RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 ELL2O00472 640 aaPredicted RBP11.03□□□□□ -0.64
APLF-202ENST00000394342 AIMP1Q12904 312 aaKnown RBP11.03□□□□□ -0.64
APLF-202ENST00000394342 TSPYL6Q8N831 410 aa11.03□□□□□ -0.64
APLF-202ENST00000394342 MYH16Q9H6N6 1097 aa11.03□□□□□ -0.64
APLF-202ENST00000394342 WWC3Q9ULE0 1092 aa11.03□□□□□ -0.64
APLF-202ENST00000394342 TIAM2Q8IVF5 1701 aa11.03□□□□□ -0.64
APLF-202ENST00000394342 UBN2Q6ZU65 1347 aa11.03□□□□□ -0.64
APLF-202ENST00000394342 ZNF521Q96K83 1311 aa11.03□□□□□ -0.64
APLF-202ENST00000394342 GPTP24298 496 aa11.02□□□□□ -0.65
APLF-202ENST00000394342 GOLGA2Q08379 1002 aa11.02□□□□□ -0.65
APLF-202ENST00000394342 TWISTNBQ3B726 338 aaPredicted RBP11.02□□□□□ -0.65
APLF-202ENST00000394342 PPP1R42Q7Z4L9 355 aa11.02□□□□□ -0.65
APLF-202ENST00000394342 CCDC24Q8N4L8 307 aa11.02□□□□□ -0.65
APLF-202ENST00000394342 TTLL6Q8N841 843 aa11.02□□□□□ -0.65
APLF-202ENST00000394342 PLBD2Q8NHP8 589 aa11.02□□□□□ -0.65
APLF-202ENST00000394342 RNF123Q5XPI4 1314 aa11.02□□□□□ -0.65
APLF-202ENST00000394342 SPEF2Q9C093 1822 aa11.01□□□□□ -0.65
APLF-202ENST00000394342 KLRG2A4D1S0 409 aaPredicted RBP11.01□□□□□ -0.65
APLF-202ENST00000394342 FAM177BA6PVY3 158 aa11.01□□□□□ -0.65
APLF-202ENST00000394342 NTSR2O95665 410 aa11.01□□□□□ -0.65
APLF-202ENST00000394342 GTF2E1P29083 439 aaPredicted RBP11.01□□□□□ -0.65
APLF-202ENST00000394342 TCIRG1Q13488 830 aa11.01□□□□□ -0.65
APLF-202ENST00000394342 SUSD4Q5VX71 490 aa11.01□□□□□ -0.65
APLF-202ENST00000394342 STYK1Q6J9G0 422 aa11.01□□□□□ -0.65
APLF-202ENST00000394342 ANKRD13DQ6ZTN6 518 aa11.01□□□□□ -0.65
APLF-202ENST00000394342 STK31Q9BXU1 1019 aa11.01□□□□□ -0.65
APLF-202ENST00000394342 ABCC12Q96J65 1359 aa11.01□□□□□ -0.65
APLF-202ENST00000394342 SRGNP10124 158 aa11□□□□□ -0.65
APLF-202ENST00000394342 MIER1Q8N108 512 aa11□□□□□ -0.65
APLF-202ENST00000394342 CNKSR1Q969H4 720 aa11□□□□□ -0.65
APLF-202ENST00000394342 ZNF622Q969S3 477 aaKnown RBP eCLIP11□□□□□ -0.65
APLF-202ENST00000394342 MASTLQ96GX5 879 aa11□□□□□ -0.65
APLF-202ENST00000394342 UTP14AQ9BVJ6 771 aaKnown RBP11□□□□□ -0.65
APLF-202ENST00000394342 DDX58O95786 925 aaKnown RBP10.99□□□□□ -0.65
APLF-202ENST00000394342 NPR1P16066 1061 aa10.99□□□□□ -0.65
APLF-202ENST00000394342 EXOSC9Q06265 439 aaKnown RBP10.99□□□□□ -0.65
APLF-202ENST00000394342 ERFEQ4G0M1 354 aa10.99□□□□□ -0.65
APLF-202ENST00000394342 ARHGAP27Q6ZUM4 889 aa10.99□□□□□ -0.65
APLF-202ENST00000394342 NLRP10Q86W26 655 aa10.99□□□□□ -0.65
APLF-202ENST00000394342 NUTM1Q86Y26 1132 aa10.99□□□□□ -0.65
APLF-202ENST00000394342 ISCA1Q9BUE6 129 aa10.99□□□□□ -0.65
APLF-202ENST00000394342 PHAXQ9H814 394 aaKnown RBP10.99□□□□□ -0.65
APLF-202ENST00000394342 SPDYE4A6NLX3 237 aa10.98□□□□□ -0.65
APLF-202ENST00000394342 E9PSI1 815 aa10.98□□□□□ -0.65
APLF-202ENST00000394342 VAMP4O75379 141 aa10.98□□□□□ -0.65
APLF-202ENST00000394342 TRIM28Q13263 835 aaKnown RBP10.98□□□□□ -0.65
APLF-202ENST00000394342 CRY2Q49AN0 593 aa10.98□□□□□ -0.65
APLF-202ENST00000394342 RIC3Q7Z5B4 369 aa10.98□□□□□ -0.65
APLF-202ENST00000394342 ADCY9O60503 1353 aa10.98□□□□□ -0.65
APLF-202ENST00000394342 LRRC37AA6NMS7 1700 aa10.98□□□□□ -0.65
APLF-202ENST00000394342 SLC10A5Q5PT55 438 aa10.97□□□□□ -0.65
APLF-202ENST00000394342 SOGA3Q5TF21 947 aa10.97□□□□□ -0.65
APLF-202ENST00000394342 SH3TC1Q8TE82 1336 aa10.96□□□□□ -0.65
APLF-202ENST00000394342 ALDH1B1P30837 517 aa10.96□□□□□ -0.65
APLF-202ENST00000394342 PRPF40BQ6NWY9 871 aaKnown RBP10.96□□□□□ -0.65
APLF-202ENST00000394342 KSR2Q6VAB6 950 aa10.96□□□□□ -0.65
APLF-202ENST00000394342 NLRP3Q96P20 1036 aa10.96□□□□□ -0.65
APLF-202ENST00000394342 TRMT112Q9UI30 125 aaKnown RBP10.96□□□□□ -0.65
APLF-202ENST00000394342 FBXO3Q9UK99 471 aa10.96□□□□□ -0.65
APLF-202ENST00000394342 ATP5J2-PTCD1G3V325 749 aa10.95□□□□□ -0.66
APLF-202ENST00000394342 TCERG1O14776 1098 aaKnown RBP10.95□□□□□ -0.66
APLF-202ENST00000394342 HOXA10P31260 410 aaPredicted RBP10.95□□□□□ -0.66
APLF-202ENST00000394342 SLFN5Q08AF3 891 aa10.95□□□□□ -0.66
APLF-202ENST00000394342 FLIIQ13045 1269 aa10.95□□□□□ -0.66
APLF-202ENST00000394342 ZNF784Q8NCA9 323 aaPredicted RBP10.95□□□□□ -0.66
APLF-202ENST00000394342 CCDC191Q8NCU4 936 aa10.95□□□□□ -0.66
APLF-202ENST00000394342 RPGRQ92834 1020 aaKnown RBP10.95□□□□□ -0.66
APLF-202ENST00000394342 RBM17Q96I25 401 aaKnown RBP10.95□□□□□ -0.66
APLF-202ENST00000394342 MYD88Q99836 296 aa10.95□□□□□ -0.66
APLF-202ENST00000394342 METTL22Q9BUU2 404 aaPredicted RBP10.95□□□□□ -0.66
APLF-202ENST00000394342 MAP3K2Q9Y2U5 619 aa10.95□□□□□ -0.66
APLF-202ENST00000394342 PI4KAP2A4QPH2 592 aa10.94□□□□□ -0.66
APLF-202ENST00000394342 C21orf2O43822 256 aa10.94□□□□□ -0.66
APLF-202ENST00000394342 G2E3Q7L622 706 aa10.94□□□□□ -0.66
APLF-202ENST00000394342 PI4KAP1Q8N8J0 262 aa10.94□□□□□ -0.66
APLF-202ENST00000394342 CRAMP1Q96RY5 1269 aa10.94□□□□□ -0.66
APLF-202ENST00000394342 CWC25Q9NXE8 425 aaPredicted RBP10.94□□□□□ -0.66
APLF-202ENST00000394342 LTBP3Q9NS15 1303 aa10.93□□□□□ -0.66
APLF-202ENST00000394342 HCLS1P14317 486 aaPredicted RBP10.93□□□□□ -0.66
APLF-202ENST00000394342 HSP90B1P14625 803 aaKnown RBP10.93□□□□□ -0.66
APLF-202ENST00000394342 LMNB1P20700 586 aa10.93□□□□□ -0.66
APLF-202ENST00000394342 RASSF7Q02833 373 aa10.93□□□□□ -0.66
APLF-202ENST00000394342 NEXNQ0ZGT2 675 aa10.93□□□□□ -0.66
APLF-202ENST00000394342 FKBP5Q13451 457 aaPredicted RBP10.93□□□□□ -0.66
APLF-202ENST00000394342 CCDC93Q567U6 631 aa10.93□□□□□ -0.66
APLF-202ENST00000394342 C9orf131Q5VYM1 1079 aa10.93□□□□□ -0.66
APLF-202ENST00000394342 C3orf67Q6ZVT6 689 aa10.93□□□□□ -0.66
APLF-202ENST00000394342 TRMT2AQ8IZ69 625 aaKnown RBP10.93□□□□□ -0.66
APLF-202ENST00000394342 SYNE4Q8N205 404 aa10.93□□□□□ -0.66
APLF-202ENST00000394342 ZBTB38Q8NAP3 1195 aaPredicted RBP10.93□□□□□ -0.66
APLF-202ENST00000394342 C7orf43Q8WVR3 580 aa10.93□□□□□ -0.66
APLF-202ENST00000394342 ZNF428Q96B54 188 aa10.93□□□□□ -0.66
APLF-202ENST00000394342 ZBTB12Q9Y330 459 aaPredicted RBP10.93□□□□□ -0.66
APLF-202ENST00000394342 SCN4AP35499 1836 aa10.93□□□□□ -0.66
APLF-202ENST00000394342 A0A1B0GUL6 1792 aa10.93□□□□□ -0.66
APLF-202ENST00000394342 ZC3H4Q9UPT8 1303 aaKnown RBP10.92□□□□□ -0.66
APLF-202ENST00000394342 NFKBIEO00221 500 aa10.92□□□□□ -0.66
APLF-202ENST00000394342 PCCAP05165 728 aaPredicted RBP10.92□□□□□ -0.66
APLF-202ENST00000394342 FAM89AQ96GI7 184 aa10.92□□□□□ -0.66
APLF-202ENST00000394342 TAOK3Q9H2K8 898 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms