST00000394729 ERBB4Q15303 1308 aa24.8■■□□□ 1.56
PRKCD-202ENST00000394729 ARFGEF2Q9Y6D5 1785 aa24.8■■□□□ 1.56
PRKCD-202ENST00000394729 REC8O95072 547 aa24.8■■□□□ 1.56
PRKCD-202ENST00000394729 ERC1Q8IUD2 1116 aa24.8■■□□□ 1.56
PRKCD-202ENST00000394729 CCDC191Q8NCU4 936 aa24.8■■□□□ 1.56
PRKCD-202ENST00000394729 DBNDD2Q9BQY9 259 aa24.8■■□□□ 1.56
PRKCD-202ENST00000394729 BICDL1Q6ZP65 573 aa24.79■■□□□ 1.56
PRKCD-202ENST00000394729 TEX13AQ9BXU3 409 aaPredicted RBP24.79■■□□□ 1.56
PRKCD-202ENST00000394729 TRMT112Q9UI30 125 aaKnown RBP24.79■■□□□ 1.56
PRKCD-202ENST00000394729 DTNBO60941 627 aa24.79■■□□□ 1.56
PRKCD-202ENST00000394729 CNTROBQ8N137 903 aa24.79■■□□□ 1.56
PRKCD-202ENST00000394729 UPF3BQ9BZI7 483 aaKnown RBP24.79■■□□□ 1.56
PRKCD-202ENST00000394729 N4BP2Q86UW6 1770 aaPredicted RBP24.78■■□□□ 1.56
PRKCD-202ENST00000394729 TAF7LQ5H9L4 462 aa24.78■■□□□ 1.56
PRKCD-202ENST00000394729 CERKQ8TCT0 537 aa24.78■■□□□ 1.56
PRKCD-202ENST00000394729 LARP6Q9BRS8 491 aaKnown RBP24.78■■□□□ 1.56
PRKCD-202ENST00000394729 DBNLQ9UJU6 430 aaKnown RBP24.78■■□□□ 1.56
PRKCD-202ENST00000394729 THRAP3Q9Y2W1 955 aaKnown RBP24.78■■□□□ 1.56
PRKCD-202ENST00000394729 MAP3K15Q6ZN16 1313 aa24.78■■□□□ 1.56
PRKCD-202ENST00000394729 SLFNL1Q499Z3 407 aa24.77■■□□□ 1.56
PRKCD-202ENST00000394729 VSIG10Q8N0Z9 540 aa24.77■■□□□ 1.56
PRKCD-202ENST00000394729 GLRX3O76003 335 aaKnown RBP24.77■■□□□ 1.56
PRKCD-202ENST00000394729 COL22A1Q8NFW1 1626 aaPredicted RBP24.77■■□□□ 1.56
PRKCD-202ENST00000394729 PLEKHG2Q9H7P9 1386 aa24.77■■□□□ 1.56
PRKCD-202ENST00000394729 HCLS1P14317 486 aaPredicted RBP24.76■■□□□ 1.55
PRKCD-202ENST00000394729 PALLDQ8WX93 1383 aa24.76■■□□□ 1.55
PRKCD-202ENST00000394729 JCADQ9P266 1359 aa24.76■■□□□ 1.55
PRKCD-202ENST00000394729 GPATCH3Q96I76 525 aa24.76■■□□□ 1.55
PRKCD-202ENST00000394729 DIAPH3Q9NSV4 1193 aa24.76■■□□□ 1.55
PRKCD-202ENST00000394729 BCL9LQ86UU0 1499 aa24.76■■□□□ 1.55
PRKCD-202ENST00000394729 CCDC57Q2TAC2 916 aa24.76■■□□□ 1.55
PRKCD-202ENST00000394729 GIGYF2Q6Y7W6 1299 aaKnown RBP24.76■■□□□ 1.55
PRKCD-202ENST00000394729 FAM227BQ96M60 508 aa24.76■■□□□ 1.55
PRKCD-202ENST00000394729 CDCA7Q9BWT1 371 aaPredicted RBP24.76■■□□□ 1.55
PRKCD-202ENST00000394729 UBR2Q8IWV8 1755 aa24.75■■□□□ 1.55
PRKCD-202ENST00000394729 RABL6Q3YEC7 729 aaPredicted RBP24.75■■□□□ 1.55
PRKCD-202ENST00000394729 TNNI3KQ59H18 835 aa24.75■■□□□ 1.55
PRKCD-202ENST00000394729 CCDC24Q8N4L8 307 aa24.75■■□□□ 1.55
PRKCD-202ENST00000394729 ISCA1Q9BUE6 129 aa24.75■■□□□ 1.55
PRKCD-202ENST00000394729 FPGT-TNNI3KV9GXZ4 949 aa24.75■■□□□ 1.55
PRKCD-202ENST00000394729 DOT1LQ8TEK3 1739 aa24.75■■□□□ 1.55
PRKCD-202ENST00000394729 SLIT2O94813 1529 aa24.74■■□□□ 1.55
PRKCD-202ENST00000394729 FSD1Q9BTV5 496 aa24.74■■□□□ 1.55
PRKCD-202ENST00000394729 COPRSQ9NQ92 184 aa24.74■■□□□ 1.55
PRKCD-202ENST00000394729 DDX46Q7L014 1031 aaKnown RBP24.74■■□□□ 1.55
PRKCD-202ENST00000394729 NLRP10Q86W26 655 aa24.74■■□□□ 1.55
PRKCD-202ENST00000394729 INTS5Q6P9B9 1019 aaKnown RBP24.73■■□□□ 1.55
PRKCD-202ENST00000394729 LAMB4A4D0S4 1761 aa24.73■■□□□ 1.55
PRKCD-202ENST00000394729 NEK4P51957 841 aa24.73■■□□□ 1.55
PRKCD-202ENST00000394729 CCDC87Q9NVE4 849 aa24.73■■□□□ 1.55
PRKCD-202ENST00000394729 GREM2Q9H772 168 aa24.72■■□□□ 1.55
PRKCD-202ENST00000394729 UBN2Q6ZU65 1347 aa24.72■■□□□ 1.55
PRKCD-202ENST00000394729 SNRKQ9NRH2 765 aa24.72■■□□□ 1.55
PRKCD-202ENST00000394729 LRP6O75581 1613 aa24.72■■□□□ 1.55
PRKCD-202ENST00000394729 BARGINQ6ZT62 677 aa24.71■■□□□ 1.55
PRKCD-202ENST00000394729 SNAP23O00161 211 aa24.71■■□□□ 1.55
PRKCD-202ENST00000394729 CPA1P15085 419 aa24.71■■□□□ 1.55
PRKCD-202ENST00000394729 HELBQ8NG08 1087 aaPredicted RBP24.71■■□□□ 1.55
PRKCD-202ENST00000394729 IRS4O14654 1257 aaPredicted RBP24.71■■□□□ 1.55
PRKCD-202ENST00000394729 VPS72Q15906 364 aa24.71■■□□□ 1.55
PRKCD-202ENST00000394729 ATG9AQ7Z3C6 839 aa24.71■■□□□ 1.55
PRKCD-202ENST00000394729 AFF2P51816 1311 aa24.7■■□□□ 1.55
PRKCD-202ENST00000394729 TTC41PQ6P2S7 1318 aa24.69■■□□□ 1.54
PRKCD-202ENST00000394729 ZBTB38Q8NAP3 1195 aaPredicted RBP24.69■■□□□ 1.54
PRKCD-202ENST00000394729 PHF14O94880 888 aa24.68■■□□□ 1.54
PRKCD-202ENST00000394729 ANTXR1Q9H6X2 564 aa24.68■■□□□ 1.54
PRKCD-202ENST00000394729 PTH1RQ03431 593 aa24.68■■□□□ 1.54
PRKCD-202ENST00000394729 IFIT5Q13325 482 aaKnown RBP24.68■■□□□ 1.54
PRKCD-202ENST00000394729 KIAA1211Q6ZU35 1233 aa24.68■■□□□ 1.54
PRKCD-202ENST00000394729 LINC00116Q8NCU8 138 aa24.68■■□□□ 1.54
PRKCD-202ENST00000394729 NIP7Q9Y221 180 aaKnown RBP eCLIP24.68■■□□□ 1.54
PRKCD-202ENST00000394729 PAPPAQ13219 1627 aa24.68■■□□□ 1.54
PRKCD-202ENST00000394729 ITGA6P23229 1130 aa24.67■■□□□ 1.54
PRKCD-202ENST00000394729 SUSD4Q5VX71 490 aa24.67■■□□□ 1.54
PRKCD-202ENST00000394729 K7ELQ4 463 aaPredicted RBP24.67■■□□□ 1.54
PRKCD-202ENST00000394729 IL6STP40189 918 aaPredicted RBP24.67■■□□□ 1.54
PRKCD-202ENST00000394729 NMIQ13287 307 aaPredicted RBP24.67■■□□□ 1.54
PRKCD-202ENST00000394729 SEC62Q99442 399 aaKnown RBP24.67■■□□□ 1.54
PRKCD-202ENST00000394729 ADORA1P30542 326 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms